ID: uc003qhf.1_intron_0_0_chr6_137301900_r.3p
GENE: (1)
chr6:137301850-137302099-


(1)
B-CELL
(1)
BRAIN
(5)
CELL-LINE
(3)
LIVER
(2)
OTHER
(2)
SKIN

Sense strand
AAAAACACCCCGGCATGGGGCTGGCTCCATGGGGACCATAGTTTGTCACTCTGAGCCTCCTCATTACCTCCTAAGACTATAGTTTCCTAATCCTAAAATCCCGGTAATTTTGCTGATCTTTTCTGTTAGTGATTTGAGAAATGCATTTCAGGGCTTTGTTTTGCATGTAAAATAAAGCTGCTTTTTTTTTTTTTTTTAAGAGATGGGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCAGGATTGCA
.............................................................................................................((((((((.......)))))))).((((((((........((((((((((((((....)))))))))))).)).........))))))))...................................................
..............................................................................................95.......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR390723(GSM850202)
total small RNA. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
................................................................................................................................................................................GCTGCTTTTTTTTTTTTTTTTATC..................................................242.000.001.001.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTATT....................................................232.000.002.00-------------
............................ATGGGGACCATAGTTATT............................................................................................................................................................................................................182.000.00---2.00----------
..............................................................................................................................................................................AAGCTGCTTTTTTTTTTTTTTCTAG...................................................252.000.002.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTCT...................................................242.000.002.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTC....................................................232.000.001.001.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTAG...................................................242.000.002.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTCGAG.................................................262.000.001.00-1.00-----------
...............................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCAGGGGA...242.000.00-2.00------------
...........................................................................................................................................................................................................................ACCCAGGCTGGAGTGCAGTGGCAGGACGTC.302.000.002.00-------------
..............................................................................................................................................................................AAGCTGCTTTTTTTTTTTTTTCTCC...................................................251.000.00-1.00------------
.....................................................................................................................................................AGGGCTTTGTTTTGCG.....................................................................................161.000.00-1.00------------
................................................................................................................................................................................GCTGCTTTTTTTTTTTTTTTATC...................................................231.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTATAC..................................................251.000.001.00-------------
....................................................................................................................................................CAGGGCTTTGTTTTGCGT....................................................................................181.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTCTAG...................................................241.000.001.00-------------
..............................................................................................................................................................................................................................CAGGCTGGAGTGCAGTGGCAGGTGGG..261.000.00-----------1.00--
.................................................................................................................................................................................................................................GCTGGAGTGCAGTGGCAGGGAA...221.000.00----1.00---------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTGAG......................................................211.000.001.00-------------
............................................................................................................................................................................................................................CCCAGGCTGGAGTGCAGTGGCAGGGAC...271.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTCGGC......................................................211.000.001.00-------------
..............................................................................................................................................................................................................................CAGGCTGGAGTGCAGTGGCAGGGATT..261.000.00----------1.00---
...........................................................................................................................................................................................................................ACCCAGGCTGGAGTGCAGTGGCAGGGGGT..291.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTGTTT..................................................251.000.001.00-------------
.........................................................................................................................................................................................................................TCACCCAGGCTGGAGTGCAGTGGCAGGTTCC..311.000.00--1.00-----------
........................................................................................................................................................................................................AGATGGGTCTTGCTCGC.................................171.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTCAGG...................................................241.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTCGG.......................................................201.000.001.00-------------
.........................................................................................................................................................................................................................TCACCCAGGCTGGAGTGCAGTGGCAGATAT...301.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTATT...................................................241.000.001.00-------------
...............................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCAGGA.....2201.001.00--------1.00-----
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTCAGC......................................................211.000.001.00-------------
...............................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCAGGGTA...241.000.00----1.00---------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTATG......................................................211.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTCTT..................................................251.000.001.00-------------
..............................................................................................................................................................................AAGCTGCTTTTTTTTTTTTTAG......................................................221.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTAGA.....................................................221.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTAGG........................................................191.000.001.00-------------
................................................................................................................................................................................GCTGCTTTTTTTTTTTCGAT......................................................201.000.00-------1.00------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTAG......................................................211.000.001.00-------------
.................................................................................................................................................................................................................................GCTGGAGTGCAGTGGCAGGGC....211.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTGCC..................................................251.000.001.00-------------
...................................................................................................CCCGGTAATTTTGCTCGTC....................................................................................................................................191.000.00---------1.00----
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTCCCG.................................................261.000.00--1.00-----------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTAGC..................................................251.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTGGT...................................................241.000.001.00-------------
.................................................................................................................................................................................CTGCTTTTTTTTTTTTTTTTAGAGC................................................251.000.001.00-------------
.............................................................................................TAAAATCCCGGTAATATTT..........................................................................................................................................191.000.00-----1.00--------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTAACT...................................................241.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTAG.......................................................201.000.001.00-------------
..................................................................................................................................................................................................................TGCTCTGTCACCCAGGCTGGAGTGCAGGGGA.........311.000.001.00-------------
......................................................................................................................................................................................................AGAGATGGGTCTTGCTCTGTTACC............................241.000.00-1.00------------
...............................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCAGGGGCC..251.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTGGA.....................................................221.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTGT...................................................241.000.001.00-------------
................................................................................................................................................................................GCTGCTTTTTTTTTTTTTTTTATAGT................................................261.000.00------------1.00-
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTCTAG......................................................211.000.001.00-------------
...............................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCAGGGCAC..251.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTCCCC....................................................231.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTCCTC...................................................241.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTCTGG..................................................251.000.001.00-------------
..............................................................................................................................................................................AAGCTGCTTTTTTTTTTTTTTTTCC...................................................251.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTAGC......................................................211.000.00-1.00------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTCCC....................................................231.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTTCTTT.................................................261.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTCAG.......................................................201.000.001.00-------------
...............................................................................................................................................................................AGCTGCTTTTTTTTTTTTTTTCGG...................................................241.000.001.00-------------
.....................................................................................................................................................................................................AAGAGATGGGTCTTGCTCT..................................1980.120.12-------------0.12

Antisense strand
AAAAACACCCCGGCATGGGGCTGGCTCCATGGGGACCATAGTTTGTCACTCTGAGCCTCCTCATTACCTCCTAAGACTATAGTTTCCTAATCCTAAAATCCCGGTAATTTTGCTGATCTTTTCTGTTAGTGATTTGAGAAATGCATTTCAGGGCTTTGTTTTGCATGTAAAATAAAGCTGCTTTTTTTTTTTTTTTTAAGAGATGGGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCAGGATTGCA
.............................................................................................................((((((((.......)))))))).((((((((........((((((((((((((....)))))))))))).)).........))))))))...................................................
..............................................................................................95.......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR390723(GSM850202)
total small RNA. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
................................................................................................................................................................................................................................GGCTGGAGTGCAGTGGCAGGATGGGC 263.000.003.00-------------
............................................................................................................................................................................................................GGGTCTTGCTCTGTCACCCAGGCTGGAGCCT............... 311.000.001.00-------------
................................................................................................................................................................................................................................GGCTGGAGTGCAGTGGCAGGAGGGC. 251.000.001.00-------------
................................................................................................................................................................................................................................GGCTGGAGTGCAGTGGCAGGATGGCA 261.000.001.00-------------
...........................................................................................................................................................................................................TGGGTCTTGCTCTGTCACCCAGGCTGGAGACCT.............. 331.000.001.00-------------
.....................................................AGCCTCCTCATTACCTGC................................................................................................................................................................................... 181.000.00------1.00-------
............................................................................................................................................................................TAAAGCTGCTTTTTTTGCCA.......................................................... 201.000.00--1.00-----------
.........................................................................................................................................................................................................ACTCCAGCCTGGGTGACAGAGCAAGACCCATC................. 3280.120.120.12-------------