ID: uc003qey.2_intron_4_0_chr6_135300407_r.3p
GENE: HBS1L(10)
chr6:135300357-135300606-


(1)
AGO1.ip 		(1)
AGO2.ip 		(20)
B-CELL 		(21)
BREAST 		(63)
CELL-LINE 		(1)
CERVIX 		(3)
FIBROBLAST 		(3)
HEART 		(5)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(37)
SKIN 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
AGGGTGGTATTCTAGAAGAGTCAGTTCTAGAGGAAGTGTGTTTTCCTCAACGCTCACAGTTACACTTCTTACTCTCAATCCATTCATATTGAAAATGATGAGTAGTGACTGATGAAGCACAAATCAGCCAAACTCTGTTGGTTGTTATGGTTTGATATCGAGGTGTTTCACTGTATGCTTTGGTTCTTACTCATTTCCAGGAATCACTCTGCATGATGAACCTGTCGACTGGGCGGCAGCAGGCGATCAT
...................................................((((((((((((((((.(((...(((((........)))))...))).)))).))))))).))).))....................................................................................................................................
..................................................51.................................................................118..................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037938(GSM510476)
293Red. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR038857(GSM458540)
D20. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR038853(GSM458536)
MELB. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191470(GSM715580)
118genomic small RNA (size selected RNA from . (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359174(GSM359174)
hela_5_1. (hela)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
..........................................................................................GAAAATGATGAGTAGTGACTGATG........................................................................................................................................2412038.002038.00629.0073.00100.0095.0082.0075.0061.0051.0054.0051.0041.0034.0037.0032.0026.0034.0026.0029.0027.0022.0021.0024.0019.0020.0021.0019.0014.0019.0016.0013.0011.00-12.0012.008.008.0012.0010.009.00-8.009.006.004.006.002.004.001.007.006.006.004.004.003.00-1.003.00-5.003.003.005.002.002.004.004.00-4.001.002.001.00-3.003.004.003.001.002.002.003.002.001.00-1.001.001.00----1.002.002.002.001.001.001.002.001.002.001.001.001.001.002.001.00-1.00---1.001.00-1.00-1.001.001.00-1.001.001.00-1.001.00----1.001.001.00-1.001.00-----1.001.00--1.001.001.00-1.001.001.00--1.001.001.00-1.001.00-1.00--1.00---
.........................................................................................TGAAAATGATGAGTAGTGACTGATG........................................................................................................................................251165.00165.005.0041.001.00---5.0010.00-9.00-7.004.006.001.00--4.004.003.005.002.003.001.001.00-1.00--3.001.00-2.002.002.003.00-2.001.00---1.001.002.00-3.00--1.001.00-2.001.00--2.00--1.00---1.00----2.00-------1.00----1.001.00-2.001.00---------1.00----1.00-1.00--1.00-1.00------------------1.00------1.00------1.00---1.00---1.00---1.00-------1.00-------
..........................................................................................GAAAATGATGAGTAGTGA..............................................................................................................................................18142.0042.001.00-------8.00-------5.00--------------14.00-------8.00---------------3.00--------------------------------2.00----------------------------------------------------------------1.00--------------
.........................................................................................TGAAAATGATGAGTAGTGACTGATGA.......................................................................................................................................26130.0030.001.00---9.00---9.002.00--1.00-1.00-----1.00-1.00----------------------------1.00-1.00--------1.00------------------1.00-----1.00--------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGAT.........................................................................................................................................23127.0027.0010.00-----1.001.002.00-4.00--1.001.00-----------2.00-------1.00-------1.001.00----------------1.00---1.00-------------------------------------------------------------------------------------------------------
...........................................................................................AAAATGATGAGTAGTGACTGATG........................................................................................................................................23127.0027.0017.00-----1.003.00--------------1.00-------------------------------------1.00---------3.00-----------1.00-------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGA..........................................................................................................................................22121.0021.009.00-----2.00--1.00-1.00--1.00--------------------1.00---------3.00-----------------------2.00---1.00----------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGATGA.......................................................................................................................................25119.0019.001.001.00-------6.00-1.00----3.001.00-----1.00-------------------2.00------------------------------------1.00--------------------------------------------------------1.001.00-----------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGATT........................................................................................................................................24110.0027.00------1.00---------1.00--1.00------1.00---2.00---1.00---------------------------1.001.00--------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGGC.............1919.009.004.00--------------------------------------------2.00-------------------------------------------------------1.00-------1.00---------1.00------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGGCAGCAGG.......2519.009.005.002.00---------------------------------------------------------------------------------------2.00------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGTTG........................................................................................................................................2418.007.003.00-----2.00----------------1.00----1.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGGCAGCAGGCGATC..3017.007.00-------1.00------5.00---------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTG...........................................................................................................................................2117.007.00---------------1.00-------------------------------6.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGAC.............................................................................................................................................1916.006.001.002.00---------------------------------------------------1.00-1.00--------------------------------------------------1.00-------------------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGGCAGCAGGCG.....2716.006.003.001.00---------------------------------------------------------------------------------1.00--1.00---------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGCTG........................................................................................................................................2415.007.002.00------1.00---1.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGACTGATGAAGCACAAATCAGCCAAACTCTGTTGGTTGTTATGGTTTGATATCGAGGTGTTTCACTGTATGCT.......................................................................9015.005.00------------------------------------------------------5.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGA..............................................................................................................................................1914.004.00------------------------------1.00--------2.00-----------------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGGTG........................................................................................................................................2414.007.003.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGAGG........................................................................................................................................2413.0021.00---------------1.00---1.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................TTACACTTCTTACTCTCAG............................................................................................................................................................................193.000.00------------------------------------------------------------------3.00-----------------------------------------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGACTGAT.........................................................................................................................................2412.002.00--------------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGACTG...........................................................................................................................................2212.002.00----------------------1.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGGCA............2012.002.002.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGGCAGCAGGC......2612.002.002.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GATGAACCTGTCGACTGGGCGGCAGCAGG.......2912.002.00-------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACT............................................................................................................................................2012.002.00------------------------------------------------------------------------------1.00---------------1.00-------------------------------------------------------------------------
...............................................................................................................................................................................................................TCTGCATGATGAACCTGTCGACTGGGCGGCAGC..........3312.002.00---------------------------------------------------------2.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGGCAGC..........2212.002.002.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GCATGATGAACCTGTCGACTGGGCGGCAGCAGG.......3312.002.00---------------------------------------------------1.00-----1.00--------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACCTGTCGACTGGGCGGCAGCAGGCGA....2712.002.00-------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGAA.........................................................................................................................................2311.0021.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGACTGATT........................................................................................................................................2511.002.00---------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CCTGTCGACTGGGCGGCAGC..........2011.001.00---------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
...........................................................................................................................................................................................................................ACCTGTCGACTGGGCGGCAGCAGGCGATC..2911.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACCTGTCGACTGGGCGGCAGCA.........2211.001.00------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGACTGA..........................................................................................................................................2311.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACCTGTCGACTGGGCGGCAGCAGGC......2511.001.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGACTGATGAA......................................................................................................................................2711.001.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................GAGGAAGTGTGTTTTTTTT..........................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----
......................................................................................................................................................................................................................GATGAACCTGTCGACTGGGCGGCAGCAG........2811.001.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGATGG.......................................................................................................................................2511.002038.00----------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGAATCACTCTGCATGATGAACC............................2411.001.00----------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTCATG........................................................................................................................................2411.002.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CTGTCGACTGGGCGGCAGCAGGCG.....2411.001.00-------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
.............................................................................................................................................................................................................................CTGTCGACTGGGCGGC.............1611.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGAAG........................................................................................................................................2411.0021.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGG..............1811.001.00--------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
............................AGAGGAAGTGTGTTTTGTTA..........................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------
..........................................................................................................................................................................................................ATCACTCTGCATGATGAACCTGTCGAC.....................2711.001.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
.............................................................................................................................................................................................................ACTCTGCATGATGAACCTGTCGACTGGGCGGC.............3211.001.00--------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
....................................................................................................AGTAGTGACTGATGAAG.....................................................................................................................................1711.001.00-------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGATA........................................................................................................................................2411.0027.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACCTGTCGACTGGGCGGCAGCAGGCG.....2611.001.00-----------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
...........................................................TTACACTTCTTACTCCTAG............................................................................................................................................................................191.000.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................TTGAAAATGATGAGTAGTGACTGATGA.......................................................................................................................................2711.001.00----------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGACG........................................................................................................................................2411.0021.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CTGTCGACTGGGCGGCAGCAGGCGA....2511.001.00-----------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------
..................................................................................................................................................................................................................GCATGATGAACCTGTCGACTGGGCGGC.............2711.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------
...........................................................................................................................................................................................................TCACTCTGCATGATGAACCTGTCG.......................2411.001.00-------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGACTTATG........................................................................................................................................251.000.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GAACCTGTCGACTGGGCG...............1811.001.00-----------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GAACCTGTCGACTGGGCGGC.............2011.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AATCACTCTGCATGATGAACCTGTCGACTGGGC................3311.001.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...........................................................TTACACTTCTTACTCTTAT............................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
...............................................................................................................................................GTTATGGTTTGATATCGAGGTGTTTC.................................................................................2611.001.00--------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................................................................................GAACCTGTCGACTGGGCGGCAGCAGGCGAT...3011.001.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGATGAACCTGTCGACTGGG.................2011.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CCTGTCGACTGGGCGGCAGCAGGC......2411.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCTGTCGACTGGGCGGCAGCCGG.......2511.002.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGATGAACCTGTCGACTGGGCGGCAGCATGCG.....321.000.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGATC........................................................................................................................................2411.0027.00-----------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................ACTGTATGCTTTGGTTCTTACTCATTTCC....................................................2911.001.00------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
........................................................................................................................................................................................................................TGAACCTGTCGACTGGGCGGCAGC..........2411.001.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GCACAAATCAGCCAAACTCTGTTGGTT...........................................................................................................2711.001.00---------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTGACTGT..........................................................................................................................................2211.007.00------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGAC.............................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
.........................................................................................TGAAAATGATGAGTAGTGACTGAGGA.......................................................................................................................................2611.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGAATCACTCTGCATGATGAAC.............................2311.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
....................................................................................................................................................................................................................ATGATGAACCTGTCGAC.....................1711.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................GAAAATGATGAGTAGTG...............................................................................................................................................1720.500.50-------------------------------------------------------0.50----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CTTTGGTTCTTACTCATTT......................................................1920.500.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------0.50--
........................................................................................................GTGACTGATGAAGCA...................................................................................................................................1550.200.20----------------------------------------------------------------------------------------------------------------------------------------------------------------------0.20-

Antisense strand
AGGGTGGTATTCTAGAAGAGTCAGTTCTAGAGGAAGTGTGTTTTCCTCAACGCTCACAGTTACACTTCTTACTCTCAATCCATTCATATTGAAAATGATGAGTAGTGACTGATGAAGCACAAATCAGCCAAACTCTGTTGGTTGTTATGGTTTGATATCGAGGTGTTTCACTGTATGCTTTGGTTCTTACTCATTTCCAGGAATCACTCTGCATGATGAACCTGTCGACTGGGCGGCAGCAGGCGATCAT
...................................................((((((((((((((((.(((...(((((........)))))...))).)))).))))))).))).))....................................................................................................................................
..................................................51.................................................................118..................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037938(GSM510476)
293Red. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037935(GSM510473)
293cand3. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR038857(GSM458540)
D20. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR038853(GSM458536)
MELB. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191470(GSM715580)
118genomic small RNA (size selected RNA from . (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359174(GSM359174)
hela_5_1. (hela)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
................................................................ATGGATTGAGAGTAAGAAG....................................................................................................................................................................... 1911.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
......................AGTTCTAGAGGAAGTCTG.................................................................................................................................................................................................................. 181.000.00-------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------
........................CACACTTCCTCTAGAA.................................................................................................................................................................................................................. 1670.140.14-----------------------------------------------------------------------------------------------------------------------------------------------------------------------0.14
..................................................................................................................................................................................................................................TGCTGCCGCCCAGTC......... 1570.140.14------------------------------------------------------------------------------------------------------------0.14-----------------------------------------------------------