ID: uc003pwi.1_intron_6_0_chr6_116325162_r.5p
GENE: FRK(1)
chr6:116380931-116381180-


(2)
AGO2.ip 		(5)
B-CELL 		(3)
BRAIN 		(13)
BREAST 		(7)
CELL-LINE 		(14)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(1)
KIDNEY 		(7)
LIVER 		(2)
OTHER 		(11)
SKIN 		(1)
UTERUS

Sense strand
TATATTCCTTCTAACTACGTGGCTGAGGACAGAAGCCTACAGGCAGAGCCGTGAGTAGTACAAACTTATACTTAATTTCTGAACTCTCTGAGGGCTGGGTAATGAGTTTTCCTTTCTACTTCTCTACAACCCCCTAATGTCCAAAGAGTTGCCTAAAAAGTATGAGGAAGTACTGGCAAGAAACCACTAATTGAAACACACCTCCCCCGCTAAGTGAGTGTGAAACTGGCCAGTAATTGTTGTTGAGATG
.............................................................(((((((((((((.((((.((....)).))))..)))))).))))))).............................................................................................................................................
.............................................................62.................................................................................145.......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040039(GSM532924)
G531T. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR040011(GSM532896)
G529T. (cervix)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		TAX577739(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM532880(GSM532880)
G659T. (cervix)		SRR040036(GSM532921)
G243N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040027(GSM532912)
G220T. (cervix)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532877(GSM532877)
G691N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR040038(GSM532923)
G531N. (cervix)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		GSM532879(GSM532879)
G659N. (cervix)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................TATACTTAATTTCTGCCA......................................................................................................................................................................1838.000.005.001.00-3.00--3.00--2.002.00--2.00-2.00-----2.00---1.00-1.001.00------1.00-1.001.001.00--1.00-----1.00--1.001.001.001.00--1.00-1.001.00--------
.....................................................................................CTCTGAGGGCTGGGTCT....................................................................................................................................................173.000.00----3.00----------------------------------------------------------------
.....................................................................................CTCTGAGGGCTGGGTCGGT..................................................................................................................................................193.000.00-----------------------1.00--------------------1.00--1.00---------------------
......................................................................CTTAATTTCTGAACTCTGAAC...............................................................................................................................................................212.000.00------------2.00--------------------------------------------------------
......................................................................CTTAATTTCTGAACTCTG..................................................................................................................................................................182.000.00-------1.00-----------------------------------------1.00-------------------
..........CTAACTACGTGGCTGAGGACAGAA........................................................................................................................................................................................................................2412.002.00--------------2.00------------------------------------------------------
....................................................................TACTTAATTTCTGAACTCTG..................................................................................................................................................................202.000.00-----------------1.00-----------1.00---------------------------------------
.................................................................TTATACTTAATTTCTGCCA......................................................................................................................................................................191.000.00---------------------------------------------1.00-----------------------
.........TCTAACTACGTGGCTGAGG..............................................................................................................................................................................................................................1911.001.00----------------------1.00----------------------------------------------
......................CTGAGGACAGAAGCCACG..................................................................................................................................................................................................................181.000.00--------1.00------------------------------------------------------------
.....TCCTTCTAACTACGTGG....................................................................................................................................................................................................................................1711.001.00-----------------------------------------------------------------1.00---
.................................................................................AACTCTCTGAGGGCTGGGTAAT...................................................................................................................................................2211.001.00--------------------1.00------------------------------------------------
......................................................................CTTAATTTCTGAACTCCG..................................................................................................................................................................181.000.00-------1.00-------------------------------------------------------------
...............TACGTGGCTGAGGACAGAAGCCTACAGGCAGAGCC........................................................................................................................................................................................................3511.001.00------------------1.00--------------------------------------------------
............AACTACGTGGCTGAGGACAGA.........................................................................................................................................................................................................................2111.001.00-------------------1.00-------------------------------------------------
.....................................................................ACTTAATTTCTGAACTCTG..................................................................................................................................................................191.000.00-----------------1.00---------------------------------------------------
.........TCTAACTACGTGGCTGAGGA.............................................................................................................................................................................................................................2011.001.00------------------------------------1.00--------------------------------
.........TCTAACTACGTGGCTGAG...............................................................................................................................................................................................................................1811.001.00--------------------------1.00------------------------------------------
...........................................................................................................................CTACAACCCCCTAATCTA.............................................................................................................181.000.00--1.00------------------------------------------------------------------
................................................................................................................................................................TATGAGGAAGTACTGGGT........................................................................181.000.00---------------------------------1.00-----------------------------------
................................................................................GAACTCTCTGAGGGCTGGGTAA....................................................................................................................................................2211.001.00----------------------------------------------------------------1.00----
...................................................................ATACTTAATTTCTGAACA.....................................................................................................................................................................181.000.00--------------------------------1.00------------------------------------
.....................GCTGAGGACAGAAGCCTACA.................................................................................................................................................................................................................2011.001.00-------------------1.00-------------------------------------------------
..................................................................TATACTTAATTTCTGGCA......................................................................................................................................................................181.000.00-------------------------------------------1.00-------------------------
...................................................................ATACTTAATTTCTGAACCA....................................................................................................................................................................191.000.00--------------------1.00------------------------------------------------
.....................GCTGAGGACAGAAGCCTACAGGCAG............................................................................................................................................................................................................2511.001.00--------1.00------------------------------------------------------------
...................................................................ATACTTAATTTCTGAACCCA...................................................................................................................................................................201.000.00--------------------------------------------------------------1.00------
............AACTACGTGGCTGAGGACA...........................................................................................................................................................................................................................1911.001.00-1.00-------------------------------------------------------------------
...................................................................ATACTTAATTTCTGAACTCTG..................................................................................................................................................................211.000.00-1.00-------------------------------------------------------------------
......................................................................................................TGAGTTTTCCTTTCTAAT..................................................................................................................................181.000.00--1.00------------------------------------------------------------------
.....................................................................................................................ACTTCTCTACAACCCCCATTT................................................................................................................211.000.00------------------------1.00--------------------------------------------
......................................................................................TCTGAGGGCTGGGTATAGA.................................................................................................................................................191.000.00-----------------------------------------1.00---------------------------
.................CGTGGCTGAGGACAGA.........................................................................................................................................................................................................................1620.500.50-------------------------------------------------------------------0.50-
..................GTGGCTGAGGACAGAAGC......................................................................................................................................................................................................................1820.500.50------------------------------------------------------------------0.50--
....................................................................TACTTAATTTCTGAAC......................................................................................................................................................................1630.330.33----------------------0.33----------------------------------------------
...................................................................ATACTTAATTTCTGAA.......................................................................................................................................................................1680.120.12-------0.12-------------------------------------------------------------

Antisense strand
TATATTCCTTCTAACTACGTGGCTGAGGACAGAAGCCTACAGGCAGAGCCGTGAGTAGTACAAACTTATACTTAATTTCTGAACTCTCTGAGGGCTGGGTAATGAGTTTTCCTTTCTACTTCTCTACAACCCCCTAATGTCCAAAGAGTTGCCTAAAAAGTATGAGGAAGTACTGGCAAGAAACCACTAATTGAAACACACCTCCCCCGCTAAGTGAGTGTGAAACTGGCCAGTAATTGTTGTTGAGATG
.............................................................(((((((((((((.((((.((....)).))))..)))))).))))))).............................................................................................................................................
.............................................................62.................................................................................145.......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040039(GSM532924)
G531T. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR040011(GSM532896)
G529T. (cervix)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		TAX577739(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM532880(GSM532880)
G659T. (cervix)		SRR040036(GSM532921)
G243N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040027(GSM532912)
G220T. (cervix)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532877(GSM532877)
G691N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR040038(GSM532923)
G531N. (cervix)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		GSM532879(GSM532879)
G659N. (cervix)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................................................................AAGTAGAAAGGAAAACTCAT................................................................................................................................. 2013.003.00-----2.00--------------------------------------------------1.00------------
.......................................................................................AAACTCATTACCCAGCCCTCAG............................................................................................................................................. 2211.001.00----------------1.00----------------------------------------------------
.................................................................................................................GGGGTTGTAGAGAAGTAGAA..................................................................................................................... 2011.001.00------------------1.00--------------------------------------------------
....................................................................................................................................CCTAATGTCCAAAGAGAAA................................................................................................... 191.000.00------------------------------1.00--------------------------------------
........................................................................................................GTTGTAGAGAAGTAGAAAGGAAAACT........................................................................................................................ 2611.001.00-------------------------------------------------------1.00-------------
............................................................................................................................................................AAAGTATGAGGAAGTAGCG........................................................................... 191.000.00--1.00------------------------------------------------------------------
.....................................................................................................GTAGAGAAGTAGAAAGGAAAACTCAT........................................................................................................................... 2611.001.00-----------1.00---------------------------------------------------------
..............................................AGTTTGTACTACTCACGGCT........................................................................................................................................................................................ 2011.001.00-------------------------------------------------------------1.00-------
.................................................................TTATACTTAATTTCTCAA....................................................................................................................................................................... 181.000.00----------------------------------------------1.00----------------------
............................CTCACGGCTCTGCCTGTAGGCTTCTGT................................................................................................................................................................................................... 2711.001.00----------------------------------------1.00----------------------------
....................................................................................................................................GCAACTCTTTGGACATTAGG.................................................................................................. 2011.001.00--------------------------------------------------1.00------------------
.......................................................................................................GTTGTAGAGAAGTAGAAAGGAAAACTC........................................................................................................................ 2711.001.00---------------------------------------------------------------1.00-----
.................................................................................................................................ACTCTTTGGACATTAGGGGG..................................................................................................... 2011.001.00-------------------------------1.00-------------------------------------
...................................................................................................AGAAAGGAAAACTCATTA..................................................................................................................................... 1811.001.00----------------------------------1.00----------------------------------
................................................................................................................GGGGTTGTAGAGAAGTAGAAA..................................................................................................................... 2111.001.00-----1.00---------------------------------------------------------------
........................................................................................................GAGAAGTAGAAAGGAAAACT.............................................................................................................................. 2011.001.00-----------1.00---------------------------------------------------------
.......................................................................................................................................AGGCAACTCTTTGGACATT................................................................................................ 1911.001.00----------------------------------------------------------1.00----------
............................................TATAAGTTTGTACTACTCACGGCTCT.................................................................................................................................................................................... 2611.001.00----------------1.00----------------------------------------------------
................................................................................CAGCCCTCAGAGAGTTC......................................................................................................................................................... 1730.330.33--------------------------------------------------------------------0.33