ID: uc003pui.1_intron_12_0_chr6_111095141_r.5p
GENE: CDK19(1)
chr6:111136574-111136823-


(10)
B-CELL 		(10)
BREAST 		(32)
CELL-LINE 		(8)
CERVIX 		(2)
FIBROBLAST 		(5)
HEART 		(2)
HELA 		(1)
KIDNEY 		(7)
LIVER 		(2)
OTHER 		(14)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGGTACGCAGGCGCGCATGCTTTGTGGGGGCGAGGCTGTGGTGGCCCGAGGTAACCTGGGAGCTGTATTTCTTACGCCGGCAAAACCGCCCAGGCCGCTGAGGCCTTCGCGACTTCATTTCCCAGGAGCCTCCGCGACCATGGGGCGGGCCAGTGAGTTCGCTAATGAGCTCGAGGAAGCCACGGCGCGGCCCACCAGGTTCCAAAACAAGGAAATGAAGGAGGGAGGCGGGACTGGGGGTGCCTGCGGG
...............................................(((((..(((((((((((............)))).....(((..(((((.....)))))..)))........))))))).))))).(((.((....(((...((..((((((((....)))))))).))..)))..)))))..............................................................
............................................45..............................................................................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM339994(GSM339994)
hues6. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040037(GSM532922)
G243T. (cervix)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PAZD5SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM532884(GSM532884)
G871T. (cervix)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		TAX577742(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM532886(GSM532886)
G850T. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		GSM532883(GSM532883)
G871N. (cervix)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
.....................................................................................................................................................................TGAGCTCGAGGAAGCCACGG.................................................................2018.008.00-8.00----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................AGGCGGGACTGGGGGTGCCTG....2115.005.002.00----------------------------------------------1.00---1.00-------------1.00------------------------------
....................................................................................................................................................................ATGAGCTCGAGGAAGCCACGG.................................................................2115.005.00--2.00--1.00-------1.00-------------1.00--------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGAAA.................................................................................................................................................................................................................185.000.002.00------1.00--------1.00-----------------------------------------------1.00-------------------------------
...................................................................................................................................................................AATGAGCTCGAGGAAGCCACGGCG...............................................................2414.004.00--2.00--------1.00--------------------------------------------------1.00---------------------------------
.......................GTGGGGGCGAGGCTGTA..................................................................................................................................................................................................................1734.001.672.00---------------0.33-----0.330.67-----------------------------------------------0.33---------------0.33--------
....................................................................................................................................................................................................................................CGGGACTGGGGGTGCCTG....1814.004.00-2.00----------------------------------------------1.001.00----------------------------------------------
.......................GTGGGGGCGAGGCTGAAAA................................................................................................................................................................................................................193.000.001.00-----------1.00-1.00---------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGGAA................................................................................................................................................................................................................193.000.00--2.00---------1.00-----------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTCG.................................................................................................................................................................................................................1832.331.670.67--0.67------------------------0.33-------------------------------------------0.33----------------0.33------
.......................GTGGGGGCGAGGCTGTG..................................................................................................................................................................................................................1722.002.000.500.50---------------------------------------------------------------------0.50-0.50----------------------
.......................GTGGGGGCGAGGCTGGAAA................................................................................................................................................................................................................192.000.00--------1.00--------------1.00------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGAG..................................................................................................................................................................................................................172.000.001.00-------1.00---------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGAA..................................................................................................................................................................................................................172.000.001.00-----------------------------------------------------------1.00-----------------------------------
................................................................................................................................................................GCTAATGAGCTCGAGGAAG.......................................................................1912.002.00------1.00------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................................................................GGCGGGACTGGGGGTGTTT.....192.000.00----2.00-------------------------------------------------------------------------------------------
...............................................GAGGTAACCTGGGAGCTG.........................................................................................................................................................................................1812.002.00--1.00--1.00------------------------------------------------------------------------------------------
........................................GTGGCCCGAGGTAACCTGGGAGCTGTACC.....................................................................................................................................................................................292.000.00----------2.00-------------------------------------------------------------------------------------
.................................................GGTAACCTGGGAGCTGTAT......................................................................................................................................................................................1912.002.00---2.00--------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGTAA................................................................................................................................................................................................................192.000.00------1.00-------1.00---------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTAA.................................................................................................................................................................................................................1831.671.671.00---------------------0.67-------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGT...................................................................................................................................................................................................................1631.671.67----------------------0.67-----------------------------------------------------------0.33--0.330.33---------
.......................GTGGGGGCGAGGCTGTAAA................................................................................................................................................................................................................1931.331.670.67------0.33---------------------0.33------------------------------------------------------------------
................................................................................................................................................................GCTAATGAGCTCGAGGAAGCC.....................................................................2111.001.00------------------------------------------1.00-----------------------------------------------------
....................................................AACCTGGGAGCTGTATTTCT..................................................................................................................................................................................2011.001.00------------------1.00-----------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGAAC.................................................................................................................................................................................................................181.000.00---------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................CGGGACTGGGGGTGCCTGCGTAG231.000.00--------------------------------1.00---------------------------------------------------------------
...............................................................................................................................................................................................................CAAGGAAATGAAGGAGGGAGG......................2111.001.00------------------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................TAATGAGCTCGAGGAAGCCACGGC................................................................2411.001.00--------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................GGGGCGGGCCAGTGAGTTCGCT.......................................................................................2211.001.00------------------------------------1.00-----------------------------------------------------------
.......................GTGGGGGCGAGGCTGTT..................................................................................................................................................................................................................1731.001.67--------0.67-----------------------------------------------------------------------0.33---------------
...................................................................................................................................................................AATGAGCTCGAGGAAGCCACGGTG...............................................................2411.001.00--1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................GCTCGAGGAAGCCACGGCGCGGCCCACCAGGT..................................................3211.001.00----------------------------------------------------1.00-------------------------------------------
.......................GTGGGGGCGAGGCTGGCAA................................................................................................................................................................................................................191.000.00-------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................TCGCTAATGAGCTCGAGGAAGCC.....................................................................2311.001.00----------------1.00-------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGT..................................................................................................................................................................................................................171.000.00--------------------------------------------------1.00---------------------------------------------
.............................................................................................................................................................................................................................AGGGAGGCGGGACTGCACT..........191.000.00--------------------------------------------------------------------1.00---------------------------
....................................................................................................................................................................................................................................CGGGACTGGGGGTGCCTGCGGGGGC251.000.00----1.00-------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGAGC.................................................................................................................................................................................................................181.000.00---------1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................GGAAGCCACGGCGCGGCCCA........................................................2011.001.00-----------------------------------1.00------------------------------------------------------------
....................................................AACCTGGGAGCTGTATTTCTTACG..............................................................................................................................................................................2411.001.00-----1.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................CTCGAGGAAGCCACGGCGCGGC...........................................................2211.001.00-------1.00----------------------------------------------------------------------------------------
..............................................................................GGCAAAACCGCCCAGACCG.........................................................................................................................................................191.000.00---------------------------------------1.00--------------------------------------------------------
....................................................................................................................................................................ATGAGCTCGAGGAAGCCACGGCGC..............................................................2411.001.00-------------1.00----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GGGAGGCGGGACTGGGGGTG........2021.001.00------------------------0.50---------------------------------------------------0.50-------------------
.......................GTGGGGGCGAGGCTGGTGC................................................................................................................................................................................................................191.000.00-----------------1.00------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGCG.................................................................................................................................................................................................................181.000.00-----------------------------------------------------1.00------------------------------------------
.......................GTGGGGGCGAGGCTGCTGG................................................................................................................................................................................................................191.000.00--------------------------------------------1.00---------------------------------------------------
........................................................TGGGAGCTGTATTTCTTACGCCGG..........................................................................................................................................................................2411.001.00-------------------------1.00----------------------------------------------------------------------
................ATGCTTTGTGGGGGCGAGGCTGGGG.................................................................................................................................................................................................................251.000.00-----------------------------------------------------------1.00------------------------------------
................................................................................................................................................................GCTAATGAGCTCGAGG..........................................................................1611.001.00-------------1.00----------------------------------------------------------------------------------
....................................................................................ACCGCCCAGGCCGCTGAGG...................................................................................................................................................1911.001.00-------------------------------------1.00----------------------------------------------------------
...............................................................................GCAAAACCGCCCAGGCCG.........................................................................................................................................................1811.001.00----------------------------------1.00-------------------------------------------------------------
...................................................................................................................................................................AATGAGCTCGAGGAAGCCACGG.................................................................2211.001.00----------------------------------------------1.00-------------------------------------------------
.................................................................................................................TTCATTTCCCAGGAGGATT......................................................................................................................191.000.00---------------------------------------------------------------------1.00--------------------------
......................................................................................................................................................CAGTGAGTTCGCTAATGAGCTCGAGGAAGCCA....................................................................3211.001.00-------------------------------------------------------------------1.00----------------------------
........................................GTGGCCCGAGGTAACCTGGGAGCTGTAGA.....................................................................................................................................................................................291.000.00----------1.00-------------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGGAAATGAAGGAGGGAG.......................1911.001.00-------------------------------------------------------------1.00----------------------------------
.......................GTGGGGGCGAGGCTGGAGA................................................................................................................................................................................................................191.000.00--1.00---------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTGGCT...............................................................................................................................................................................................................2021.001.00------0.50----------0.50------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGTCT................................................................................................................................................................................................................191.000.00---------------------------------------------1.00--------------------------------------------------
..................................................................................................................................................................................................................................GGCGGGACTGGGGGTGCCTGC...2111.001.00-----------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................AGGCGGGACTGGGGGTGC.......1821.001.00---------------------------------------------------------------------------0.50-0.50------------------
......................................................................................................................................................................GAGCTCGAGGAAGCCACGG.................................................................1911.001.00-------------------------------------------------------1.00----------------------------------------
........................................................TGGGAGCTGTATTTCTTACGCCGGC.........................................................................................................................................................................2511.001.00--------------------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................................................................AGGAGGGAGGCGGGACTGG.............1911.001.00--------------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................................CTCGAGGAAGCCACGGCG...............................................................1811.001.00----1.00-------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGAG.................................................................................................................................................................................................................181.000.00------------------------------------------------------------------1.00-----------------------------
.......................GTGGGGGCGAGGCTGAATA................................................................................................................................................................................................................191.000.00---------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................AATGAGCTCGAGGAAGCCA....................................................................1911.001.00---------------------------------1.00--------------------------------------------------------------
........................................................................................................................................................................................................................GAAGGAGGGAGGCGGTAC................181.000.00-------------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................CAAGGAAATGAAGGACGCG........................191.000.00---------------------------------------------------------1.00--------------------------------------
....................................................................................................................................................................................................................................CGGGACTGGGGGTGCCTGA...1911.004.00----------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................CCATGGGGCGGGCCAGTGAGTTCGCT.......................................................................................2611.001.00----------------------------------------------------------1.00-------------------------------------
................................................................................................................................................................GCTAATGAGCTCGAGGAAGCCACGGC................................................................2611.001.00-----------1.00------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTAG.................................................................................................................................................................................................................1831.001.671.00-----------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTGG.................................................................................................................................................................................................................1821.001.00---------------0.50---------0.50----------------------------------------------------------------------
.............................................................................................................................................................TTCGCTAATGAGCTCGAGGAAGCCAC...................................................................2611.001.00---1.00--------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGATA................................................................................................................................................................................................................191.000.00------------------------1.00-----------------------------------------------------------------------
....................................................................................................................................................................ATGAGCTCGAGGAAGCCACGGC................................................................2211.001.00-------------------------------1.00----------------------------------------------------------------
........................................................................................................................................................................GCTCGAGGAAGCCACGG.................................................................1711.001.00---1.00--------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGCAAG................................................................................................................................................................................................................191.000.00-----------------------------1.00------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGTA.................................................................................................................................................................................................................181.000.00------------1.00-----------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGGGGG................................................................................................................................................................................................................191.000.00--------------------------1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................................AGGCGGGACTGGGGGATG.......181.000.00--------------------------------------1.00---------------------------------------------------------
.............................................................................CGGCAAAACCGCCCAGGCCG.........................................................................................................................................................2011.001.00----------------------------1.00-------------------------------------------------------------------
......................................................................................................................................................................GAGCTCGAGGAAGCCACGGC................................................................2011.001.00-----------------------------------------1.00------------------------------------------------------
.......................GTGGGGGCGAGGCTGTAAAA...............................................................................................................................................................................................................2030.671.670.67-----------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTAT.................................................................................................................................................................................................................1830.671.670.67-----------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTCGCT...............................................................................................................................................................................................................2030.671.67-----------------0.67------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTATT................................................................................................................................................................................................................1930.671.670.33------------------------------------------------------------------------------0.33----------------
.......................GTGGGGGCGAGGCTGTGAA................................................................................................................................................................................................................1920.502.00--------------0.50---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................AGGCGGGACTGGGGGTG........1720.500.50------------------------------------------------------------------------------0.50-----------------
.......................GTGGGGGCGAGGCTGTGTCAA..............................................................................................................................................................................................................2120.502.00---------------0.50--------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTGA.................................................................................................................................................................................................................1820.502.00---------------0.50--------------------------------------------------------------------------------
................................................................................................................................................................................................................................GAGGCGGGACTGGGGGTGCCT.....2120.500.50--------------------------------------------------------------------------0.50---------------------
.......................GTGGGGGCGAGGCTGTGCAA...............................................................................................................................................................................................................2020.502.00---------------0.50--------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGGGAGGCGGGACTGGGGG..........1920.500.50-----0.50------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GAGGCGGGACTGGGGGTG........1820.500.50---------------0.50--------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTAATA...............................................................................................................................................................................................................2030.331.670.33-----------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTTAT................................................................................................................................................................................................................1930.331.67--------0.33---------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTCGA................................................................................................................................................................................................................1930.331.67------------------------------------------------------------------------------------------0.33-----
.......................GTGGGGGCGAGGCTGTAGAC...............................................................................................................................................................................................................2030.331.670.33-----------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTCCCT...............................................................................................................................................................................................................2030.331.67------------------------------------------------------------------------------------0.33-----------
................................................................................................................................................................................................................................GAGGCGGGACTGGGGG..........1630.330.33---------------------------------------------------------------------------------0.33--------------
.......................GTGGGGGCGAGGCTGTCAG................................................................................................................................................................................................................1930.331.670.33-----------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTTTT................................................................................................................................................................................................................1930.331.670.33-----------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTAGG................................................................................................................................................................................................................1930.331.67--------------------------------------------------------------------------------------------0.33---
.......................GTGGGGGCGAGGCTGTCA.................................................................................................................................................................................................................1830.331.67--------------------------0.33---------------------------------------------------------------------
...............................................................................................................................................................................................................CAAGGAAATGAAGGAGG..........................1730.330.33---------------------------0.33--------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTATAA...............................................................................................................................................................................................................2030.331.67-------------------------------------------------------------------------------------------0.33----
.......................GTGGGGGCGAGGCTGTAAGC...............................................................................................................................................................................................................2030.331.670.33-----------------------------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTCATT...............................................................................................................................................................................................................2030.331.67----------------------0.33-------------------------------------------------------------------------
.......................GTGGGGGCGAGGCTGTCGC................................................................................................................................................................................................................1930.331.67----------------------------------------------------------------------------------------0.33-------
.......................GTGGGGGCGAGGCTGTCAA................................................................................................................................................................................................................1930.331.67---------------------------------------------------------------------------------------------0.33--
................................................................................................................................................................................................................................GAGGCGGGACTGGGGGGG........1830.330.33-----------------------------------------------------------------------------------0.33------------
.......................GTGGGGGCGAGGCTGTTA.................................................................................................................................................................................................................1830.331.67------------------------------------------------------------------------0.33-----------------------
.....................................................................................................................................................................................................................................GGGACTGGGGGTGCCTG....1740.250.25----------------------------------------------------------------------------------------------0.25-
...........................................................................................................................................................................................................AAAACAAGGAAATGAAG..............................1760.170.17-----------------------------------------------------------------------------------------------0.17
................................................................................................................................................................................................................AAGGAAATGAAGGAGGG.........................1770.140.14------------------------------0.14-----------------------------------------------------------------

Antisense strand
TGGTACGCAGGCGCGCATGCTTTGTGGGGGCGAGGCTGTGGTGGCCCGAGGTAACCTGGGAGCTGTATTTCTTACGCCGGCAAAACCGCCCAGGCCGCTGAGGCCTTCGCGACTTCATTTCCCAGGAGCCTCCGCGACCATGGGGCGGGCCAGTGAGTTCGCTAATGAGCTCGAGGAAGCCACGGCGCGGCCCACCAGGTTCCAAAACAAGGAAATGAAGGAGGGAGGCGGGACTGGGGGTGCCTGCGGG
...............................................(((((..(((((((((((............)))).....(((..(((((.....)))))..)))........))))))).))))).(((.((....(((...((..((((((((....)))))))).))..)))..)))))..............................................................
............................................45..............................................................................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM339994(GSM339994)
hues6. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM359202(GSM359202)
hepg2_untreated_a. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040037(GSM532922)
G243T. (cervix)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PAZD5SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM532884(GSM532884)
G871T. (cervix)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		TAX577742(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM532886(GSM532886)
G850T. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM359190(GSM359190)
HepG2_3pM_4. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		GSM532883(GSM532883)
G871N. (cervix)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
.................................................................TTGCCGGCGTAAGAAATA....................................................................................................................................................................... 1812.002.00---------------------2.00--------------------------------------------------------------------------
................................................................................CAAAACCGCCCAGGCAATG....................................................................................................................................................... 191.000.00------------------------------------------------------1.00-----------------------------------------
..........................................................................................................................................................................................................................................TGGGGGTGCCTGCGGCT 171.000.00---------------------------------------------------------------1.00--------------------------------
........................................................................................................................................................................................................................................CCGCAGGCACCCCCAGT. 1711.001.00-------------------------------------------1.00----------------------------------------------------
....................................................................................CTCAGCGGCCTGGGCGGT.................................................................................................................................................... 1811.001.00------------------1.00-----------------------------------------------------------------------------
....ACGCAGGCGCGCATGTAG.................................................................................................................................................................................................................................... 181.000.00------1.00-----------------------------------------------------------------------------------------
................................................................................CAAAACCGCCCAGGCCGCTGAGGCCTTCGGC........................................................................................................................................... 311.000.00----------------------------------------------------------------------1.00-------------------------