ID: uc003pqj.3_intron_4_0_chr6_100896129_r
GENE: (6)
chr6:100896079-100896404-


(7)
B-CELL
(2)
BRAIN
(5)
BREAST
(12)
CELL-LINE
(1)
CERVIX
(4)
FIBROBLAST
(3)
HEART
(1)
LIVER
(6)
OTHER
(35)
SKIN
(1)
TESTES

Sense strand
TTTATGTTCCGCGCCAGCCTGGACATGAAGCTCATCTTTCTGGACTCCAGGTGGGTGGGCAGGGCCGGAAAGGGCCTCTCCTAGCCTGAGGGCGGCCCTGCTTAGTGACTGAGAGATTTCCGTCTATCCTATGAGCCCATTTTGCACATGAGGCGACTGAATCGGCCCTGGAAAGTGAGGGCGGACAGCTAGGTGTCAGACGGCTGTCGAGGGTGTGTGGGGAGGGCATCCCTGCACCCGCGCCTGCATTCATCCTGCAGGGATTGCTCTCCTCAGGGTGGCGGAGCTGACGGGGTACGAACCTCAGGACCTGATTGAGAAGACTC
.........................................................................................................................................................................................................................(((((((((((((((((((...((....))........))))))))).))))))))))...................................................
....................................................................................................................................................................................................................213............................................................276................................................
SizePerfect hitTotal NormPerfect NormSRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR189784DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189785SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAG..................................................19112.0012.00-5.002.00-3.00-------1.00--------------------------1.00-------------------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAGA.................................................2015.0012.00--1.00-------2.00-1.00----------------------------1.00-----------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCAGT.................................................234.000.00--2.00-------1.00----1.00-------------------------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCAT..................................................2213.003.001.00-2.00--------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCA...................................................2113.003.00-1.002.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................CAGGGTGGCGGAGCTGTTT..................................193.000.00---1.00----------1.00--------------------------------------------------1.00-----------
.........................................................................................................................................................................................................................TGGGGAGGGCATCCCTGCACCC.......................................................................................2213.003.00-------------------1.00----2.00----------------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCAGA.................................................232.000.00--1.00--------------1.00-----------------------------------------------------------
...............................................................................................................................................................................................................................................................TGCAGGGATTGCTCTCCTCAGA.................................................2212.002.00-------------1.00---1.00-----------------------------------------------------------
..................................................................................................................................................................................................................................................................................AGGGTGGCGGAGCTGTCT..................................182.000.00---2.00-------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................TGCAGGGATTGCTCTCCTCAG..................................................2112.002.00-2.00---------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCCCAG..................................................222.000.00--------2.00--------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................AGGGTGGCGGAGCTGTCC..................................182.000.00---1.00-------------------------------------------1.00-----------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAGAAG...............................................2212.0012.00------------------2.00----------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TACGAACCTCAGGACCTGAT...........2011.001.00--1.00--------------------------------------------------------------------------
....................................................GGGTGGGCAGGGCCGGGGT...............................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------1.00------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAA..................................................191.000.00-1.00---------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................TGCAGGGATTGCTCTCCTCAGAA................................................2311.002.00------------------------------1.00----------------------------------------------
....................................................................................................................................................TGAGGCGACTGAATCGAA................................................................................................................................................................181.000.00-----------------------------------1.00-----------------------------------------
................GCCTGGACATGAAGCTCATCTTTCT.............................................................................................................................................................................................................................................................................................2511.001.00--1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAGAAA...............................................2211.0012.00------------------------------------1.00----------------------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAGTCT...............................................2211.0012.00--------------------------------------------------------------1.00--------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCATTTT...............................................221.000.00-1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................AGGGTGGCGGAGCTGTTT..................................181.000.00---1.00-------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................TGCAGGGATTGCTCTCCCCAG..................................................211.000.00----1.00------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................GCGGAGCTGACGGGGGAGG...........................191.000.00-----------------------------1.00-----------------------------------------------
.................................................................................................................................................................................................................................................................................CAGGGTGGCGGAGCTGTCT..................................191.000.00---1.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................AGGGTGGCGGAGCTGGAT..................................181.000.00---1.00-------------------------------------------------------------------------
.......................................................................................................AGTGACTGAGAGATTTCCGA...........................................................................................................................................................................................................201.000.00--------------------------------1.00--------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCAGTA................................................241.000.00----------------------------------------------------------1.00------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAATTT...............................................221.000.00-1.00---------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCAGC.................................................231.000.00---------------------------------------------------------------------------1.00-
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCT.....................................................1911.001.00--1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................TGCAGGGATTGCTCTCCTCAGT.................................................2211.002.00--------------------------------------------------------1.00--------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCCATT..................................................221.000.00--------------------------------------1.00--------------------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCCCAG..................................................191.000.00--------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAGAG................................................2111.0012.00-----1.00-----------------------------------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCT...................................................2111.001.00-1.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCCCAA..................................................191.000.00----1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTC....................................................2011.001.00-------------------------------------1.00---------------------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCATTCT...............................................221.000.00-1.00---------------------------------------------------------------------------
...................................................................................................................................................ATGAGGCGACTGAATCGGAT...............................................................................................................................................................201.000.00----------------------------------------------------------------------1.00------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCAAA.................................................2311.003.00--1.00--------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCATT.................................................2311.003.00----------------------------------------------------------------------------1.00
...................................................................................................................................................................................................................................ATCCCTGCACCCGCGCCTGCCGC............................................................................231.000.00----------------------------------------------------1.00------------------------
................................................................................................................................................................................................................................................................GCAGGGATTGCTCTCCTCAGT.................................................211.000.00---------------------------------------------1.00-------------------------------
..............................................................................................................................................................................................................................................................CTGCAGGGATTGCTCTCCTCAGAA................................................241.000.00---------------------------------------------------------------1.00-------------
................................................................................................................................................................................................................................................................................TCAGGGTGGCGGAGCGGTC...................................191.000.00--------------1.00--------------------------------------------------------------
.................................................................................................................................................................................................................................................................CAGGGATTGCTCTCCTCAGTTT...............................................2211.0012.00-1.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................CAGGGTGGCGGAGCTGTCA..................................191.000.00---1.00-------------------------------------------------------------------------

Antisense strand
TTTATGTTCCGCGCCAGCCTGGACATGAAGCTCATCTTTCTGGACTCCAGGTGGGTGGGCAGGGCCGGAAAGGGCCTCTCCTAGCCTGAGGGCGGCCCTGCTTAGTGACTGAGAGATTTCCGTCTATCCTATGAGCCCATTTTGCACATGAGGCGACTGAATCGGCCCTGGAAAGTGAGGGCGGACAGCTAGGTGTCAGACGGCTGTCGAGGGTGTGTGGGGAGGGCATCCCTGCACCCGCGCCTGCATTCATCCTGCAGGGATTGCTCTCCTCAGGGTGGCGGAGCTGACGGGGTACGAACCTCAGGACCTGATTGAGAAGACTC
.........................................................................................................................................................................................................................(((((((((((((((((((...((....))........))))))))).))))))))))...................................................
....................................................................................................................................................................................................................213............................................................276................................................
SizePerfect hitTotal NormPerfect NormSRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR189784DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189785SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
................................................................................................................................................................................................................................................................................................GACGGGGTACGAACCCG..................... 1745.000.0013.00----3.00-3.00-2.00-1.00----2.00---2.002.002.001.00-2.00-1.001.00-----1.00-----1.00-1.00-1.00-1.00---1.00------1.00-------------1.001.00-1.00--
................................................................................................................................................................................................................................................................................................GGTTCGTACCCCGTC....................... 15112.0012.00-----1.00---1.00-1.00-1.00------------1.00----1.00-1.00---------1.00-----1.00----1.00----1.00------1.00----------
................................................................................................................................................................................................................................................................................................GACGGGGTACGAACCCGTG................... 198.000.001.00--------------1.00-------1.00------------------------1.00-----------1.00------1.00-1.00---1.00---
.......................CATGAAGCTCATCTTCAAA............................................................................................................................................................................................................................................................................................ 195.000.00------5.00----------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GACGGGGTACGAACCCGT.................... 182.000.001.00----------------------------------------------------1.00-----------------------
.....................................................................................................................................................................................................................GATGCCCTCCCCACACA................................................................................................ 1711.001.00-------------------1.00---------------------------------------------------------
...........................................................................................................................................................................................................................................ACCCGCGCCTGCATTAGGG........................................................................ 191.000.00-------------------------------------------------------------1.00---------------
.............................................................................................................................................................................................................GTCGAGGGTGTGTGGGCGGC..................................................................................................... 201.000.00--------------------------------------------------------------------1.00--------
................................................................................................................................................................................................................................................CGCCTGCATTCATCCTGGTGT................................................................. 211.000.00-1.00---------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GACGGGGTACGAACCC...................... 161.000.00-------------------------------------------------------1.00---------------------
.................................................................................................................................................................................................................................................GCCTGCATTCATCCTC..................................................................... 161.000.00--------------------------1.00--------------------------------------------------
...............................................................................................................................................................................................................CGAGGGTGTGTGGGGCGGG.................................................................................................... 191.000.00---------------------------------------------------1.00-------------------------