uc003plj.1_intron_2_0_chr6_87797926

CTATCTCTTTCCTAAGGAGAACTTTTTTTAAAAAAAATTACATGGTTTTAGTATATGTTGGGAGCTAAAAGCAGGGAGGTCAAGACACTGATGACTATTATTAATAGTAATGTTGAAACTACTGGTTGTTGTTATGACTGGTAAGCCAATTTTAGATTAACTGTTTTTTGTTTTTTTTTTTTTGCCATGTCTGTCTGCAGGAGCGCCATGGATTACTACAGAAAATATGCAGCTATCTTTCTGGTCACAT ..................................................(((......((((((.((((((((...(((((.((((...(((((((.((((((((....))))))...)).))))))))))).)))))((....)).............)))))))).)))))).......)))................................................................. ..................................................51....................................................................................................................................185...............................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela)	SRR390725(GSM850204) small rna immunoprecipitated. (cell line)	DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR207117(GSM721079) Whole cell RNA. (cell line)	SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast)	SRR029128(GSM416757) H520. (cell line)	SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin)	SRR189786	GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain)
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTGG.....................................................................	22		3.00	0.00	1.00	2.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCGTTC.............................................................	25		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................TGTTTTTTGTTTTTTTTTTTTTGGGAG..............................................................	27		3.00	0.00	-	2.00	-	-	-	-	-	-	-	-	1.00	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTCTGG...................................................................	24		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCGT...............................................................	23		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCGTTC.............................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................ACTACTGGTTGTTGTTATGACTGGTAAGCCAATTTTAGATTAACTGTTTTT..................................................................................	51	1	2.00	2.00	-	-	-	-	2.00	-	-	-	-	-	-	-
......................................................................................................................................................................TTTGTTTTTTTTTTTTTGCCTGGC............................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCGT...............................................................	22		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................CTGTTTTTTGTTTTTTTTTGGC....................................................................	22		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................TTTGTTTTTTTTTTTTTGCCTGG.............................................................	23		2.00	0.00	1.00	-	-	-	-	1.00	-	-	-	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTGG....................................................................	23		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTCCAG...................................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................TGTTTTTTGTTTTTTTTTTTTTGGCCC..............................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................ATGGATTACTACAGAAAATATGCAGC.................	26	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................CTGTTTTTTGTTTTTTTTTTTCGTG.................................................................	25		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-
.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCGTT..............................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCCGGCT............................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TTTTTTGTTTTTTTTTTTTTGCCACTGC...........................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTTTTTGTC...............................................................	28		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCGTCC.............................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCCTTG.............................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTGGT....................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................CTGTTTTTTGTTTTTTTTTTTAACC.................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................TTGTTTTTTTTTTTTTGCCTGGC............................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.....................................................TATGTTGGGAGCTAAAAGCA.................................................................................................................................................................................	20	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................CTGTTTTTTGTTTTTTTTGATT....................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................TAGATTAACTGTTTTTCT................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTAACA...................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................TTTGTTTTTTTTTTTTTGCCCGGC............................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCGGCC.............................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................TTGTTTTTTTTTTTTTGCGTTG.............................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCGTC..............................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................CTGTTTTTTGTTTTTTTTTAGT....................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................TTGTTTTTTTTTTTTTGCCAGGGC...........................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................................CTGTCTGCAGGAGCGCTC..........................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTTTTTAAC...............................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTGGGT..................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTTTGCTG................................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTGGT...................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................TTTGTTTTTTTTTTTTTGCCTTGC............................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCCAGAT............................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTCACC..................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................CTGTTTTTTGTTTTTTTTTTTTTGC.................................................................	25	4	0.25	0.25	-	0.25	-	-	-	-	-	-	-	-	-	-

CTATCTCTTTCCTAAGGAGAACTTTTTTTAAAAAAAATTACATGGTTTTAGTATATGTTGGGAGCTAAAAGCAGGGAGGTCAAGACACTGATGACTATTATTAATAGTAATGTTGAAACTACTGGTTGTTGTTATGACTGGTAAGCCAATTTTAGATTAACTGTTTTTTGTTTTTTTTTTTTTGCCATGTCTGTCTGCAGGAGCGCCATGGATTACTACAGAAAATATGCAGCTATCTTTCTGGTCACAT
..................................................(((......((((((.((((((((...(((((.((((...(((((((.((((((((....))))))...)).))))))))))).)))))((....)).............)))))))).)))))).......))).................................................................
..................................................51....................................................................................................................................185...............................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)

DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207117(GSM721079)
Whole cell RNA. (cell line)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR029128(GSM416757)
H520. (cell line)

SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189786

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTGG.....................................................................

3.00

0.00

1.00

2.00

....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCGTTC.............................................................

3.00

0.00

3.00

.................................................................................................................................................................TGTTTTTTGTTTTTTTTTTTTTGGGAG..............................................................

3.00

0.00

2.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTCTGG...................................................................

2.00

0.00

1.00

....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCGT...............................................................

2.00

0.00

2.00

.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCGTTC.............................................................

2.00

0.00

2.00

.....................................................................................................................ACTACTGGTTGTTGTTATGACTGGTAAGCCAATTTTAGATTAACTGTTTTT..................................................................................

2.00

......................................................................................................................................................................TTTGTTTTTTTTTTTTTGCCTGGC............................................................

2.00

0.00

2.00

.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCGT...............................................................

2.00

0.00

1.00

................................................................................................................................................................CTGTTTTTTGTTTTTTTTTGGC....................................................................

2.00

0.00

2.00

......................................................................................................................................................................TTTGTTTTTTTTTTTTTGCCTGG.............................................................

2.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTGG....................................................................

2.00

0.00

2.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTCCAG...................................................................

2.00

0.00

2.00

.................................................................................................................................................................TGTTTTTTGTTTTTTTTTTTTTGGCCC..............................................................

1.00

0.00

1.00

...............................................................................................................................................................................................................ATGGATTACTACAGAAAATATGCAGC.................

1.00

................................................................................................................................................................CTGTTTTTTGTTTTTTTTTTTCGTG.................................................................

1.00

0.00

1.00

.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCGTT..............................................................

1.00

0.00

1.00

....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCCGGCT............................................................

1.00

0.00

1.00

...................................................................................................................................................................TTTTTTGTTTTTTTTTTTTTGCCACTGC...........................................................

1.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTTTTTGTC...............................................................

1.00

0.00

1.00

....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCGTCC.............................................................

1.00

0.00

1.00

.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCCTTG.............................................................

1.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTGGT....................................................................

1.00

0.00

1.00

................................................................................................................................................................CTGTTTTTTGTTTTTTTTTTTAACC.................................................................

1.00

0.00

1.00

.......................................................................................................................................................................TTGTTTTTTTTTTTTTGCCTGGC............................................................

1.00

0.00

1.00

.....................................................TATGTTGGGAGCTAAAAGCA.................................................................................................................................................................................

1.00

................................................................................................................................................................CTGTTTTTTGTTTTTTTTGATT....................................................................

1.00

0.00

1.00

........................................................................................................................................................TAGATTAACTGTTTTTCT................................................................................

1.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTAACA...................................................................

1.00

0.00

1.00

......................................................................................................................................................................TTTGTTTTTTTTTTTTTGCCCGGC............................................................

1.00

0.00

1.00

....................................................................................................................................................................TTTTTGTTTTTTTTTTTTTGCGGCC.............................................................

1.00

0.00

1.00

.......................................................................................................................................................................TTGTTTTTTTTTTTTTGCGTTG.............................................................

1.00

0.00

1.00

.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCGTC..............................................................

1.00

0.00

1.00

................................................................................................................................................................CTGTTTTTTGTTTTTTTTTAGT....................................................................

1.00

0.00

1.00

.......................................................................................................................................................................TTGTTTTTTTTTTTTTGCCAGGGC...........................................................

1.00

0.00

1.00

..............................................................................................................................................................................................CTGTCTGCAGGAGCGCTC..........................................

1.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTTTTTAAC...............................................................

1.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTGGGT..................................................................

1.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTTTGCTG................................................................

1.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTGGT...................................................................

1.00

0.00

1.00

......................................................................................................................................................................TTTGTTTTTTTTTTTTTGCCTTGC............................................................

1.00

0.00

1.00

.....................................................................................................................................................................TTTTGTTTTTTTTTTTTTGCCAGAT............................................................

1.00

0.00

1.00

...............................................................................................................................................................ACTGTTTTTTGTTTTTTTTTTCACC..................................................................

1.00

0.00

1.00

................................................................................................................................................................CTGTTTTTTGTTTTTTTTTTTTTGC.................................................................

0.25