ID: uc003pcy.3_intron_13_0_chr6_56346977_r.3p
GENE: (70)
chr6:56346927-56347176-


(1)
BRAIN
(2)
BREAST
(9)
CELL-LINE
(1)
FIBROBLAST
(6)
HEART
(1)
KIDNEY
(4)
LIVER
(2)
OTHER
(28)
SKIN

Sense strand
TAGGCTTTTTTTTTAATATATTAAGTGTTTTCTTGTAAAATATGTGTATCTCTATCTTCTTAATGGGAGTAATGAAGCAATTAAATTTAAAACTTTTTTTTTTTCATTGAAGGGATGAATCCACTATACAGTTTTGTAAATTGTGCTAACAGGCATATTTGGGAATTTTGTTTGGGGTGTGTGTGTGTGTGAACTCTTAGGCAGAGGAATTCCACTCGGTGGTACATGCCCTCTTGGAGTGGCTGGCTGA
....................................................(((((..((((((..((....((((...............))))....))..))))))..)))))..(((((..(((((((.....)))))))...(((.((((((((.(((......))).)))))))).)))))).))..........................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787
.................................................................................................................................................................................TGTGTGTGTGTGTGAACTCTG....................................................2124.000.00--6.003.00-2.00-3.00-2.001.00--1.001.00-----1.00-----1.00------1.001.00--------1.00-------------
..................................................................................................................................................................................GTGTGTGTGTGTGAACTCTG....................................................2014.000.00-----2.00---1.002.00---1.00---2.00--1.001.001.00-------------1.001.00--1.00---------------
................................................................................................................................................................................GTGTGTGTGTGTGTGAACTCTG....................................................2210.000.00--1.00--------1.00-1.00-----------1.00---1.00------1.00--1.00-----1.00---1.001.00------
...........................................................TTAATGGGAGTAATGCTTT............................................................................................................................................................................197.000.00------4.00-3.00------------------------------------------------
.............................................................................CAATTAAATTTAAAACTTTTTTTTTTCATT...............................................................................................................................................305.000.003.00---1.00------------1.00---------------------------------------
.............................................................................CAATTAAATTTAAAACTTTTTTTTTTTCATTG.............................................................................................................................................3215.005.002.00---3.00----------------------------------------------------
...............................................................................................................................................................................................................AATTCCACTCGGTGGTACATGCC....................2312.002.00-------------------2.00-------------------------------------
...............................................................................................................................................................................GGTGTGTGTGTGTGTGAACTCTG....................................................232.000.00---2.00-----------------------------------------------------
..........................................................................................................................................................................................................AGAGGAATTCCACTCGGTG.............................1912.002.00----------------------------1.00-----------------1.00----------
..........................................................................................................................................................................TTTGGGGTGTGTGTGTGTGTGAACCC......................................................262.000.00-2.00-------------------------------------------------------
.........................................................................................AAACTTTTTTTTTTTCAATG.............................................................................................................................................201.000.001.00--------------------------------------------------------
.................................................................................................................................................................................TGTGTGTGTGTGTGAACTCTTAG..................................................2311.001.00------------------------------------------1.00--------------
.....................................................................................TTTAAAACTTTTTTTTTTTCATATT............................................................................................................................................251.000.00-----------------------------------------------------1.00---
...................................................................................................................................................AACAGGCATATTTGGGAATTTTGTT..............................................................................2511.001.00--------------------------------1.00------------------------
.............................................................................CAATTAAATTTAAAACTTTTTTTTTCATT................................................................................................................................................291.000.00----1.00----------------------------------------------------
...........................................................................................................................................................................TTGGGGTGTGTGTGTGTGTGAAC........................................................2311.001.00-1.00-------------------------------------------------------
...........................................................................................ACTTTTTTTTTTTCATTGAAGGGATG.....................................................................................................................................2611.001.00-1.00-------------------------------------------------------
...........................................................................................ACTTTTTTTTTTTCATTGGTGG.........................................................................................................................................221.000.00----------------1.00----------------------------------------
......................................................................................................................................................................................................AGGCAGAGGAATTCCACTCGGTGG............................2411.001.00---------------------------1.00-----------------------------
.............................................................................CAATTAAATTTAAAACTTTTTTTTCATT.................................................................................................................................................281.000.00----------------------------------------------------1.00----
......................................................................................................................................................................................GTGTGTGTGAACTCTTAGGCAG..............................................2211.001.00--------------------------------------------1.00------------
.........................................................TCTTAATGGGAGTAATGCTTT............................................................................................................................................................................211.000.00---------------1.00-----------------------------------------
.........TTTTTAATATATTAACGAC..............................................................................................................................................................................................................................191.000.00------------------------1.00--------------------------------
.............................................................................................................................................................................GGGGTGTGTGTGTGTGTGAACTCTG....................................................251.000.00-----------1.00---------------------------------------------
...................................................................................................................................................................AATTTTGTTTGGGGTGTGTGTGTGTGAAC..........................................................291.000.00-1.00-------------------------------------------------------
...............................................................................................................................................................................................................AATTCCACTCGGTGGTACATG......................2111.001.00------------1.00--------------------------------------------
..............................................................................................................................................................................GGGTGTGTGTGTGTGTGAACTCTG....................................................241.000.00---------------------------------------------------1.00-----
...................................................................................................................................................................................TGTGTGTGTGTGAACTCTTAGGCAGAGGAA.........................................3011.001.00-----------------------------------1.00---------------------
.............................................................................CAATTAAATTTAAAACTTTTTTTTTTTCATGG.............................................................................................................................................321.000.001.00--------------------------------------------------------
..............................................................................AATTAAATTTAAAACTTTTTTTTTTTCATTG.............................................................................................................................................3111.001.001.00--------------------------------------------------------
...........................................................TTAATGGGAGTAATGCTTG............................................................................................................................................................................191.000.00---------------1.00-----------------------------------------
......................................................................................................................................................................................................................CTCGGTGGTACATGCCCTCTTGGAG...........2511.001.00------------------------------1.00--------------------------
.............................................................................................................................................................TTTGGGAATTTTGTTTAGGC.........................................................................201.000.00----------------------------------------1.00----------------
.................................................................................................................................AGTTTTGTAAATTGTGCCAGG....................................................................................................211.000.00------------------------------------------------1.00--------
.AGGCTTTTTTTTTAATTTTC.....................................................................................................................................................................................................................................201.000.00-1.00-------------------------------------------------------
.....................................................................................TTTAAAACTTTTTTTTTTTCATATTG...........................................................................................................................................261.000.001.00--------------------------------------------------------
.................................................................................................................................................................................TGTGTGTGTGTGTGAACTCTTAGGCAGAG............................................2911.001.00-------------------------------1.00-------------------------
.............................................................................CAATTAAATTTAAAACTTTTTTTTTTTCATTA.............................................................................................................................................321.000.00-----------------1.00---------------------------------------
................................................................................................TTTTTTTTCATTGAAGGGATG.....................................................................................................................................2111.001.00-1.00-------------------------------------------------------
..........................................................................................................................................................................................................................................TGGAGTGGCTGGCTGA1620.500.50------------------------------------------------------0.50--
.......................................................................................................................................................................................................................................TCTTGGAGTGGCTGG....1560.170.17-------------------------------------------------------0.17-
.......................................................................................................................................................................................................................................TCTTGGAGTGGCTGGTCCC1960.170.17--------------------------------------------------------0.17

Antisense strand
TAGGCTTTTTTTTTAATATATTAAGTGTTTTCTTGTAAAATATGTGTATCTCTATCTTCTTAATGGGAGTAATGAAGCAATTAAATTTAAAACTTTTTTTTTTTCATTGAAGGGATGAATCCACTATACAGTTTTGTAAATTGTGCTAACAGGCATATTTGGGAATTTTGTTTGGGGTGTGTGTGTGTGTGAACTCTTAGGCAGAGGAATTCCACTCGGTGGTACATGCCCTCTTGGAGTGGCTGGCTGA
....................................................(((((..((((((..((....((((...............))))....))..))))))..)))))..(((((..(((((((.....)))))))...(((.((((((((.(((......))).)))))))).)))))).))..........................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787
...................................................................AGTAATGAAGCAATTAAAA.................................................................................................................................................................... 191.000.00-----------------------------------------------1.00---------
...............................................................................................................................................................................................................AATTCCACTCGGTGGTGTA........................ 191.000.00------------1.00--------------------------------------------