| (1) B-CELL | (1) BRAIN | (1) BREAST | (10) CELL-LINE | (1) OTHER | (1) TESTES |
| GCATATGAAAGAATTCAAGGTTTTGAGTCGGTTCAGGTCACCCAATTTCGGTAAGTAACACAATGGTCTTAGAAGGGCATCCCCAGAATTGGGCACCAGTTCTGCAAAAGGCAGAGTGCTGTTTTTAGGTGACCCTGACAGAAAACAGGACAGAAGTCATCTTTATAGTAGGATTTTTACTAAGTGAACAAGGATCTGTGATGCTTTAAAAAGTCTGAAGAGTAAAGCCTAGATTCTCACTTAAATGAGTTTAGGACCTTAAATTTTTTTTTTTTTTTGACAGAATGTCACTCTTGTCGCCCAAGTTGGAGTGCAATGGCACAATCTAGGCTC ..................................................................................................................................................................((((((.......(((((...))))).......))))))....((((((((...(((((((.((((((((((((..........)))))))))..)))..)))))))...))))))))..................................................... ..................................................................................................................................................................163.....................................................................................................................283................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR189785 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR553576(SRX182782) source: Testis. (testes) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR191550(GSM715660) 27genomic small RNA (size selected RNA from t. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................GTAGGATTTTTACTATC..................................................................................................................................................... | 17 | 14.00 | 0.00 | 14.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AGTAGGATTTTTACTATC..................................................................................................................................................... | 18 | 6.00 | 0.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................................................TTAAATTTTTTTTTTTTTTCAAG.................................................... | 23 | 5.00 | 0.00 | - | - | 1.00 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................ACCTTAAATTTTTTTTTTTTTTTAG..................................................... | 25 | 3.00 | 0.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................CCTTAAATTTTTTTTTTTTTTCAAG.................................................... | 25 | 2.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................ACCTTAAATTTTTTTTTTTTTTTTAG.................................................... | 26 | 2.00 | 0.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................ACCTTAAATTTTTTTTTTTTTTTTTAG................................................... | 27 | 2.00 | 0.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................CCTTAAATTTTTTTTTTTTTTTAAG.................................................... | 25 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................CTTAAATTTTTTTTTTTTTTCTG..................................................... | 23 | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................ACCTTAAATTTTTTTTTTTTTTTTTAT................................................... | 27 | 2.00 | 0.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................ACCTTAAATTTTTTTTTTTTAG........................................................ | 22 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................CCTTAAATTTTTTTTTTTAAG........................................................ | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................................................................................................CGCCCAAGTTGGAGTGAA.................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................CCTTAAATTTTTTTTTTTTCAAG...................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................CCTTAAATTTTTTTTTTTTTTCAAT.................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................................................TTAAATTTTTTTTTTTTTTTGTTTT.................................................. | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ....................................................................................................................................................................................................................................................................AAATTTTTTTTTTTTTTTGTTCT.................................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................ACCTTAAATTTTTTTTTTTTTAG....................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................................................GTCGCCCAAGTTGGAGTG.................... | 18 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................ATTTTTTTTTTTTTTTGACCC.................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................CCTTAAATTTTTTTTTTTTTG........................................................ | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................CCTTAAATTTTTTTTTTTTTTTCAAG................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................ACCTTAAATTTTTTTTTTTTTTTTTTA................................................... | 27 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................................................ATTTTTTTTTTTTTTTGACCGGG................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................CTTAAATTTTTTTTTTTTTTCCG..................................................... | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................................................AATTTTTTTTTTTTTTTGACCCCG................................................ | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................................................................................................GAGTGCAATGGCACAAGCGA..... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................................................GCCCAAGTTGGAGTGCAATGCCG............ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| .................................................................................................................................................................................TACTAAGTGAACAAGGATCTGTGATGC................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................................................................................CCTTAAATTTTTTTTTTTTTTTG...................................................... | 23 | 5 | 0.40 | 0.40 | - | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCATATGAAAGAATTCAAGGTTTTGAGTCGGTTCAGGTCACCCAATTTCGGTAAGTAACACAATGGTCTTAGAAGGGCATCCCCAGAATTGGGCACCAGTTCTGCAAAAGGCAGAGTGCTGTTTTTAGGTGACCCTGACAGAAAACAGGACAGAAGTCATCTTTATAGTAGGATTTTTACTAAGTGAACAAGGATCTGTGATGCTTTAAAAAGTCTGAAGAGTAAAGCCTAGATTCTCACTTAAATGAGTTTAGGACCTTAAATTTTTTTTTTTTTTTGACAGAATGTCACTCTTGTCGCCCAAGTTGGAGTGCAATGGCACAATCTAGGCTC ..................................................................................................................................................................((((((.......(((((...))))).......))))))....((((((((...(((((((.((((((((((((..........)))))))))..)))..)))))))...))))))))..................................................... ..................................................................................................................................................................163.....................................................................................................................283................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR189785 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR553576(SRX182782) source: Testis. (testes) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR191550(GSM715660) 27genomic small RNA (size selected RNA from t. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................AGTAGGATTTTTACTTCAG.................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................TTGGAGTGCAATGGCACAT......... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| .................................................................................................................................................................................................................................................................................................................TTGGAGTGCAATGGCACAATCTTCAA.. | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ............................................................................................................................................................TCATCTTTATAGTAGGAA............................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ..............................................................................................................GCAGAGTGCTGTTTTTAAA............................................................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................GCAGAGTGCTGTTTTTAAAA........................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |