ID: uc003oxo.2_intron_10_0_chr6_45290705_r.3p
GENE: (2)
chr6:45290655-45290904-


(1)
AGO2.ip
(1)
B-CELL
(1)
BRAIN
(5)
BREAST
(5)
CELL-LINE
(1)
FIBROBLAST
(5)
HEART
(2)
HELA
(1)
OTHER
(28)
SKIN
(1)
TESTES

Sense strand
AGAATAGAGAAGATTGTAAGTTAGTGTTACTTATGAAGGATTCCCCTCTGAGCATTCCAGTATATAAATTGTCAGTGTTTTGTTTCACAACCGGCACAGTAATTGTCATCTCATAATTTAAACATGAATATCATCGTATGTCTGTCTGTATCTCTATTAAGGATGATTTGCTTAATTGTTTGAAGTTTTTTCTCCTTTAGAAACTGCTTATCAATAACAGCTGTAGCACTGTGGCTTTTCTCCATGGACT
........................................................................................................(((((((..((((....(((.((....(((...)))....)))))......)))).)))))))................(((((((........))))))).............................................
.....................................................................................................102.....................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577588(Rovira)
total RNA. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
TAX577746(Rovira)
total RNA. (breast)
..........................................................................................................CATCTCATAATTTAAACATGAAT.........................................................................................................................23114.0014.001.001.002.003.003.00-1.00--------1.00---------1.001.00-------------------------
............................................................................................................TCTCATAATTTAAACATGAAT.........................................................................................................................2118.008.003.00-1.00-------1.00--------1.00---1.00------------------1.00---------
...............................................................................................................CATAATTTAAACATGAAT.........................................................................................................................1827.507.50--0.50---0.500.50--1.000.500.50--------------------------1.00----1.00--0.500.500.500.50-
.............................................................................................................CTCATAATTTAAACATGAAT.........................................................................................................................2016.006.00-2.00---1.00-2.00-------------------------1.00------------------
...........................................................................................................ATCTCATAATTTAAACATGAAT.........................................................................................................................2214.004.00-----------1.00--1.00-1.00---1.00-------------------------------
..............................................................................................................TCATAATTTAAACATGAAT.........................................................................................................................1914.004.00-----2.00---------------1.00------------------1.00-----------
.........................................................................................ACCGGCACAGTAATTGTC...............................................................................................................................................1813.003.00---------2.00---------------------------------1.00--------
...........................................................................................CGGCACAGTAATTGTC...............................................................................................................................................1613.003.00------------1.00----------------1.00------1.00---------------
................................................................................TGTTTCACAACCGGCACAGTAATTGTC...............................................................................................................................................2711.001.00---------------------------------------------1.00------
.......................................................................................................................................................................................AGTTTTTTCTCCTTTACAG................................................191.000.00--------------------------------1.00-------------------
......................................................................................................................................CGTATGTCTGTCTGTAGGG.................................................................................................191.000.00----------------------------1.00-----------------------
................................................................................................................ATAATTTAAACATGAATATCA.....................................................................................................................2111.001.00------------------------------1.00---------------------
...........................................................................................................................................GTCTGTCTGTATCTCTAAAG...........................................................................................201.000.00-------------------------------------1.00--------------
.........................................................................................................TCATCTCATAATTTAAACATGAAT.........................................................................................................................2411.001.00--------1.00-------------------------------------------
............................................................................GTTTTGTTTCACAACCGGCACAGTAATTGTC...............................................................................................................................................3111.001.00------1.00---------------------------------------------
.................................................................................................................TAATTTAAACATGAATATCA.....................................................................................................................2011.001.00-----------------------------------------1.00----------
..........................................................................................CCGGCACAGTAATTGTC...............................................................................................................................................1711.001.00----------------------1.00-----------------------------
...................................................................................................TAATTGTCATCTCATAATTTAAACATGAATATCA.....................................................................................................................3411.001.00-------------1.00--------------------------------------
...ATAGAGAAGATTGTAGTCT....................................................................................................................................................................................................................................191.000.00----------------------------------1.00-----------------
..........................................................................................................CATCTCATAATTTAAACATGAATATCA.....................................................................................................................2711.001.00--------------------------------------1.00-------------
......................................................................GTCAGTGTTTTGTTTCCTTG................................................................................................................................................................201.000.00-----------------------------------1.00----------------
....TAGAGAAGATTGTAAGTCAAT.................................................................................................................................................................................................................................211.000.00---------------------------1.00------------------------
......................................................................................................................................................................TTTGCTTAATTGTTTTAA..................................................................181.000.00----------------------------------------------1.00-----
.......................................................................................................................................................................................................................AACAGCTGTAGCACTGTGGCTTCTCC.........261.000.00-------------------------------1.00--------------------
...................................................................................................................ATTTAAACATGAATATCA.....................................................................................................................1830.330.33-------------0.33--------------------------------------
................................................................................................................ATAATTTAAACATGAATA........................................................................................................................1840.250.25-----------------------------------------------0.25----
....................................................................................................................TTTAAACATGAATATCA.....................................................................................................................1760.170.17---------------------------------------------------0.17
................................................................................................................ATAATTTAAACATGAAT.........................................................................................................................1760.170.17-----------0.17----------------------------------------

Antisense strand
AGAATAGAGAAGATTGTAAGTTAGTGTTACTTATGAAGGATTCCCCTCTGAGCATTCCAGTATATAAATTGTCAGTGTTTTGTTTCACAACCGGCACAGTAATTGTCATCTCATAATTTAAACATGAATATCATCGTATGTCTGTCTGTATCTCTATTAAGGATGATTTGCTTAATTGTTTGAAGTTTTTTCTCCTTTAGAAACTGCTTATCAATAACAGCTGTAGCACTGTGGCTTTTCTCCATGGACT
........................................................................................................(((((((..((((....(((.((....(((...)))....)))))......)))).)))))))................(((((((........))))))).............................................
.....................................................................................................102.....................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577588(Rovira)
total RNA. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
TAX577746(Rovira)
total RNA. (breast)
...........................................................................................................................................GTCTGTCTGTATCTCTGATC........................................................................................... 202.000.00-----------------1.00------1.00---------------------------
..........................................................................................................................................TGTCTGTCTGTATCTCAGC............................................................................................. 191.000.00------------------1.00---------------------------------
..........................................................................................................................................TGTCTGTCTGTATCTGGC.............................................................................................. 181.000.00--------1.00-------------------------------------------