ID: uc003ovt.1_intron_0_0_chr6_43589177_r
GENE: (12)
chr6:43589127-43589547-


(2)
AGO2.ip 		(4)
B-CELL 		(3)
BRAIN 		(8)
BREAST 		(19)
CELL-LINE 		(3)
HEART 		(2)
HELA 		(3)
LIVER 		(1)
OTHER 		(19)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
TGACCACTTATTTGCTGCAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTTCTGAACCCTTCAGGCAGGGACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAG
...................................................................................................................................................................................(((......)))......(((((((.(((.((((((((......))))))))..........(((....)))...)))...((.(((((((((((((.((.....)))))))).))).)))))).)))))))..............................................................................................................
...................................................................................................................................................................................180.................................................................................................................................312...........................................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		GSM359178(GSM359178)
hela_nucl_t. (hela)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
.......................................................................................................................................................................................ACATGGGCTTCTGAACCCTTCAGGCAGGGA................................................................................................................................................................................................................3015.005.005.00----------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................ATAGGCTAGGGAGAGAGGGGTGCTGT.........................................................................................................2615.005.00-5.00---------------------------------------------------------------
........................................................................................................................................................................................CATGGGCTTCTGAACTCTG..........................................................................................................................................................................................................................194.000.00------1.00---------1.00-------------1.00---1.00------------------------------
.......................................................................................................................................................................................ACATGGGCTTCTGAACCCTTCAGGCAG...................................................................................................................................................................................................................2712.002.002.00----------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................AAGGGCAGTCCTGAGGGAGA............................2012.002.00-2.00---------------------------------------------------------------
.......................................................................................................................................................................................ACATGGGCTTCTGAACCCTTCAGGCAGGGACA..............................................................................................................................................................................................................3212.002.001.00---------------1.00------------------------------------------------
..........................................................................................................................................................................................TGGGCTTCTGAACCCTTCAGGCAGGGAC...............................................................................................................................................................................................................2812.002.00-------2.00---------------------------------------------------------
......................CAAACTGCGGACAGGGCAT............................................................................................................................................................................................................................................................................................................................................................................................192.000.00--2.00--------------------------------------------------------------
................................ACAGGCGAGAAGGCAGTG...................................................................................................................................................................................................................................................................................................................................................................................1812.002.00---------------2.00-------------------------------------------------
................................................................................................................................................................................................TCTGAACCCTTCAGGCAGGG.................................................................................................................................................................................................................2012.002.00-----------------2.00-----------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................GAGGGAGAAGACAGGATTCA................2012.002.00-------------------2.00---------------------------------------------
..................................................................................................................................................................................................................................................................................................ATAGGCTAGGGAGAGAGG.................................................................................................................1821.501.50-1.50---------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................GAAGACAGGATTCAGGGCA...........1911.001.00------------------------------------1.00----------------------------
..........................................................................................................................................................................................TGGGCTTCTGAACCCTTCAGGCAGGGACAGTTCT.........................................................................................................................................................................................................3411.001.00---------1.00-------------------------------------------------------
........................................................................................................................................................................................................................TTCTATTGCTGTCCCATG...........................................................................................................................................................................................181.000.00----------1.00------------------------------------------------------
.............................................................................................................................................................................................................................................................GGCCATGCTGCCCTGCCATTGGCGGG..............................................................................................................................................261.000.00-----1.00-----------------------------------------------------------
.............................................................................GAGTACCTGAAGGTGGGCGCC...................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------1.00-------------
................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGAGAAGACAGGCTAG.................201.000.00--1.00--------------------------------------------------------------
...............................................................TCCTGAAACACCCAGAGTACCTGAAGGTGGGC......................................................................................................................................................................................................................................................................................................................................3211.001.00----------------------------------------------1.00------------------
........................................................................................................................................................................................................................................................................................................................................................................................................AAGACAGGATTCAGGGCAG..........1911.001.00---------------------1.00-------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................AAGACAGGATTCAGGGCAGTGCT......2311.001.00--------------------1.00--------------------------------------------
.................CAGGACAAACTGCGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---1.00-------------------------------------------------------------
..........................................................................................................................................................................................TGGGCTTCTGAACCCTTCAGGCAGGGA................................................................................................................................................................................................................2711.001.00-------1.00---------------------------------------------------------
...................................................................................................................................................................................................................................................GGTGACTTCTGGCCATGCTGCCCTGC........................................................................................................................................................2611.001.00-1.00---------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................GGAAAGGGCAGTCCTGA..................................1711.001.00-------------------------------------------------------1.00---------
..............................................................................................................................................................................................................................................................................................GTTAATAGGCTAGGGAGAGAGG.................................................................................................................2211.001.001.00----------------------------------------------------------------
..................AGGACAAACTGCGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------1.00------------------------
...............................................................................................................................................................................CCAGGCCAACATGGGCTTCTGA................................................................................................................................................................................................................................2211.001.00-------------------------------------------------1.00---------------
............................................................................................................................................................CCATTACAGCAGGAGAAGCCC....................................................................................................................................................................................................................................................2111.001.00-----------------------1.00-----------------------------------------
...........................TGCGGACAGGCGAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................1711.001.00------------1.00----------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................GAGGGAGAAGACAGGATTC.................1911.001.00---------------------------------------1.00-------------------------
.....................................CGAGAAGGCAGTGGTACGTTTCA.........................................................................................................................................................................................................................................................................................................................................................................231.000.00------------------------------------------------1.00----------------
............................GCGGACAGGCGAGAAGTC.......................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------1.00----------------------
.............................................................................................GCGCCAAACTGCTGTTCCGG....................................................................................................................................................................................................................................................................................................................2011.001.00------1.00----------------------------------------------------------
..........................................................................CCAGAGTACCTGAAGGTGGGCGC....................................................................................................................................................................................................................................................................................................................................2311.001.00--------1.00--------------------------------------------------------
.........................................................................................................................................................................................ATGGGCTTCTGAACCCTTCAGGCAGGGACA..............................................................................................................................................................................................................3011.001.00---1.00-------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................GAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAG3611.001.001.00----------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGGGCAGTGCTCCGAAGCCG241.000.00----1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................AATAGGCTAGGGAGAGAGGGGTG.............................................................................................................2311.001.00-------------------------------1.00---------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGACAGGATTCAGGGCAGT.........2311.001.00-------------------------------------------1.00---------------------
.........................................................................................................................................................................................................TTCAGGCAGGGACAGTTCTATTGCTG..................................................................................................................................................................................................2611.001.00--------------------------------------------1.00--------------------
.................................CAGGCGAGAAGGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................171.000.00---------------------------------------------1.00-------------------
....................................................................................................................................................................................................................................................................................................................................TGCTCCCTGCCAACTTTCTGGAGA.........................................................................2411.001.00-------------1.00---------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................GAGGGAGAAGACAGGATTCAGGGC............2411.001.00---1.00-------------------------------------------------------------
....................................GCGAGAAGGCAGTGGTACGCTTA..........................................................................................................................................................................................................................................................................................................................................................................231.000.00---1.00-------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................AGGGGTGCTGTCTGCGATT.................................................................................................191.000.00--------------------------1.00--------------------------------------
........................AACTGCGGACAGGCGAGAAGGG.......................................................................................................................................................................................................................................................................................................................................................................................221.000.00-----------1.00-----------------------------------------------------
.................................................................................................................................................................................................................................................................ATGCTGCCCTGCCATTGGC.................................................................................................................................................1911.001.00-----------------------------------1.00-----------------------------
....................................................................................................................................................................................CCAACATGGGCTTCTGAA...............................................................................................................................................................................................................................1811.001.00--------1.00--------------------------------------------------------
....................................................................................................................................................TGTACAAGCCATTACAGCAGGAGA.........................................................................................................................................................................................................................................................2411.001.00------------------------1.00----------------------------------------
.....................ACAAACTGCGGACAGGCGAGAAGGCAGTG...................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-------------1.00---------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGAGAAGACAGGACTGG................211.000.00--------------------------------------------------1.00--------------
.......................................................................................AGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTG.............................................................................................................................................................................................................................................................................................................3311.001.00----1.00------------------------------------------------------------
..................................................................................................................................................................................................................................................AGGTGACTTCTGGCCATGC................................................................................................................................................................1911.001.00------------------------------------------------------1.00----------
................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGAGAAGACAGGATAG.................201.000.00--1.00--------------------------------------------------------------
.........................ACTGCGGACAGGCGAGAAGGCAG.....................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----1.00-----------------------------------------------------------
..........................CTGCGGACAGGCGAGAAGGCAGTG...................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----1.00-----------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGAGAAGACAGGCAG..................191.000.00--1.00--------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................GAAAGGGCAGTCCTGAGGGAGA............................2211.001.00------1.00----------------------------------------------------------
..................AGGACAAACTGCGGACAGGCGAGAAGG........................................................................................................................................................................................................................................................................................................................................................................................2711.001.001.00----------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................GGGAGAAGACAGGATTCAGGGCC...........231.000.00------------------1.00----------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................CCTGCCAACTTTCTGGAGAGGTGCCAA.................................................................2711.001.00-----1.00-----------------------------------------------------------
..................................................................................................................................................................................................................................................AGGTGACTTCTGGCCATG.................................................................................................................................................................1811.001.00-----------1.00-----------------------------------------------------
..................AGGACAAACTGCGGACAGGCGAGAAGGCAGT....................................................................................................................................................................................................................................................................................................................................................................................3111.001.00--------------------------------------------------------1.00--------
...................................................................................................................................................................................................................................................................................CGGCTCTGTGTGTTAATAGGC.............................................................................................................................2111.001.00---------1.00-------------------------------------------------------
.......................................................................................................................................................................................ACATGGGCTTCTGAACCCTTCAGGCAGGG.................................................................................................................................................................................................................2911.001.001.00----------------------------------------------------------------
.......................................................................................................................................................................................ACATGGGCTTCTGAACCCTTCAGG......................................................................................................................................................................................................................2411.001.00-----------------------------------------------1.00-----------------
.............................................................................................................................................TCACTGATGTACAAGCCATT....................................................................................................................................................................................................................................................................2011.001.00--------------1.00--------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................AGGGCAGTCCTGAGGGAGAAGACAGGACTC.................301.000.00----------1.00------------------------------------------------------
..................AGGACAAACTGCGGACAGGCGAGAAGGCAGTGG..................................................................................................................................................................................................................................................................................................................................................................................3311.001.00---------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................CTGAGGGAGAAGACAGCC....................181.000.00----1.00------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGAGAAGACAGCC....................171.000.00-------------------------1.00---------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGAGAAGACAGGATCT.................201.000.00--1.00--------------------------------------------------------------
....................................GCGAGAAGGCAGTGGTACGTTTC..........................................................................................................................................................................................................................................................................................................................................................................2311.001.00---1.00-------------------------------------------------------------
..........................CTGCGGACAGGCGAGAAGGCAG.....................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------------------------1.00-----------
.....................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGACAGGATTCAGGG.............1911.001.001.00----------------------------------------------------------------
.............................CGGACAGGCGAGAAGGCAGT....................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------------------------1.00-----------------------
..............................................................................................................................................................ATTACAGCAGGAGAAGCCCAGGC................................................................................................................................................................................................................................................2311.001.00------------1.00----------------------------------------------------
.......................AAACTGCGGACAGGCGAGAAGGCA......................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------1.00----------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGAAGACAGGATTCAG...............2011.001.00-----------1.00-----------------------------------------------------
..................................................................................................................................................................................................................................................AGGTGACTTCTGGCCAT..................................................................................................................................................................1711.001.00-------------------------------------1.00---------------------------
.................................................................................................................................................................................................................................................................................................................................................CTTTCTGGAGAGGTGCCAAA................................................................2011.001.00----------------------------------------------------1.00------------
.........................ACTGCGGACAGGCGAGAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-1.00---------------------------------------------------------------
.................................................................................................CAAACTGCTGTTCCGGGA..................................................................................................................................................................................................................................................................................................................1811.001.00--------1.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................................................ATAGGCTAGGGAGAGAGGGGTGATGT.........................................................................................................261.000.00-1.00---------------------------------------------------------------
........................................................................................................................................................................................CATGGGCTTCTGAACCCTTCAGGCAG...................................................................................................................................................................................................................2611.001.00-------1.00---------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................TGAGGGAGAAGACAGGATTCAGGGC............2511.001.00----------------------------1.00------------------------------------
....................................................................................................................................TCGGCCATGTCACTGATGTACAA..........................................................................................................................................................................................................................................................................2311.001.00--------------------------------1.00--------------------------------
..........................................................................................................................................................................................TGGGCTTCTGAACCCTTCAGGCAG...................................................................................................................................................................................................................2411.001.00----------------------1.00------------------------------------------
..........................CTGCGGACAGGCGAGAAGGCA......................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------1.00-------------------------------------
...............................................................................................................................................................................................................................................................................TTGGCGGCTCTGTGTGTTA...................................................................................................................................1911.001.00---------------------------------1.00-------------------------------
......................................................................................................................................................................................................................................................GACTTCTGGCCATGCTG..............................................................................................................................................................1730.670.67-0.67---------------------------------------------------------------
...........................................................................................................................................................................................................CAGGCAGGGACAGTTCT.........................................................................................................................................................................................................1720.500.50------------------------------------------------------------0.50----
.................................................................................................................................................................................................................................................................................................AATAGGCTAGGGAGAGAGG.................................................................................................................1920.500.50---------------------0.50-------------------------------------------
.........................................................................................................................................................................................................TTCAGGCAGGGACAGTTCT.........................................................................................................................................................................................................1920.500.50-----0.50-----------------------------------------------------------
..........................CTGCGGACAGGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................1620.500.50--------------------0.50--------------------------------------------
...........................................................................................................................................................................................................CAGGCAGGGACAGTTCTA........................................................................................................................................................................................................1820.500.50----------------------------------------------------------0.50------
.....................................................................................................CTGCTGTTCCGGGAGGG...............................................................................................................................................................................................................................................................................................................1720.500.50------------0.50----------------------------------------------------
.................................................................................................................................................................................................................................................................................................AATAGGCTAGGGAGAGAG..................................................................................................................1820.500.50----0.50------------------------------------------------------------
.......................................................................................................................................................................................ACATGGGCTTCTGAACC.............................................................................................................................................................................................................................1730.330.33-------------------------------------------------------------0.33---
..................AGGACAAACTGCGGA....................................................................................................................................................................................................................................................................................................................................................................................................1530.330.33----------------------0.33------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................CTGAGGGAGAAGACAGGA....................1840.250.250.25----------------------------------------------------------------
.........................................................................................................................................................................................................................TCTATTGCTGTCCCT.............................................................................................................................................................................................1570.140.14--------------------------------------------------------------0.14--
......................................................................................................................................................................AGGAGAAGCCCAGGCC...............................................................................................................................................................................................................................................1670.140.14----------------------------------------------------------------0.14

Antisense strand
TGACCACTTATTTGCTGCAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTTCTGAACCCTTCAGGCAGGGACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCGGCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAACTTGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAG
...................................................................................................................................................................................(((......)))......(((((((.(((.((((((((......))))))))..........(((....)))...)))...((.(((((((((((((.((.....)))))))).))).)))))).)))))))..............................................................................................................
...................................................................................................................................................................................180.................................................................................................................................312...........................................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		GSM359178(GSM359178)
hela_nucl_t. (hela)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
.........................................................................................................................................................................................................................................................................................................................................................................................CTTCTCCCTCAGGACTGC.......................... 1821.001.00---------------------------------------------------------0.50-0.50-----
....................................................................................................................................................................................................................................................................................................................................................................................TTCTCCCTCAGGACTGCCCTTT........................... 2211.001.00--------------------------------------1.00--------------------------
..................................................................................................CTCCCGGAACAGCAGTTT................................................................................................................................................................................................................................................................................................................. 1811.001.00--------------1.00--------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................AGGACTGCCCTTTCCTGGCCACACC.................................... 2511.001.00----------1.00------------------------------------------------------
........................AACTGCGGACAGGCGCCT........................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-----------------------------1.00-----------------------------------
............................................................................................................................................................GGCCTGGGCTTCTCCTGCTGTAATGG............................................................................................................................................................................................................................................... 2611.001.00----1.00------------------------------------------------------------
........................................................GTTTCAGGAAGCGGAA............................................................................................................................................................................................................................................................................................................................................................. 1611.001.00------1.00----------------------------------------------------------
................................................................................................................................................TGGCTTGTACATCAG...................................................................................................................................................................................................................................................................... 1570.140.14---------------------------------------------------------------0.14-