ID: uc003osm.1_intron_4_0_chr6_42797911_f.5p
GENE: KIAA0240(5)
chr6:42797861-42798110+


(1)
AGO2.ip 		(9)
BRAIN 		(1)
BREAST 		(13)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(1)
LIVER 		(2)
OTHER 		(3)
SKIN

Sense strand
CCTTCAGTAACACACCTGGAACAGGAACCCAGCAACAATTCTTCTGCCAGGTAATGCCCTTTCCCAAATAAATATTTGGCTGATTATAGAATGGAAAAATGAGATGTGTATTTACTAGAATATAATTTTCATCCTAGGCATCCAATTTCTTAAAAATTTTAGGCCAGGTGTAGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCCAAGGCTGGAGGATCACTTGAACCCAGGAGTTCGAGGCCAGC
.......................................................................((((((((((...........(((((.((((((..(((((((....)))))))..))))))....((...))..)))))...........))))))))))...(((....)))..................................................................
...................................................................68......................................................................................................................188............................................................
SizePerfect hitTotal NormPerfect NormDRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
........................................................................................................................................................................TGTAGTGGCTCATGC...................................................................15057.0057.0015.0013.0013.0013.00---3.00-------------------------
.......................................................................................................................................................................GTGTAGTGGCTCATGC...................................................................1607.007.003.001.001.001.00---1.00-------------------------
........................................................................................................................................................................TGTAGTGGCTCATGCC..................................................................1605.005.00-4.001.00------------------------------
.......................................................................................................................................................................GTGTAGTGGCTCATGCC..................................................................1703.003.001.00-2.00------------------------------
.........................AACCCAGCAACAATTCTTCTG............................................................................................................................................................................................................2112.002.00-----------2.00---------------------
.......................................................................................................................................................................GTGTAGTGGCTCATGCCTGTAATCC..........................................................2502.002.001.00--1.00-----------------------------
...............................................................................................................................................................................................................................ACTTGAACCCAGGAGTTCGAGGCCGTGG282.000.00----2.00----------------------------
............................................................................................................................................................................................................AGGCCAAGGCTGGAGGAT............................1801.001.00-------1.00-------------------------
.........................................................................................................................................................................GTAGTGGCTCATGCCTGTA..............................................................1901.001.00--------------------1.00------------
....................................................................................................................................................................................................ACTTTGGGAGGCCAAGGCTGGACTC.............................251.000.00----1.00----------------------------
..........................................................................................................................................................................................................................GGATCACTTGAACCCAGGAGTT..........2201.001.00-----------------------1.00---------
........................................................................................................................................................................TGTAGTGGCTCATGCCTGTAATCC..........................................................2401.001.001.00--------------------------------
.......................................................................................................................................................................................................TTGGGAGGCCAAGGCTGGAGGATCACTCG......................291.000.00------1.00--------------------------
.........................................................................................................................................................................................................GGGAGGCCAAGGCTGGACGA.............................201.000.00---------------------1.00-----------
..................................................................................................................................................................................................ACACTTTGGGAGGCCAAGGCTGGAGC..............................261.000.00----1.00----------------------------
.......................................................................................................................................................................GTGTAGTGGCTCATGCCTGTAATCCC.........................................................2601.001.00-1.00-------------------------------
..................................................................................................................................................................................................................AGGCTGGAGGATCACTTGAA....................2001.001.00-------------------------------1.00-
................................................................................................................................................................................................................CAAGGCTGGAGGATCTCTA.......................191.000.00------------------1.00--------------
..................................................................................................................................................................................................................AGGCTGGAGGATCACTTGA.....................1901.001.00-----------------------------1.00---
....................................................................................................................................................................................................ACTTTGGGAGGCCAAGGCTGGAGGATCACTC.......................311.000.00----1.00----------------------------
........................................................................................................................................................................................................TGGGAGGCCAAGGCTGGAGGATCACTCG......................281.000.00------1.00--------------------------
....................................................................................................................................................................................................ACTTTGGGAGGCCAAGGCTGGAGGAAGC..........................281.000.00----1.00----------------------------
..................................................................................................................................................................................................................AGGCTGGAGGATCACTTGGTCC..................221.000.00---------------1.00-----------------
........................................................................................................................................................................................................TGGGAGGCCAAGGCTGGAGAACA...........................231.000.00------------------------1.00--------
................................CAACAATTCTTCTGCCAGG.......................................................................................................................................................................................................1911.001.00-------------------------1.00-------
........................................................................TATTTGGCTGATTATTTT................................................................................................................................................................181.000.00--------------------------------1.00
.................................................................................................................................................................................................................AAGGCTGGAGGATCACTTGAACCCA................2570.140.14--------------0.14------------------

Antisense strand
CCTTCAGTAACACACCTGGAACAGGAACCCAGCAACAATTCTTCTGCCAGGTAATGCCCTTTCCCAAATAAATATTTGGCTGATTATAGAATGGAAAAATGAGATGTGTATTTACTAGAATATAATTTTCATCCTAGGCATCCAATTTCTTAAAAATTTTAGGCCAGGTGTAGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCCAAGGCTGGAGGATCACTTGAACCCAGGAGTTCGAGGCCAGC
.......................................................................((((((((((...........(((((.((((((..(((((((....)))))))..))))))....((...))..)))))...........))))))))))...(((....)))..................................................................
...................................................................68......................................................................................................................188............................................................
SizePerfect hitTotal NormPerfect NormDRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................CCCAGCAACAATTCTCATC............................................................................................................................................................................................................ 196.000.00-----1.00--1.002.00--1.001.00-------------------
..........................ACCCAGCAACAATTCTATCT............................................................................................................................................................................................................ 202.000.00----------1.00-------------------1.00--
............................CCAGCAACAATTCTTCTCTAT......................................................................................................................................................................................................... 211.000.00--------------------------1.00------
.................................................................................................................................................................................TCATGCCTGTAATCCCAACCAA................................................... 221.000.00----------------1.00----------------
.....................................ATTCTTCTGCCAGGTAGC................................................................................................................................................................................................... 181.000.00-------------------1.00-------------
...........................CCCAGCAACAATTCTCGTC............................................................................................................................................................................................................ 191.000.00-----1.00---------------------------
........................................................................................................................................................................................................................GAGGATCACTTGAACCCAGGAGTAAGC....... 271.000.00------1.00--------------------------
...........................CCCAGCAACAATTCTCATA............................................................................................................................................................................................................ 191.000.00-----1.00---------------------------
....................................................................................................................................................................................TGCCTGTAATCCCAACACTAACC............................................... 231.000.00----1.00----------------------------
...........................CCCAGCAACAATTCTAATT............................................................................................................................................................................................................ 191.000.00---------1.00-----------------------
..........................ACCCAGCAACAATTCTAT.............................................................................................................................................................................................................. 181.000.00-----1.00---------------------------
...........................................................TTTCCCAAATAAATATAGT............................................................................................................................................................................ 191.000.00---------------------------1.00-----
.......................................................................................................................................................................................................................................CTGGCCTCGAACTCCTGG. 1801.001.00--1.00------------------------------
..........................ACCCAGCAACAATTCTACC............................................................................................................................................................................................................. 191.000.00----------1.00----------------------
..........................ACCCAGCAACAATTCTATAT............................................................................................................................................................................................................ 201.000.00--------1.00------------------------
..........................ACCCAGCAACAATTCTGTT............................................................................................................................................................................................................. 191.000.00-----1.00---------------------------
..........................ACCCAGCAACAATTCTCCT............................................................................................................................................................................................................. 191.000.00--------1.00------------------------
.......................................................................................................................................................................................................TTGGGAGGCCAAGGCTGGAGGATGGC......................... 261.000.00------1.00--------------------------
...........................CCCAGCAACAATTCTG............................................................................................................................................................................................................... 161.000.00-----------------1.00---------------
...........................CCCAGCAACAATTCTCCTT............................................................................................................................................................................................................ 191.000.00-------------1.00-------------------
..........................................................................................................................................................................................................................GGATCACTTGAACCCAACA............. 191.000.00--------------1.00------------------
...........................CCCAGCAACAATTCTCACC............................................................................................................................................................................................................ 191.000.00-----1.00---------------------------
.................................................................................................................................................................................TCATGCCTGTAATCCCAACACTTTCAA.............................................. 271.000.00----------------------------1.00----
..........................ACCCAGCAACAATTCTGTCT............................................................................................................................................................................................................ 201.000.00-----1.00---------------------------
...................................................................................................................................................................................................................................GCCTCGAACTCCTGGGTTC.... 1901.001.00-1.00-------------------------------
......................................................................................................................................................................GGTGTAGTGGCTCATGCCTGTAAGGCT......................................................... 271.000.00----1.00----------------------------
.......................................................................................................................................................................................CTGTAATCCCAACACTTTGGGAGCAGC........................................ 271.000.00----------------------1.00----------
....................................................................................................................................................................CAGGTGTAGTGGCTCATGCCTGTACG............................................................ 261.000.00----1.00----------------------------
....................................................................................................................................................................................TGCCTGTAATCCCAACACTAGCG............................................... 231.000.00------1.00--------------------------
..........................ACCCAGCAACAATTCTCAAC............................................................................................................................................................................................................ 201.000.00-----1.00---------------------------
..........................ACCCAGCAACAATTCTATA............................................................................................................................................................................................................. 191.000.00--------1.00------------------------
...........................CCCAGCAACAATTCTGGT............................................................................................................................................................................................................. 181.000.00----------1.00----------------------
...........................CCCAGCAACAATTCTCTTT............................................................................................................................................................................................................ 191.000.00-----1.00---------------------------
.............................................................................................................................................................................................................GGCCAAGGCTGGAGGATCACTCTTG.................... 251.000.00----1.00----------------------------
...........................CCCAGCAACAATTCTGGTC............................................................................................................................................................................................................ 191.000.00------------1.00--------------------
......................................................................................................................................................................GGTGTAGTGGCTCATGCCTGTGGCA........................................................... 251.000.00------1.00--------------------------
..................................................................................................................................................................GCCAGGTGTAGTGGCTCATGCCTGTGCC............................................................ 281.000.00----1.00----------------------------
..............................................................................................................................................................................................................CCTGGGTTCAAGTGATCCTCCAGCCTTGGC.............. 3020.500.50--------------0.50------------------