ID: uc003opt.2_intron_5_0_chr6_41086847_f.5p
GENE: LOC221442(6)
chr6:41086797-41087046+


(1)
AGO2.ip 		(2)
B-CELL 		(3)
BREAST 		(4)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(1)
LIVER 		(1)
OTHER 		(33)
SKIN

Sense strand
AGCCAGCTGTTGGCTGAAATAAACTTTCTGGCACAGAAAGAAGGGCATAGGTAAAAACTCCTGCTTTCTGACTTAGTCAGAGCCTACTTCTCTTGGGGCCTCTTTCTCTTGTTAGTGAGACTCTTGTGTCATTAGATTCAGCATTCTTGGACCGGTGAAGTTAGTAACCTATGTGTCGTACAGGGGACTCCTGATGACCATAGTCATATTCACCAGGGTGTTGCCATTGATGCTGAAGGAAGCAGATTCC
.................................................................(((((((...))))))).(((((((.((.((..((...........(((((((.((....)).))))))).............)).)))).))))).))......................................................................................
..................................................51................................................................................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR040035(GSM532920)
G001T. (cervix)		SRR343337SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343336SRR189785SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189783SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR343334SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189787SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
..............................................................................................................................................ATTCTTGGACCGGTGC............................................................................................16118.0013.00--2.00-2.00--2.00--1.00---1.001.001.00-1.00--1.00----1.00--1.00--1.00-----1.00-1.00--1.00-----------
..............................................................................................................................................ATTCTTGGACCGGTG.............................................................................................15113.0013.00--2.00-1.00---1.001.001.00-1.002.00-----------------1.00---------1.00--1.00-1.00--------
.......................................................................................................................................................................................................................................GCTGAAGGAAGCAGATTGCCC219.000.009.00------------------------------------------------------
..............................................................................................................................................ATTCTTGGACCGGTGCAAG.........................................................................................1917.0013.00---2.00----1.001.00--------------------1.00--1.00-1.00-------------------
..............................................................................................................................................ATTCTTGGACCGGTGCA...........................................................................................1715.0013.00--------------1.001.00---1.001.00-------------1.00--------------------
............................................................................................................................................................................................TCCTGATGACCATAGCAAG...........................................1944.000.25-2.25---1.25-----------------------------------------0.25-----0.25-
.......................................................................................................................................................................................................................................GCTGAAGGAAGCAGATTGTTC214.000.004.00------------------------------------------------------
............................................................................................................................................GCATTCTTGGACCGG...............................................................................................1513.003.00------------1.00---------1.00--------------1.00-----------------
............................................................................................................................................................................................TCCTGATGACCATAGCGAG...........................................1942.500.25-0.75---0.500.75----------0.25-----------------------------0.25-------
.............................................................................................................................................................................................CCTGATGACCATAGTAAG...........................................182.000.00------------------------------------1.00--------1.00---------
..............................................................................................................................................ATTCTTGGACCGGTGCAA..........................................................................................1812.0013.00---1.00---------------------1.00-----------------------------
............................................................................................................................................................................................TCCTGATGACCATAGC..............................................1641.250.25-1.00---0.25-------------------------------------------------
............................................................................................................................................................................................TCCTGATGACCATAGTAATG..........................................201.000.00----------------------------1.00--------------------------
...............................................................................................................................................TTCTTGGACCGGTGAAA..........................................................................................171.000.00-----------1.00-------------------------------------------
............................................................................................................................................GCATTCTTGGACCGGC..............................................................................................1611.003.00-----------1.00-------------------------------------------
..............................................................................................................................................ATTCTTGGACCGGTGAAAGAC.......................................................................................211.000.00---1.00---------------------------------------------------
.......................................................................................................................................................................................................................................GCTGAAGGAAGCAGATTGCTC211.000.001.00------------------------------------------------------
............................................................................................................................................................................................TCCTGATGACCATAGTAGTC..........................................201.000.00------1.00------------------------------------------------
............................................................................................................................................................................................TCCTGATGACCATAGTATCT..........................................201.000.00------------------------------------------1.00------------
.........................................................CTCCTGCTTTCTGACCTGC..............................................................................................................................................................................191.000.00---------------------------1.00---------------------------
.................................................................................................................................................CTTGGACCGGTGAAGAC........................................................................................171.000.00---------------------------------------1.00---------------
............................................................................................................................................................................................TCCTGATGACCATAGCGA............................................1841.000.25-----------------------------------------------0.250.50--0.25---
............................................................................................................................................................................................TCCTGATGACCATAGCAA............................................1840.750.25-0.50---0.25-------------------------------------------------
............................................................................................................................................................................................TCCTGATGACCATAGCGAT...........................................1940.500.25------0.50------------------------------------------------
.............................GGCACAGAAAGAAGGGC............................................................................................................................................................................................................1730.330.33--------------------------------------------------0.33----
............................................................................................................................................................................................TCCTGATGACCATAGCTTT...........................................1940.250.25------------------------------------------------------0.25
............................................................................................................................................................................................TCCTGATGACCATAG...............................................1540.250.25----------------------------------------------------0.25--

Antisense strand
AGCCAGCTGTTGGCTGAAATAAACTTTCTGGCACAGAAAGAAGGGCATAGGTAAAAACTCCTGCTTTCTGACTTAGTCAGAGCCTACTTCTCTTGGGGCCTCTTTCTCTTGTTAGTGAGACTCTTGTGTCATTAGATTCAGCATTCTTGGACCGGTGAAGTTAGTAACCTATGTGTCGTACAGGGGACTCCTGATGACCATAGTCATATTCACCAGGGTGTTGCCATTGATGCTGAAGGAAGCAGATTCC
.................................................................(((((((...))))))).(((((((.((.((..((...........(((((((.((....)).))))))).............)).)))).))))).))......................................................................................
..................................................51................................................................................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR040035(GSM532920)
G001T. (cervix)		SRR343337SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343336SRR189785SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189783SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR343334SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189787SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
............................................................................................................................................CCGGTCCAAGAATGC............................................................................................... 1511.001.00------------------------1.00------------------------------
...................................................................................................................................................................................................................................TGATGCTGAAGGAAGCAGAGGAC 231.000.00-----------------1.00-------------------------------------
......................................................................................................................GACTCTTGTGTCATTCCG.................................................................................................................. 181.000.00-----------------------1.00-------------------------------
.................................................................................CCCCAAGAGAAGTAGGC........................................................................................................................................................ 1730.670.67----------------0.33--------------------------------0.33-----
.................................................................................CCCAAGAGAAGTAGGC......................................................................................................................................................... 1650.200.20------------------0.20------------------------------------