ID: uc003ops.2_intron_0_0_chr6_41068918_f.3p
GENE: (1)
chr6:41069549-41069798+


(3)
AGO1.ip
(4)
AGO2.ip
(1)
AGO3.ip
(5)
B-CELL
(1)
BRAIN
(40)
BREAST
(45)
CELL-LINE
(6)
CERVIX
(4)
HEART
(7)
HELA
(1)
KIDNEY
(4)
LIVER
(2)
OTHER
(1)
RRP40.ip
(49)
SKIN
(1)
TESTES
(1)
UTERUS
(2)
XRN.ip

Sense strand
GGGTGGTCCTTTGGATTCCCAGTGGCAGCAGCAACCAACCTGGCCCTTAGTAGTTTCTAAGTTACACCATGTTAATGGATAAAGGAATTACTCAGCTTGAAGGGATCTGTTTCCTTTACACTGGCCTGATGTGTGGGGAGAAAGGGGCCAAAAAGTTTAGGATTTGGAGTTAACATCGTAATTTCTGCTTTGTTGGTCAGGGTTTACAGCATTAATGGACAGGTTCACCCTGACCTACAAGTCGGAACGT
....................................................................................(((((.((.(((((....((.(((.((((((((((((.........)))))))).)))).)))))...))))).))))))).((.((((((..(((.....)))..))))))))....................................................
....................................................................................85.................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189782SRR037938(GSM510476)
293Red. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
GSM359193(GSM359193)
HepG2_3pM_7. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR038858(GSM458541)
MEL202. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038859(GSM458542)
MM386. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR029129(GSM416758)
SW480. (cell line)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
GSM416733(GSM416733)
HEK293. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR037931(GSM510469)
293GFP. (cell line)
SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM359204(GSM359204)
HepG2_nucl_low. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191534(GSM715644)
153genomic small RNA (size selected RNA from . (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR038862(GSM458545)
MM472. (cell line)
SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGG.................................................22157.0057.00-8.004.006.00-5.002.001.002.00-2.001.001.00--3.00------1.001.001.00--1.00-3.00--1.00----1.00-1.001.00-----------2.00---------1.00--1.00----1.00----1.00----2.00---------1.00---------------------------------------------------------------------1.001.00------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGG................................................22131.0031.004.006.00-1.00-1.002.00-1.00---1.00------1.00-1.00---1.00----1.00---------------1.00--1.00--------1.00--1.00---1.00------1.00-----------1.00---------1.00---------1.00---------1.00----------1.00------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGG.................................................21124.0024.003.002.001.00-4.001.002.00-----1.00--1.00------1.002.00-1.00-----1.00-----------------------------------------1.00----------------------------------1.00-------1.00----------------1.00----------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAG..................................................21121.0021.003.003.001.00-3.00-1.00-1.00-2.001.00---1.00--------1.00-------------------1.00-1.00----1.00-----------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGGT...............................................23119.0019.00--5.00----1.00---------2.003.00-----1.00--1.00------------------------1.003.00--------1.00--------------------------1.00------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGGG................................................23119.0019.00-2.001.003.00--1.002.001.00-1.00-1.00-2.00---------------1.00----1.001.00---------------------------------------------------------------------------1.00--------------------------------------------------1.00----
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGTTT.............................................22115.0015.00---------------------1.00----1.00------2.003.00--------1.00-1.00--------------------------------------------------------1.00-----------------------1.00---------1.001.00-------------1.00-------------1.00--
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAG..................................................20114.0014.00--3.00-2.00--1.00---1.00------2.00---1.00---------2.00-------------------------1.00-1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TCACCCTGACCTACAAGTCGGA....22112.0012.004.00-------------------------1.00-1.00------------1.00------1.00--1.00-------1.00----1.00---------------------------------------------------------------------------------------------1.00---------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGGA...............................................23111.0031.00--1.00-1.00---1.00------1.00---2.00-----1.00-----------------------------------------------1.00-1.00-----------------------------1.00---1.00----------------------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGAC................21110.0010.00-1.00--1.00----------------1.00----------------------------2.00-----------------1.001.00--------------------------1.00------------------------------------------1.00--------------1.00-------------
................................................................................................................................................................................................................................TCACCCTGACCTACAAGTCGG.....2119.009.00-------1.001.00---1.00--------------------------1.00-------------------------------------1.00-------------------------------------------1.00-------1.00---------------1.001.00---------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGGAT..............................................2419.0031.007.00----------1.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CACCCTGACCTACAAGTCGGA....2118.008.003.00---------------------------1.00--------------------------1.001.00---1.00-------------------------------------------------1.00---------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGGA................................................2318.0057.00----1.00-----1.00-------------1.00-----1.002.001.00------------------------------------------------------------------------------------1.00--------------------------------------------------
.........................................................................................ACTCAGCTTGAAGGGATCTGTT...........................................................................................................................................2218.008.00---2.00-1.00----------------------------1.00----------------------1.00-----------------------------------------------------1.00-------------------------------1.00---------1.00--------------
......................................................................................................................................................................................TTCTGCTTTGTTGGTCAGG.................................................1917.007.003.001.00----1.00-----------------------1.00--------------------------------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTTCTGCTTTGTTGGTCAGGG................................................2115.005.00-1.00---1.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------1.00---
..........................................................................................................................................................GTTTAGGATTTGGAGTTAACATCGTAATTTCTGCTTTGTTGGTCAGGGTTTACA..........................................5415.005.00---------5.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGA.................................................2215.0021.00-----------1.00---------2.00-1.00----------------------------------------------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGGGT...............................................2414.004.00-1.00---------------1.00----1.00---------------------------------------------1.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGTT..............................................2114.004.00---------------------------------1.00--1.00--------1.00--------------------------1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GTTTACAGCATTAATGGACAGGTTCACCC....................2914.004.00--------------4.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......CCTTTGGATTCCCAGTGGCAGC.............................................................................................................................................................................................................................2214.004.00-------------------1.00------------------------2.00--------------------------------------------------------------------------------------1.00------------------------------------
................................................................................................................................................................................................................................TCACCCTGACCTACAAGTCGGAA...2314.004.00-----------------------------------------------1.00-----------------------1.00--------------------------1.00--------------------------------------------------1.00------------------
.........................................................................................................................................................AGTTTAGGATTTGGAGT................................................................................1723.503.50----------------3.50-------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTTCTGCTTTGTTGGTCAGGGTT..............................................2313.003.00------1.00------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TAATGGACAGGTTCACCCTGACCTACAAGTCGGATT..363.000.003.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................AAAGGAATTACTCAGCTTGAA.....................................................................................................................................................2113.003.00--------------------------------------3.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GACAGGTTCACCCTGACCTACAAGTCGGA....2913.003.00--3.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................TGACCTACAAGTCGGAACGTGT223.000.00---------------------------------------1.00-------------------------------------------------------------------1.00------------------------------------------------1.00-----------
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGG................................................1913.003.00--------------------------------------------------1.00-------------------------------------------------------------------1.00-----1.00-------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGA................................................2213.0024.003.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CACCCTGACCTACAAGTCGGAACG.2413.003.00--------------------------------------------------------------------------2.00---1.00-----------------------------------------------------------------------------------------
............................................................................................CAGCTTGAAGGGATCCAAA...........................................................................................................................................193.000.00--------------------3.00---------------------------------------------------------------------------------------------------------------------------------------------------
.......CCTTTGGATTCCCAGTGGCAG..............................................................................................................................................................................................................................2113.003.00---1.00---1.00-------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTCTGCTTTGTTGGTCAGGGTTT.............................................2313.003.00----------------------------------------------------------------1.00-----------------1.00-------------------------------------------------------------------------------1.00-----
...............................................................................................................................................................................................................................TTCACCCTGACCTACAAGTCGGA....2313.003.00-------1.00----------------------------------------------------------------------------------------------------------------1.00-------------------1.00---------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACCTACAAGTCGGT....333.000.00-------------2.00----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGA.................................................2113.0014.00----------------------------------------2.00-----------------------------------------------1.00-------------------------------------------------------------------------------
.......................................................................TTAATGGATAAAGGAATTA................................................................................................................................................................1912.002.00-------------------------------------------------------------------2.00----------------------------------------------------------------------------------------------------
..................................................................................................................TTTACACTGGCCTGAAGC......................................................................................................................182.000.00----------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................ACTGGCCTGATGTGTGGGG................................................................................................................1912.002.00--2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGGGTT..............................................2512.002.00-------1.00--------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.................................................................ACCATGTTAATGGATAAAGG.....................................................................................................................................................................2012.002.00---2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTTCTGCTTTGTTGGTCAGG.................................................2012.002.00-2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTC....................................................1912.002.00----------------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------
.......CCTTTGGATTCCCAGTGGCAGCA............................................................................................................................................................................................................................2312.002.00----------1.00----------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACC...............2212.002.00-------------------------------------------------------------------------------------------------------------------1.00------------------1.00---------------------------------
...........................................................................................................................................................TTTAGGATTTGGAGTTAACATCGTAATTTCTGCTTTGTTGGTCAGGGTTTACAGCATTAATGGACAGGTTCACCCTGACCTACAAGTCGGAACGT9512.002.00---------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTCTGCTTTGTTGGTCAGGGTT..............................................2212.002.00-------------------------------------------------------------1.00--------------------------------------1.00-------------------------------------------------------------------
.................................................................................AAGGAATTACTCAGCTTGAAGGG..................................................................................................................................................2312.002.00---2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................AATTACTCAGCTTGAAGGG..................................................................................................................................................1912.002.00-------------------------------------------------------------------------------------1.00---------------------------------------------------------------------1.00------------
...............................................................................TAAAGGAATTACTCAGCTTGAAGGG..................................................................................................................................................2512.002.00--2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCA...................................................2012.002.00------1.00----------------------------------------------------------------------------------------------------------1.00------------------------------------------------------
.................................ACCAACCTGGCCCTTAGTAGT....................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
........................................................................................TACTCAGCTTGAAGGGATCTGTT...........................................................................................................................................2311.001.00------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGGTT..............................................2411.001.00-------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTGCTTTGTTGGTCAGGGTTT.............................................2111.001.00---------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTCTGCTTTGTTGGTCAGGG................................................2011.001.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CACCCTGACCTACAAGTCG......1911.001.00------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TCACCCTGACCTACAAGTCGGAAT..2411.004.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGA...............................................2011.003.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGT...............................................2011.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGCGT...............................................2411.0021.00----------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
.........................................................................................ACTCAGCTTGAAGGGATCTGT............................................................................................................................................2111.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTCTGCTTTGTTGGTCAGGGT...............................................2111.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................CTCAGCTTGAAGGGATCTGTT...........................................................................................................................................2111.001.00-------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................TACAAGTCGGAACGTGAAA191.000.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CACCCTGACCTACAAGTCGGTA...2211.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
...........................................................................................................TGTTTCCTTTACACTGGC.............................................................................................................................1811.001.00------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGGAA...............................................2411.0057.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................TAGGATTTGGAGTTAACATCG........................................................................2111.001.00------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
....................................................................................................................................................CAAAAAGTTTAGGATTTGGAGTT...............................................................................2311.001.00----------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
..............................................................TACACCATGTTAATGGATAAAGG.....................................................................................................................................................................2311.001.00--------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CTTTGTTGGTCAGGGTTTACAGCA.......................................2411.001.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGGTTTAT...........................................271.000.00-----------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGTTA.............................................2211.004.00---------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------
......TCCTTTGGATTCCCAGTGGCAGCA............................................................................................................................................................................................................................2411.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................AGGATTTGGAGTTAACATCG........................................................................2011.001.00------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................TGTTTCCTTTACACTGGCCTGA.........................................................................................................................2211.001.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................ATTTGGAGTTAACATCGTAATTTCTGCTTTGTTGGTCAG..................................................3911.001.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGGT................................................2311.0057.00------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACCTACAAGTCGGA....3311.001.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................ACCCTGACCTACAAGTCGGA....2011.001.00------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TTAATGGACAGGTTCACCCTGACT...............241.000.00-------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCA...................................................1911.001.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGGGAA..............................................2511.0019.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................AGGAATTACTCAGCTTGAAGGGATCTGTTT..........................................................................................................................................3011.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CCTGATGTGTGGGGAGAAAGG.........................................................................................................2111.001.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AAAGGGGCCAAAAAGTTTAGGT........................................................................................221.000.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTCACCCTGACCTACAAGTCGG.....2211.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................AATGGATAAAGGAATTACTCAGCTTGAAGGGTTT...............................................................................................................................................341.000.00-------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................ATAAAGGAATTACTCAGCTTGAAGGGATCC..............................................................................................................................................301.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGCTT.............................................2211.003.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TAATGGACAGGTTCACCCTGA.................2111.001.00--------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................................................................................................GACCTACAAGTCGGAACG.1811.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACCTACAAGTAGGT....331.000.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................GCCTGATGTGTGGGGAGAAAGGGG.......................................................................................................2411.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................TTTGTTGGTCAGGGTTTACAG.........................................2111.001.00---------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTG..................1911.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGC................................................2211.0024.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................CAGCTTGAAGGGATCTGTT...........................................................................................................................................1911.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................TTTACAGCATTAATGGACAGGTTCA.......................2511.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CACCCTGACCTACAAGTCGGAA...2211.001.00------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
................................AACCAACCTGGCCCTTAGTAG.....................................................................................................................................................................................................2111.001.00----------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
.......CCTTTGGATTCCCAGTGGCAGCT............................................................................................................................................................................................................................2311.004.00----------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
...............................................................................................................................................................................................................................TTCACCCTGACCTACAAGTCGGAAC..2511.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACCTACA...........2611.001.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TAATTTCTGCTTTGTTGGTCAG..................................................2211.001.00-----------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACCTACAAGTCGGCAT..351.000.00-----------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGCTTTGTTGGTCAGGGTT..............................................1911.001.00----------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGTCAGT.................................................2211.0021.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGCTTTGTTGGTCAGGGTTTA............................................2111.001.00---------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CACCCTGACCTACAAGTCGG.....2011.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
........................................................................................................................................................AAGTTTAGGATTTGGAGTTA..............................................................................2011.001.00-----------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGGAA..............................................2411.0031.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TCACCCTGACCTACAAGTCGGT....2211.009.00-------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.........................................................................................................................................................................................TGCTTTGTTGGTCAGGGTTTACAG.........................................2411.001.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGTAT.............................................2211.001.00-------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
.......CCTTTGGATTCCCAGTGGCAGCAT...........................................................................................................................................................................................................................2411.002.00------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGTTTT............................................2311.0015.00---------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACA...............2211.0010.00---------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
...................................................................................................................................................................................AATTTCTGCTTTGTTGGAAA...................................................201.000.00----------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACCTAC............2511.001.00-------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
.................CCCAGTGGCAGCAGCAACCAACC..................................................................................................................................................................................................................2311.001.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TTGTTGGTCAGGGTTTATGT.........................................201.000.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCTGCTTTGTTGGTCAGGGTTTAGA..........................................251.000.00-------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TAATTTCTGCTTTGTTGGTCAGGT................................................241.000.00--------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................................................TGCTTTGTTGGTCAGGGTTTACA..........................................2311.001.00--------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................ACTCAGCTTGAAGGGATCTGTTT..........................................................................................................................................2311.001.00------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................ATTAATGGACAGGTTCACCCTGACCTACAAGTCGG.....3511.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------
.........................................................................AATGGATAAAGGAATTACTCAGCTTG.......................................................................................................................................................2611.001.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACCTACAAGTCGGAT...3411.001.00------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..........................................................................................CTCAGCTTGAAGGGATCTGTTT..........................................................................................................................................2211.001.00-------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................ATTTCTGCTTTGTTGGTCAGGGTA..............................................2411.0019.00-------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
................................................................................AAAGGAATTACTCAGCTTGAAGGT..................................................................................................................................................241.000.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
........................................................................................................ATCTGTTTCCTTTACCTA................................................................................................................................181.000.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
........................................TGGCCCTTAGTAGTTTCTA...............................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
.............................................................................................AGCTTGAAGGGATCTTTA...........................................................................................................................................181.000.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTTCTGCTTTGTTGGTCAGGTT...............................................2211.002.00------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGACCTACAAGTCGGAA...3411.001.00-------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
.........TTTGGATTCCCAGTGGCAGCAGC..........................................................................................................................................................................................................................2311.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
......TCCTTTGGATTCCCAGTGGCAT..............................................................................................................................................................................................................................221.000.00-----------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------
.....................................................................................................................................................................................................................AATGGACAGGTTCACCCTGA.................2011.001.00----------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTGCTTTGTTGGTCAGGGTTTA............................................2211.001.00--------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
............................................................................................................................................................................................TTTGTTGGTCAGGGT...............................................1540.500.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TTTAGGATTTGGAGTTA..............................................................................1720.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------------0.50
...................................................................................................................................................................................AATTTCTGCTTTGTTGGT.....................................................1850.200.20-----------------------------------------------------------------------------------0.20------------------------------------------------------------------------------------

Antisense strand
GGGTGGTCCTTTGGATTCCCAGTGGCAGCAGCAACCAACCTGGCCCTTAGTAGTTTCTAAGTTACACCATGTTAATGGATAAAGGAATTACTCAGCTTGAAGGGATCTGTTTCCTTTACACTGGCCTGATGTGTGGGGAGAAAGGGGCCAAAAAGTTTAGGATTTGGAGTTAACATCGTAATTTCTGCTTTGTTGGTCAGGGTTTACAGCATTAATGGACAGGTTCACCCTGACCTACAAGTCGGAACGT
....................................................................................(((((.((.(((((....((.(((.((((((((((((.........)))))))).)))).)))))...))))).))))))).((.((((((..(((.....)))..))))))))....................................................
....................................................................................85.................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189782SRR037938(GSM510476)
293Red. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
GSM359193(GSM359193)
HepG2_3pM_7. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR038858(GSM458541)
MEL202. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038859(GSM458542)
MM386. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR029129(GSM416758)
SW480. (cell line)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
GSM416733(GSM416733)
HEK293. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR037931(GSM510469)
293GFP. (cell line)
SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM359204(GSM359204)
HepG2_nucl_low. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191534(GSM715644)
153genomic small RNA (size selected RNA from . (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR038862(GSM458545)
MM472. (cell line)
SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
.........................................................................................................................................................................................................................GACAGGTTCACCCTGATCTT............. 202.000.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
........................................................................................................ATCTGTTTCCTTTACGTGC............................................................................................................................... 191.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
....................AGTGGCAGCAGCAACTG..................................................................................................................................................................................................................... 171.000.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GGACAGGTTCACCCTGACTTT............. 211.000.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------