ID: uc003oog.1_intron_11_0_chr6_38950239_f.5p
GENE: DNAH8(12)
chr6:38950189-38950438+


(3)
B-CELL 		(3)
BRAIN 		(10)
BREAST 		(8)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(2)
LIVER 		(4)
OTHER 		(2)
RRP40.ip 		(5)
SKIN 		(4)
UTERUS

Sense strand
CCAGTGTTCAGTTTATTCAGAATCACCTTGATGAATGCGATATTAAGAAAGTGAGTGAAATTATGCCTTTTTTCCTGTTTTTATTGCTCTTCTTAAATCAGGGTTCTACAGTCATTTGAAGTCTATGATAAGGTGTGAATTTGCTGAGCCCCATGGAGCCCCCTTTGAAGGGACTTGTTGCTGTAATCAGGCACTTGCTGGGGCAGCCTGTCCCTGCCCCCAACACTCACATACCTCTGAAGCTAACTAA
....................................................................................................((((((..((.((((.....(((...))).....))))...))..))))))...................................................................................................
.............................................................................................94..........................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR189784SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR189787SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................CAGGGTTCTACAGTCCGAC.....................................................................................................................................1919.000.007.002.002.00---1.00-1.001.00-2.00-----------------1.00--------1.00----1.00--
.................................................................................................TCAGGGTTCTACAGTCCGAC.....................................................................................................................................20111.001.002.002.00---2.00--1.001.00-----------------1.001.00-----------1.00-----
..................................................................................................CAGGGTTCTACAGTCCGA......................................................................................................................................1811.000.005.00-1.00---2.00-------------1.00-----1.00----------1.00--------
..................................................................................................CAGGGTTCTACAGTCCG.......................................................................................................................................1711.000.00-1.004.002.00------------1.00-----1.00-------1.00--------1.00------
..................................................................................................CAGGGTTCTACAGTCGATC.....................................................................................................................................196.000.006.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCGACG.....................................................................................................................................195.000.001.003.00---1.00----------------------------------------
..................................................................................................CAGGGTTCTACAGTCCTA......................................................................................................................................184.000.00----4.00-----------------------------------------
..................................................................................................CAGGGTTCTACAGTCACGAC....................................................................................................................................203.000.003.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCGGAC.....................................................................................................................................193.000.003.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCGAC......................................................................................................................................182.000.001.001.00--------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCGAC......................................................................................................................................1912.001.001.00----1.00----------------------------------------
.................................................................................................TCAGGGTTCTACAGTCATGATC...................................................................................................................................222.000.002.00---------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCC........................................................................................................................................1712.001.00------2.00---------------------------------------
..................................................................................................CAGGGTTCTACAGTCCAC......................................................................................................................................182.000.001.00----1.00----------------------------------------
.................................................................................................TCAGGGTTCTACAGTCCC.......................................................................................................................................1812.001.001.00-----------------------1.00---------------------
.................................................................................................TCAGGGTTCTACAGTCCGA......................................................................................................................................1912.001.001.00------1.00--------------------------------------
.................................................................................................TCAGGGTTCTACAGTCACGAT....................................................................................................................................212.000.002.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCGCA.....................................................................................................................................191.000.00--------------------------------1.00-------------
..................................................................................................CAGGGTTCTACAGTCACGA.....................................................................................................................................191.000.00---------1.00------------------------------------
.................................................................................................TCAGGGTTCTACAGTCATGTTT...................................................................................................................................221.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCGAA.....................................................................................................................................191.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCGA.......................................................................................................................................171.000.00------------------------------------1.00---------
.................................................................................................TCAGGGTTCTACAGTCGACG.....................................................................................................................................2011.001.001.00---------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCATAGCG...................................................................................................................................221.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCGAT.....................................................................................................................................191.000.00---1.00------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCCGCG.....................................................................................................................................2011.001.00----------------------------------1.00-----------
..................................................................................................CAGGGTTCTACAGTCCCGA.....................................................................................................................................191.000.001.00---------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCCGGC.....................................................................................................................................2011.001.001.00---------------------------------------------
...................................................................................................AGGGTTCTACAGTCACGAC....................................................................................................................................191.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCGGA......................................................................................................................................181.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCATGGTT...................................................................................................................................211.000.001.00---------------------------------------------
......................................................................................................GTTCTACAGTCATTTTT...................................................................................................................................171.000.00---1.00------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCCGCC.....................................................................................................................................2011.001.00---------------------1.00------------------------
..................................................................................................CAGGGTTCTACAGTCCAT......................................................................................................................................181.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCC.......................................................................................................................................171.000.00-----------------------------------1.00----------
.................................................................................................TCAGGGTTCTACAGTCCGAT.....................................................................................................................................2011.001.00-------------------1.00--------------------------
................................................................................................ATCAGGGTTCTACAGTCCG.......................................................................................................................................191.000.00---1.00------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCATAGGA...................................................................................................................................221.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCGT......................................................................................................................................181.000.001.00---------------------------------------------
...................................................................................................AGGGTTCTACAGTCAGATC....................................................................................................................................191.000.00--------------------------------------------1.00-
..................................................................................................CAGGGTTCTACAGTCGATA.....................................................................................................................................191.000.001.00---------------------------------------------
.............................................................................................TAAATCAGGGTTCTACAGTCCG.......................................................................................................................................221.000.00--1.00-------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCCG.......................................................................................................................................1811.001.00---------------1.00------------------------------
.................................................................................................TCAGGGTTCTACAGTCATC......................................................................................................................................191.000.00---1.00------------------------------------------
..................................................................................................CAGGGTTCTACAGTCTGAT.....................................................................................................................................191.000.00------------------------------------------1.00---
....................................................................................................................................GTGTGAATTTGCTGAACA....................................................................................................181.000.00-----------------------------------------1.00----
.................................................................................................TCAGGGTTCTACAGTCGATC.....................................................................................................................................2011.001.00------------1.00---------------------------------
.................................................................................................TCAGGGTTCTACAGTCCTAC.....................................................................................................................................2011.001.001.00---------------------------------------------
...................................................................................................AGGGTTCTACAGTCAGAA.....................................................................................................................................181.000.00----1.00-----------------------------------------
.................................................................................................TCAGGGTTCTACAGTCGCGA.....................................................................................................................................2011.001.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCATG.....................................................................................................................................191.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCCT......................................................................................................................................181.000.00---------------1.00------------------------------
.................................................................................................TCAGGGTTCTACAGTCCGAG.....................................................................................................................................2011.001.00-1.00--------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCACG.....................................................................................................................................191.000.00--------1.00-------------------------------------
......................................................................................................................................GTGAATTTGCTGAGCTAAA.................................................................................................191.000.00------------------1.00---------------------------
.................................................................................................TCAGGGTTCTACAGTCCACG.....................................................................................................................................2011.001.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCGTC......................................................................................................................................181.000.001.00---------------------------------------------
.................................................................................................TCAGGGTTCTACAGTCATACGA...................................................................................................................................221.000.001.00---------------------------------------------
.................................................................................................TCAGGGTTCTACAGTC.........................................................................................................................................1611.001.00-----------------1.00----------------------------
..................................................................................................CAGGGTTCTACAGTCCGAG.....................................................................................................................................191.000.00-1.00--------------------------------------------
..................................................................................................CAGGGTTCTACAGTCATTATC...................................................................................................................................211.000.001.00---------------------------------------------
..................................................................................................CAGGGTTCTACAGTCCGC......................................................................................................................................181.000.001.00---------------------------------------------
.................................................................................................TCAGGGTTCTACAGT..........................................................................................................................................1560.170.17----------0.17-----------------------------------

Antisense strand
CCAGTGTTCAGTTTATTCAGAATCACCTTGATGAATGCGATATTAAGAAAGTGAGTGAAATTATGCCTTTTTTCCTGTTTTTATTGCTCTTCTTAAATCAGGGTTCTACAGTCATTTGAAGTCTATGATAAGGTGTGAATTTGCTGAGCCCCATGGAGCCCCCTTTGAAGGGACTTGTTGCTGTAATCAGGCACTTGCTGGGGCAGCCTGTCCCTGCCCCCAACACTCACATACCTCTGAAGCTAACTAA
....................................................................................................((((((..((.((((.....(((...))).....))))...))..))))))...................................................................................................
.............................................................................................94..........................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR189784SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR189787SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
.....GTTCAGTTTATTCAGTCTG.................................................................................................................................................................................................................................. 196.000.00-------3.00-----1.001.00------------------1.00------------
............................................AAGAAAGTGAGTGAATTG............................................................................................................................................................................................ 182.000.00----------2.00-----------------------------------
................................................................................TTATTGCTCTTCTTAGTAT....................................................................................................................................................... 191.000.00-----------------------1.00----------------------
.................................................................................................................................................................................................................GTCCCTGCCCCCAACTCTG...................... 191.000.00--------------1.00-------------------------------
.........................................ATTAAGAAAGTGAGTGAAATG............................................................................................................................................................................................ 211.000.00-------------------------1.00--------------------
................TCAGAATCACCTTGATTTT....................................................................................................................................................................................................................... 191.000.00-------------------------------1.00--------------
.....GTTCAGTTTATTCAGAATCTG................................................................................................................................................................................................................................ 211.000.00-------------1.00--------------------------------
...................................................................................................................................................................................................................CCCTGCCCCCAACACTCTC.................... 191.000.00------------1.00---------------------------------
.............................................................................................................................................................................................................GTTGGGGGCAGGGACAGGC.......................... 1920.500.50---------------------------------------------0.50