ID: uc003onc.1_intron_9_0_chr6_36946388_r.5p
GENE: MTCH1(2)
chr6:36949164-36949413-


(2)
B-CELL 		(2)
BREAST 		(4)
CELL-LINE 		(2)
CERVIX 		(6)
HEART 		(14)
LIVER 		(3)
OTHER 		(8)
SKIN 		(1)
XRN.ip

Sense strand
CAATGTGCTGGGGAGGAAGGTCCTCTATCTGCCGAGCTTCTTCACCTACGGTGAGTGTGCCTCCCAAGCAGGAAAGCCCACACCAACAGAAAAGAGGCCTCAGGTGGGGAGCAGGACCAGCTGGCCCCGGGGAACTCACTGCGCAGCATGGCACGCAGTCGAGCTGGCATGGAGGAGGGGATCTAAGCGTGTACAGAGAGGACATGGTGTCGGGGTGCGAGCAGGTGAACCATACAGCTTTGGTCCAGCT
..................................................................................((.............((((....((((..(((......))).))))))))..(((..(((.((((.((((.....)))).)))))))..)))..))........................................................................
...............................................................................80.................................................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189782SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040008(GSM532893)
G727N. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
....................................................................................AACAGAAAAGAGGCCTCAGGATG...............................................................................................................................................23182.004.0010.0015.0012.004.0010.0010.009.00-2.003.001.002.00-2.002.00-----------------------------
.....................................................................................ACAGAAAAGAGGCCTCAGGATG...............................................................................................................................................22123.002.007.00-3.006.003.002.00--1.00--1.00--------------------------------
.....................................................................................ACAGAAAAGAGGCCTCAGGATGC..............................................................................................................................................23118.002.0011.00--3.00-4.00--------------------------------------
....................................................................................AACAGAAAAGAGGCCTCAGGATGC..............................................................................................................................................24115.004.009.001.00-3.00----1.00-1.00---------------------------------
......................................................................................CAGAAAAGAGGCCTCAGGATG...............................................................................................................................................21211.503.507.000.502.500.50-0.50-0.50------------------------------------
....................................................................................AACAGAAAAGAGGCCTCAGGATGT..............................................................................................................................................24111.004.00-6.001.00-2.001.00----1.00---------------------------------
....................................................................................AACAGAAAAGAGGCCTCAGGA.................................................................................................................................................2117.004.002.00-1.002.00-1.00-------1.00------------------------------
....................................................................................AACAGAAAAGAGGCCTCAGGATA...............................................................................................................................................2317.004.00-2.00--2.00----2.001.00---------------------------------
......................................................................................CAGAAAAGAGGCCTCAGGATGC..............................................................................................................................................2226.503.503.001.000.502.00----------------------------------------
.....................................................................................ACAGAAAAGAGGCCTCAGGAT................................................................................................................................................2115.002.002.00-1.00----2.00------------------------------------
....................................................................................AACAGAAAAGAGGCCTCAGG..................................................................................................................................................2014.004.002.00--1.00----1.00-----------------------------------
....................................................................................AACAGAAAAGAGGCCTCAGGATT...............................................................................................................................................2314.004.00--2.00-----1.001.00----------------------------------
.....................................................................................ACAGAAAAGAGGCCTCAGGA.................................................................................................................................................2014.002.00-3.00-1.00----------------------------------------
......................................................................................CAGAAAAGAGGCCTCAGG..................................................................................................................................................1823.503.501.00-0.50---1.001.00------------------------------------
....................................................................................AACAGAAAAGAGGCCTCAGGAT................................................................................................................................................2213.004.00-2.00-1.00----------------------------------------
......................................................................................CAGAAAAGAGGCCTCAGGAT................................................................................................................................................2022.503.500.50------2.00------------------------------------
......................................................................................CAGAAAAGAGGCCTCAGGA.................................................................................................................................................1922.503.50-1.00-0.50---0.50------------------------------0.50-----
....................................................................................AACAGAAAAGAGGCCTCAGGATC...............................................................................................................................................2312.004.00-2.00------------------------------------------
....................TCCTCTATCTGCCGAGCTTCTTCACCT...........................................................................................................................................................................................................2712.002.00------------2.00-------------------------------
.AATGTGCTGGGGAGGAAGGT.....................................................................................................................................................................................................................................2012.002.001.00-----------------------------1.00-------------
............................CTGCCGAGCTTCTTCACCTACG........................................................................................................................................................................................................2212.002.00------------------1.00---------------1.00---------
...........................................................................................................................................................CAGTCGAGCTGGCATGGAGG...........................................................................2012.002.00-------------------2.00------------------------
.....................................................................................ACAGAAAAGAGGCCTCAGG..................................................................................................................................................1912.002.001.00-1.00-----------------------------------------
......................................................................................CAGAAAAGAGGCCTCAGGATA...............................................................................................................................................2121.503.50---0.50---0.50---0.50--------------------------------
.........GGGGAGGAAGGTCCTCTATCTGCCGAG......................................................................................................................................................................................................................2711.001.00----------------1.00---------------------------
..............................................................................................................GCAGGACCAGCTGGCGCT..........................................................................................................................181.000.00---------------------------------1.00----------
..........................................................................................................................GGCCCCGGGGAACTCACTGCGCAGC.......................................................................................................2511.001.00---------------------------1.00----------------
....................TCCTCTATCTGCCGAGCT....................................................................................................................................................................................................................1811.001.00------------------------1.00-------------------
.........................TATCTGCCGAGCTTCTTCAC.............................................................................................................................................................................................................2011.001.00----------------------1.00---------------------
.................AGGTCCTCTATCTGCCGAGCTTCTTCAC.............................................................................................................................................................................................................2811.001.00--------------------------1.00-----------------
..............................................................................................................................................................TCGAGCTGGCATGGAGGAGGGGACC...................................................................251.000.00-----------------1.00--------------------------
..ATGTGCTGGGGAGGAAGGT.....................................................................................................................................................................................................................................1921.001.001.00-------------------------------------------
.....................................................................................ACAGAAAAGAGGCCTCAGGATA...............................................................................................................................................2211.002.001.00-------------------------------------------
..............................................................................................................................................................................................GTACAGAGAGGACATGGTG.........................................1911.001.00-------------------------1.00------------------
....................................................................................AACAGAAAAGAGGCCTCAGGTTT...............................................................................................................................................231.000.00----1.00---------------------------------------
..........................................................................................................................GGCCCCGGGGAACTCTG...............................................................................................................171.000.00-----------------------1.00--------------------
.......................................................................................................................................................CACGCAGTCGAGCTGGCATGGAGGAGGG.......................................................................2811.001.00----------------1.00---------------------------
..............................GCCGAGCTTCTTCACCTACGCC......................................................................................................................................................................................................221.000.00--------------------1.00-----------------------
........................CTATCTGCCGAGCTTCTTCACCTACG........................................................................................................................................................................................................2611.001.00------------1.00-------------------------------
.......................................................................................................................................................................................................................TGCGAGCAGGTGAACCTTA................191.000.00---------------1.00----------------------------
.........................................................................................................................................................................................................ACATGGTGTCGGGGTGCGAGCAGGCA.......................261.000.00--------------------------------1.00-----------
......................................................................................................................AGCTGGCCCCGGGGAACTCACTGCGCAGCACGG...................................................................................................331.000.00-----------------1.00--------------------------
....................................................................................AACAGAAAAGAGGCCTCAGGAAA...............................................................................................................................................2311.004.00----1.00---------------------------------------
............................................................................................AGAGGCCTCAGGTGGGAT............................................................................................................................................181.000.00-------------------------------1.00------------
..................................................................................CCAACAGAAAAGAGGC........................................................................................................................................................1650.600.60---------------------0.20--------------0.20------0.20
...TGTGCTGGGGAGGAAGGTC....................................................................................................................................................................................................................................1920.500.50--0.50-----------------------------------------
.......CTGGGGAGGAAGGTCCTCTATCTG...........................................................................................................................................................................................................................2420.500.50------------------------------------0.50-------
..ATGTGCTGGGGAGGAAGGTC....................................................................................................................................................................................................................................2020.500.50---------------------------------------0.50----
.......CTGGGGAGGAAGGTCCTCTATC.............................................................................................................................................................................................................................2220.500.50--------------------0.50-----------------------
........TGGGGAGGAAGGTCCTCT................................................................................................................................................................................................................................1820.500.50-----------------------------------------0.50--
............GAGGAAGGTCCTCTATCT............................................................................................................................................................................................................................1820.500.50-------------------------------------0.50------
..ATGTGCTGGGGAGGAAGGTT....................................................................................................................................................................................................................................2020.501.00----------------------------------------0.50---
......................................................................................CAGAAAAGAGGCCTCAGGATGA..............................................................................................................................................2220.503.50--------0.50-----------------------------------

Antisense strand
CAATGTGCTGGGGAGGAAGGTCCTCTATCTGCCGAGCTTCTTCACCTACGGTGAGTGTGCCTCCCAAGCAGGAAAGCCCACACCAACAGAAAAGAGGCCTCAGGTGGGGAGCAGGACCAGCTGGCCCCGGGGAACTCACTGCGCAGCATGGCACGCAGTCGAGCTGGCATGGAGGAGGGGATCTAAGCGTGTACAGAGAGGACATGGTGTCGGGGTGCGAGCAGGTGAACCATACAGCTTTGGTCCAGCT
..................................................................................((.............((((....((((..(((......))).))))))))..(((..(((.((((.((((.....)))).)))))))..)))..))........................................................................
...............................................................................80.................................................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189782SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040008(GSM532893)
G727N. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
.......................................................................................................................................................CACGCAGTCGAGCTGAAGT................................................................................ 191.000.00------------------1.00-------------------------
..........................................................................................................................................................................CTCTGTACACGCTTAGATCCCCTCCTCC.................................................... 2811.001.00-----------------------------1.00--------------
.........................................................................................................................TGGCCCCGGGGAACTCTTC.............................................................................................................. 191.000.00---------------1.00----------------------------
................................................................................CACCAACAGAAAAGAGGAG....................................................................................................................................................... 191.000.00----------------------------1.00---------------
......................................................................................CAGAAAAGAGGCCTCACC.................................................................................................................................................. 181.000.00---------------------1.00----------------------
...............................................................................................................................................................CTCCATGCCAGCTCG............................................................................ 1550.200.20------------------------------------------0.20-