ID: uc003oms.1_intron_0_0_chr6_36730770_r.3p
GENE: CPNE5(12)
chr6:36730720-36730969-


(2)
CELL-LINE 		(2)
CERVIX 		(12)
LIVER 		(2)
OTHER 		(2)
SKIN

Sense strand
CTGGGTGACAATTGGGTTTCTTCCTCTGTGGGCAACACTGGGCTCTCTTCCCACGGACCCAGCCTGTCTGCTGGCGTGTGCCCCTGGAGTGGAGTCCCAGGTAGAATTGGGAGCCAAAGAAACGGATGTGTGCAAGGCTGGGGCTGGGCAGAGGCAGGGCACAGCCTGGCCTTGGTCTCAGCAGCCGTCTTCCCTTGCAGCCATGACTTCATTGGGGAGTTCACCACCAGTTACCGGGAGCTGGCCCGTG
..................................................................((((((.((.((.(((((.....(((..((((((......)))))).)))..........((....)).....))))))).))...))))))............................................................................................
..................................................................67...............................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189784SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040008(GSM532893)
G727N. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040025(GSM532910)
G613T. (cervix)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................TGGCGTGTGCCCCTGGTGTT...............................................................................................................................................................204984.000.001463.001289.001169.001056.002.00-2.00--1.00----1.00-1.00---
.......................................................................TGGCGTGTGCCCCTGGTGT................................................................................................................................................................191930.000.00569.00458.00464.00439.00----------------
.......................................................................TGGCGTGTGCCCCTGGTG.................................................................................................................................................................18265.000.00101.0059.0050.0055.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGTA...............................................................................................................................................................20181.000.0012.0045.0057.0067.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGTC...............................................................................................................................................................2083.000.008.0028.0015.0032.00----------------
.......................................................................TGGCGTGTGCCCCTGGTTTG...............................................................................................................................................................2073.000.0026.0019.009.0019.00----------------
.......................................................................TGGCGTGTGCCCCTGGTTT................................................................................................................................................................1933.000.005.009.008.0011.00----------------
.......................................................................TGGCGTGTGCCCCTGGTTTT...............................................................................................................................................................2025.000.007.008.005.005.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGA................................................................................................................................................................1923.000.003.007.005.008.00----------------
.......................................................................TGGCGTGTGCCCCTGTTGT................................................................................................................................................................1922.000.006.002.008.006.00----------------
.......................................................................TGGCGTGTGCCCCTGGTAA................................................................................................................................................................1917.000.001.006.005.005.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGC................................................................................................................................................................1914.000.001.003.008.002.00----------------
.......................................................................TGGCGTGTGCCCCTGGTCC................................................................................................................................................................1911.000.00--6.005.00----------------
.......................................................................TGGCGTGTGCCCCTGGTCT................................................................................................................................................................1911.000.00-4.004.003.00----------------
.......................................................................TGGCGTGTGCCCCTGGAGTTTG.............................................................................................................................................................2211.000.005.004.00-2.00----------------
.......................................................................TGGCGTGTGCCCCTGTTG.................................................................................................................................................................189.000.003.003.00-3.00----------------
........................................................................GGCGTGTGCCCCTGGTGTT...............................................................................................................................................................199.000.007.001.001.00-----------------
.......................................................................TGGCGTGTGCCCCTGGTCA................................................................................................................................................................199.000.001.003.003.002.00----------------
.......................................................................TGGCGTGTGCCCCTGGCGTT...............................................................................................................................................................207.000.00-2.002.003.00----------------
.......................................................................TGGCGTGTGCCCCTGGTT.................................................................................................................................................................187.000.00-4.001.002.00----------------
.......................................................................TGGCGTGTGCCCCTGGTC.................................................................................................................................................................186.000.001.002.003.00-----------------
.......................................................................TGGCGTGTGCCCCTGGTGTG...............................................................................................................................................................205.000.003.002.00------------------
.......................................................................TGGCGTGTGCCCCTGGTAAA...............................................................................................................................................................205.000.00-3.001.001.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGCT...............................................................................................................................................................205.000.00-2.001.002.00----------------
........................................................................GGCGTGTGCCCCTGGTGT................................................................................................................................................................185.000.00-3.001.001.00----------------
.......................................................................TGGCGTGTGCCCCTGGTAT................................................................................................................................................................195.000.002.002.00--1.00---------------
.......................................................................TGGCGTGTGCCCCTGGTA.................................................................................................................................................................184.000.00-2.001.001.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGG................................................................................................................................................................194.000.00-1.002.001.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGAT...............................................................................................................................................................203.000.002.00-1.00-----------------
.......................................................................TGGCGTGTGCCCCTGGGG.................................................................................................................................................................183.000.001.001.00-1.00----------------
.......................................................................TGGCGTGTGCCCCTGGAGTT...............................................................................................................................................................203.000.00-2.00---------1.00--------
.......................................................................TGGCGTGTGCCCCTGGTATA...............................................................................................................................................................203.000.001.001.001.00-----------------
.......................................................................TGGCGTGTGCCCCTGGTGAA...............................................................................................................................................................203.000.00--2.001.00----------------
.......................................................................TGGCGTGTGCCCCTGGTTG................................................................................................................................................................193.000.001.00-1.001.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGAC...............................................................................................................................................................203.000.00--1.002.00----------------
.......................................................................TGGCGTGTGCCCCTGGGGTT...............................................................................................................................................................202.000.00-1.001.00-----------------
.......................................................................TGGCGTGTGCCCCTGTGTT................................................................................................................................................................192.000.00-2.00------------------
.......................................................................TGGCGTGTGCCCCTGGTCAA...............................................................................................................................................................202.000.00--1.001.00----------------
.......................................................................TGGCGTGTGCCCCTGGTACA...............................................................................................................................................................202.000.00---2.00----------------
.......................................................................TGGCGTGTGCCCCTGGTCTC...............................................................................................................................................................202.000.001.00-1.00-----------------
...................CTTCCTCTGTGGGCATTTA....................................................................................................................................................................................................................192.000.00-----2.00--------------
.......................................................................TGGCGTGTGCCCCTGGTCCA...............................................................................................................................................................202.000.00--2.00-----------------
.......................................................................TGGCGTGTGCCCCTGTTTT................................................................................................................................................................192.000.001.001.00------------------
.......................................................................TGGCGTGTGCCCCTGTTGA................................................................................................................................................................191.000.00-1.00------------------
.......................................................................TGGCGTGTGCCCCTGGTATT...............................................................................................................................................................201.000.00--1.00-----------------
.......................................................................TGGCGTGTGCCCCTGGAGTAAG.............................................................................................................................................................221.000.001.00-------------------
.......................................................................TGGCGTGTGCCCCTGGGC.................................................................................................................................................................181.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGGCACA...............................................................................................................................................................201.000.001.00-------------------
.......................................................................TGGCGTGTGCCCCTGGTTCG...............................................................................................................................................................201.000.001.00-------------------
...................................................................................................................................................................................................................................CAGTTACCGGGAGCTGCTA....191.000.00-------------1.00------
.......................................................................TGGCGTGTGCCCCTGGTTGT...............................................................................................................................................................201.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGGTCTG...............................................................................................................................................................201.000.00---1.00----------------
...........................................................................GTGTGCCCCTGGAGTGGC.............................................................................................................................................................181.000.00------------1.00-------
......................................................................CTGGCGTGTGCCCCTGGTG.................................................................................................................................................................191.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGGTGCA...............................................................................................................................................................201.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGGAAAAC..............................................................................................................................................................211.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGGAGTTTGA............................................................................................................................................................231.000.00-1.00------------------
.......................................................................TGGCGTGTGCCCCTGGAGTTTCC............................................................................................................................................................231.000.00--1.00-----------------
.......................................................................TGGCGTGTGCCCCTGGAGTTTAG............................................................................................................................................................231.000.00-1.00------------------
.......................................................................TGGCGTGTGCCCCTGGCGTA...............................................................................................................................................................201.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGTTGC................................................................................................................................................................191.000.00-1.00------------------
.......................................................................TGGCGTGTGCCCCTGGGTTT...............................................................................................................................................................201.000.00-1.00------------------
.......................................................................TGGCGTGTGCCCCTGGTAG................................................................................................................................................................191.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGGAGTTTGC............................................................................................................................................................231.000.001.00-------------------
.......................................................................TGGCGTGTGCCCCTGGTCTA...............................................................................................................................................................201.000.00--1.00-----------------
.......................................................................TGGCGTGTGCCCCTGGACAAA..............................................................................................................................................................211.000.00-1.00------------------
........................................................................GGCGTGTGCCCCTGGTTTG...............................................................................................................................................................191.000.001.00-------------------
.......................................................................TGGCGTGTGCCCCTGGTTTA...............................................................................................................................................................201.000.00--1.00-----------------
........................................................................GGCGTGTGCCCCTGGTTT................................................................................................................................................................181.000.00-1.00------------------
...................CTTCCTCTGTGGGCAACACTG..................................................................................................................................................................................................................2111.001.00----------1.00---------
.......................................................................TGGCGTGTGCCCCTGGCAA................................................................................................................................................................191.000.00-1.00------------------
.......................................................................TGGCGTGTGCCCCTGGTGGT...............................................................................................................................................................201.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGGGT.................................................................................................................................................................181.000.001.00-------------------
.......................................................................TGGCGTGTGCCCCTGGACAA...............................................................................................................................................................201.000.00---1.00----------------
.......................................................................TGGCGTGTGCCCCTGGCGT................................................................................................................................................................191.000.00-1.00------------------
.......................................................................TGGCGTGTGCCCCTGGTTA................................................................................................................................................................191.000.00--1.00-----------------
..............................................................................................................................................GCTGGGCAGAGGCAGGGC..........................................................................................1870.290.29------------------0.140.14
........................................................................................................................................GCTGGGGCTGGGCAGAGG................................................................................................1850.200.20-----------------0.20--

Antisense strand
CTGGGTGACAATTGGGTTTCTTCCTCTGTGGGCAACACTGGGCTCTCTTCCCACGGACCCAGCCTGTCTGCTGGCGTGTGCCCCTGGAGTGGAGTCCCAGGTAGAATTGGGAGCCAAAGAAACGGATGTGTGCAAGGCTGGGGCTGGGCAGAGGCAGGGCACAGCCTGGCCTTGGTCTCAGCAGCCGTCTTCCCTTGCAGCCATGACTTCATTGGGGAGTTCACCACCAGTTACCGGGAGCTGGCCCGTG
..................................................................((((((.((.((.(((((.....(((..((((((......)))))).)))..........((....)).....))))))).))...))))))............................................................................................
..................................................................67...............................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189784SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040008(GSM532893)
G727N. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040025(GSM532910)
G613T. (cervix)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................................................................................................................CAGTTACCGGGAGCTAT...... 171.000.00-------1.00------------
.....................................................................................................................................................................................CAGCCGTCTTCCCTTTTCG.................................................. 191.000.00--------1.00-----------
........................................................ACCCAGCCTGTCTGCTTTT............................................................................................................................................................................... 191.000.00---------------1.00----
.......................................................................................................................................................................................GCCGTCTTCCCTTGCAA.................................................. 171.000.00-------1.00------------