ID: uc003odu.2_intron_9_0_chr6_33262989_r
GENE: (2)
chr6:33262939-33263145-


(2)
AGO2.ip 		(3)
B-CELL 		(14)
BRAIN 		(8)
BREAST 		(8)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(2)
HELA 		(3)
LIVER 		(1)
OTHER 		(6)
SKIN 		(1)
UTERUS

Sense strand
CAGTCCAGCCCCATCCACAGGCTTCGGGCAGCCTGGGGGGAAGCAACCAGGTGCGGAGGCTGAGGCATTGGACTGGGGTGGGGGTTCCTCAGAAGGCGGGGAAGAGGGGGTGACAGAGCCAGGCCTGTCCTCAGGGCCACTTTTCTCCCTTCCCCAGGGACAGCCTCAGAGTCTTTTCCAGCCTCTGCCAGATTTTCTCCGAGGAGG
..........................................................((....))......((((((........))))))...................................................................................................................
.......................................................56........................................................114...........................................................................................
SizePerfect hitTotal NormPerfect NormGSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577742(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM532880(GSM532880)
G659T. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
............................................................TGAGGCATTGGACTGGGTTGT..............................................................................................................................21111.003.005.00----1.001.00--1.001.00---1.00-1.00----------------------------------
............................................................TGAGGCATTGGACTGGGCTAT..............................................................................................................................21110.003.001.004.00----1.001.00--1.00---1.00-------1.00----------------------------
............................................................TGAGGCATTGGACTGGGCTGT..............................................................................................................................2117.003.00----1.00-1.001.00--------1.001.001.00-----------------------1.00--------
............................................................TGAGGCATTGGACTGGGTTAT..............................................................................................................................2115.003.00----3.00-1.001.00-------------------------------------------
............................................................TGAGGCATTGGACTGGGTAGT..............................................................................................................................2114.003.001.001.00---1.00--------------1.00------------------------------
............................................................TGAGGCATTGGACTGGG..................................................................................................................................1713.003.00-----1.00-------1.00----------------1.00--------------------
............................................................TGAGGCATTGGACTGGGTATT..............................................................................................................................2113.003.001.001.00--1.00----------------------------------------------
............................................................TGAGGCATTGGACTGTAT.................................................................................................................................182.000.00--1.001.00-----------------------------------------------
............................................................TGAGGCATTGGACTGGGCAAT..............................................................................................................................2112.003.00-1.00-----1.00-------------------------------------------
...........................................................................................................................................................AGGGACAGCCTCAGAGTCTTT...............................2112.002.00---------------2.00-----------------------------------
............................................................TGAGGCATTGGACTGGAT.................................................................................................................................182.000.00-----1.00-----1.00---------------------------------------
............................................................TGAGGCATTGGACTGGGTAG...............................................................................................................................2012.003.00---2.00-----------------------------------------------
............................................................TGAGGCATTGGACTGGGCTG...............................................................................................................................2012.003.00-1.00-1.00-----------------------------------------------
............................................................TGAGGCATTGGACTGGGTGG...............................................................................................................................2012.003.00--1.00--------1.00---------------------------------------
...........................................................................................................................................................AGGGACAGCCTCAGAGTCT.................................1912.002.00--------2.00------------------------------------------
............................................................TGAGGCATTGGACTGGGTGAT..............................................................................................................................2111.003.00-----1.00---------------------------------------------
...........................................................................................................................................................AGGGACAGCCTCAGAGTGT.................................191.000.00--------1.00------------------------------------------
............................................................TGAGGCATTGGACTGGGGTGTTT............................................................................................................................231.000.00-1.00-------------------------------------------------
............................................................TGAGGCATTGGACTGGGCT................................................................................................................................1911.003.00------------------------------------1.00--------------
............................................................TGAGGCATTGGACTGGGCAGT..............................................................................................................................2111.003.001.00--------------------------------------------------
............................................................TGAGGCATTGGACTGGGCGG...............................................................................................................................2011.003.00-----------1.00---------------------------------------
............................................................TGAGGCATTGGACTGGGGGTT..............................................................................................................................211.000.00--1.00------------------------------------------------
............................................................TGAGGCATTGGACTGTATA................................................................................................................................191.000.00----------1.00----------------------------------------
....................................................................................................................................................................CTCAGAGTCTTTTCCAGCCTCTGCCAGATT.............3011.001.00------------------1.00--------------------------------
............................................................TGAGGCATTGGACTGGGCCGT..............................................................................................................................2111.003.00--1.00------------------------------------------------
............................................................TGAGGCATTGGACTGGC..................................................................................................................................171.000.00---------1.00-----------------------------------------
............................................................TGAGGCATTGGACTGTAC.................................................................................................................................181.000.00---------1.00-----------------------------------------
...........................................................................................GAAGGCGGGGAAGAGGGGG.................................................................................................1911.001.00---------------------------------1.00-----------------
............................................................TGAGGCATTGGACTGGATAG...............................................................................................................................201.000.00---1.00-----------------------------------------------
............................................................TGAGGCATTGGACTGTGTT................................................................................................................................191.000.00-----------------------1.00---------------------------
............................................................TGAGGCATTGGACTGGACTT...............................................................................................................................201.000.00---------1.00-----------------------------------------
..................................................GTGCGGAGGCTGAGGCTTGG.........................................................................................................................................201.000.00---------------------------------------1.00-----------
...........................................................................................................................................................AGGGACAGCCTCAGAGTCTT................................2011.001.00-------------------1.00-------------------------------
............................................................TGAGGCATTGGACTGGGTTG...............................................................................................................................2011.003.00----1.00----------------------------------------------
............................................................TGAGGCATTGGACTGGGGTATT.............................................................................................................................221.000.00-----------------------------1.00---------------------
...........CATCCACAGGCTTCGGGC..................................................................................................................................................................................1811.001.00--------------------------------1.00------------------
............................................................TGAGGCATTGGACTGGGCTTC..............................................................................................................................2111.003.00-----1.00---------------------------------------------
............................................................TGAGGCATTGGACTGGATAA...............................................................................................................................201.000.00--------------------1.00------------------------------
............................................................TGAGGCATTGGACTGTGT.................................................................................................................................181.000.001.00--------------------------------------------------
...........................................................................................................................................................AGGGACAGCCTCAGAGTCTTTT..............................2211.001.00-------------------1.00-------------------------------
............................................................TGAGGCATTGGACTGGACTA...............................................................................................................................201.000.00--1.00------------------------------------------------
........................................................................................................AGGGGGTGACAGAGCCGTAC...................................................................................201.000.00-------------------------------1.00-------------------
............................................................TGAGGCATTGGACTGGGGAGTT.............................................................................................................................221.000.001.00--------------------------------------------------
............................................................TGAGGCATTGGACTGGGTT................................................................................................................................1911.003.00------------1.00--------------------------------------
................................................................GCATTGGACTGGGGTAGGA............................................................................................................................191.000.00-----------------------------------------1.00---------
........................................................................................................................................CCACTTTTCTCCCTTCCCCAGT.................................................221.000.00---1.00-----------------------------------------------
............................................................TGAGGCATTGGACTGGGTAA...............................................................................................................................2011.003.001.00--------------------------------------------------
............................................................TGAGGCATTGGACTGGACTG...............................................................................................................................201.000.00------------1.00--------------------------------------
............................................................TGAGGCATTGGACTGGA..................................................................................................................................171.000.00--1.00------------------------------------------------
............................................................TGAGGCATTGGACTGGGGTGT..............................................................................................................................211.000.001.00--------------------------------------------------
............................................................TGAGGCATTGGACTGTT..................................................................................................................................171.000.00-----------------1.00---------------------------------
............................................................TGAGGCATTGGACTGGGGTAT..............................................................................................................................211.000.00-------------1.00-------------------------------------
..............CCACAGGCTTCGGGCAGCCTGGGGG........................................................................................................................................................................2511.001.00---------------------------------------------1.00-----
............................................................TGAGGCATTGGACTGGGTTA...............................................................................................................................2011.003.00-------------------------------------1.00-------------
............................................................TGAGGCATTGGACTGGGGTA...............................................................................................................................201.000.00--1.00------------------------------------------------
...........................................................................................................................................................AGGGACAGCCTCAGAGTCTTTTC.............................2311.001.00--------1.00------------------------------------------
.................................................................................................GGGGAAGAGGGGGTGACCA...........................................................................................191.000.00---------------------------1.00-----------------------
.............................................ACCAGGTGCGGAGGCTGAG...............................................................................................................................................1920.500.50----------------------------------------------0.50----
..................................................................ATTGGACTGGGGTGGGGG...........................................................................................................................1820.500.50-----------------------------------------------0.50---
.............................................ACCAGGTGCGGAGGCTGA................................................................................................................................................1820.500.50---------------------0.50-----------------------------

Antisense strand
CAGTCCAGCCCCATCCACAGGCTTCGGGCAGCCTGGGGGGAAGCAACCAGGTGCGGAGGCTGAGGCATTGGACTGGGGTGGGGGTTCCTCAGAAGGCGGGGAAGAGGGGGTGACAGAGCCAGGCCTGTCCTCAGGGCCACTTTTCTCCCTTCCCCAGGGACAGCCTCAGAGTCTTTTCCAGCCTCTGCCAGATTTTCTCCGAGGAGG
..........................................................((....))......((((((........))))))...................................................................................................................
.......................................................56........................................................114...........................................................................................
SizePerfect hitTotal NormPerfect NormGSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577742(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM532880(GSM532880)
G659T. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................................................GGGACAGCCTCAGAGCTT................................. 181.000.00----------------------------1.00----------------------
.............................................................................................AGGCGGGGAAGAGGGAC................................................................................................. 171.000.00----------------------------------------1.00----------
...............................................................................................GCGGGGAAGAGGGGGG................................................................................................ 161.000.00--------------------------1.00------------------------
..................................CTGGTTGCTTCCCCCC............................................................................................................................................................. 1611.001.00-----------------------------------1.00---------------
..........CCATCCACAGGCTTCCCC................................................................................................................................................................................... 181.000.00--------------------------------------1.00------------
...............................................................................................GCGGGGAAGAGGGGGGC............................................................................................... 171.000.00--------------------------------------------1.00------
.......................................................................................................................................................................................TCTGCCAGATTTTCTATGT..... 191.000.00---------------------1.00-----------------------------
...............................................................................................GCGGGGAAGAGGGGGTCCC............................................................................................. 191.000.00----------------------------------1.00----------------
...................................................................................................................................CAGGGCCACTTTTCTGTA.......................................................... 181.000.00-------------------------------------------1.00-------
..................................................................................................................................................................CTGGAAAAGACTCTGAGGC.......................... 1911.001.00------------------------1.00--------------------------
.........................................................................................................................................................................................TGCCAGATTTTCTCCCTA.... 181.000.00-------------------------1.00-------------------------
....................................................................TGGACTGGGGTGGGGTACT........................................................................................................................ 191.000.00------------1.00--------------------------------------
..................................................................................................................................................................GAAAAGACTCTGAGGC............................. 1620.500.50------------------------------------------------0.50--
...............................................................................................ACCCCCTCTTCCCCGC................................................................................................ 1630.330.33-------------------------------------------------0.33-
...............................................................................................................................................................AAAGACTCTGAGGCTGT............................... 1740.250.25--------------------------------------------------0.25