ID: uc003odf.2_intron_4_0_chr6_33170205_f
GENE: (5)
chr6:33170155-33170386+


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(1)
AGO3.ip 		(12)
B-CELL 		(7)
BRAIN 		(12)
BREAST 		(33)
CELL-LINE 		(4)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(3)
HELA 		(10)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(18)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
TGGACACGCTCACAGTCATACACGTGGAAGTCATGGACATGGAAGACAAGGTGAGCCCAGGAACAACTTTCCTGAAAGCTGACTTGCCTGCCTCAGAATCTCCTCATCTTATGGCCCTCAGGAGGGAGAGGACATGTTGGAAGATCTGTTCTCCACTCTGACCAACTCTTTTCTTCCCTCAGAGCGTTCTACCAAGGAGAAGCAGAGCTCAGAGGAAGAAGAAAAGGAAACA
.........................................................................................................................(((((((((((...(((((.(((..((.....)).)))..)))))..)))))).)))))....................................................
..................................................................................................................115................................................................182................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR040010(GSM532895)
G529N. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM339994(GSM339994)
hues6. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191503(GSM715613)
10genomic small RNA (size selected RNA from t. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................................AGGAGGGAGAGGACATGTTG.............................................................................................20112.0012.0011.00---------------1.00-------------------------------------------------------------------------------------------------
.......................................................................................................................AGGAGGGAGAGGACATGTTGGAAG.........................................................................................2418.008.003.00-------5.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................AGCAGAGCTCAGAGGAAGAAGA..........2217.007.00----------3.002.00------------------1.00------------------------------------------------------1.00----------------------------
........................................................................................................................GGAGGGAGAGGACATGTTGGAAG.........................................................................................2316.006.00--------2.00-----------------------2.00------------1.001.00-------------------------------------------------------------------
.................................TGGACATGGAAGACAAGA.....................................................................................................................................................................................1836.000.33---------------3.00-----1.00-----2.00--------------------------------------------------------------------------------------
...........................AAGTCATGGACATGGAAGACA........................................................................................................................................................................................2115.005.00-----4.00-----------------------1.00------------------------------------------------------------------------------------
........................TGGAAGTCATGGACATGGAAGA..........................................................................................................................................................................................2215.005.00--------------5.00---------------------------------------------------------------------------------------------------
.......................................................................................................................AGGAGGGAGAGGACATGTTGGA...........................................................................................2215.005.00---1.00--1.00----------------------------------------1.00-------------------1.00-----------1.00----------------------------------
........................TGGAAGTCATGGACATGGAAGAC.........................................................................................................................................................................................2314.004.00-1.00-1.001.00----1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GCAGAGCTCAGAGGAAGAAGAAAAG......2514.004.00----------------------3.001.00------------------------------------------------------------------------------------------
................................ATGGACATGGAAGACAAGAG....................................................................................................................................................................................204.000.00-----1.00------------------1.001.00--------------------------------------1.00-------------------------------------------------
......................................................................................................................CAGGAGGGAGAGGACATGTTGGA...........................................................................................2314.004.00-------------1.00-------------------------------1.00--1.00---------------------------------------------------1.00-------------
........................................................................................................................................................................................................AGCAGAGCTCAGAGGAAGAAGAAAAGGA....2814.004.00----------1.003.00------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CCAAGGAGAAGCAGAGCTCAGAGGAA...............2614.004.00-------------------4.00----------------------------------------------------------------------------------------------
........................TGGAAGTCATGGACATGGAAGACA........................................................................................................................................................................................2414.004.00------------------------1.00------------------------1.00-----------------------------------------1.00----1.00-----------------
..........................GAAGTCATGGACATGGAAGACAAGA.....................................................................................................................................................................................2513.001.00-------1.00--2.00-------------------------------------------------------------------------------------------------------
.........................GGAAGTCATGGACATGGA.............................................................................................................................................................................................1813.003.00--1.00------------------1.00-------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................CCAAGGAGAAGCAGAGCTCAGAGGA................2513.003.00---1.00-------------------------------------------------------1.00---------------1.00--------------------------------------
........................................................................................................................................................................................................AGCAGAGCTCAGAGGAAGAAGAA.........2313.003.00-----------------------3.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................................AGCAGAGCTCAGAGGAAGAAG...........2113.003.00-1.00----2.00-----------------------------------------------------------------------------------------------------------
......................CGTGGAAGTCATGGACATGGAAGAC.........................................................................................................................................................................................2513.003.00---------1.00--1.00-----1.00-----------------------------------------------------------------------------------------------
..............................TCATGGACATGGAAGACAAGA.....................................................................................................................................................................................2113.001.00-1.00-----------------------1.00-----------------------------------------------------------------------------1.00----------
.........................GGAAGTCATGGACATGGAAGACA........................................................................................................................................................................................2312.002.00-------1.00---------1.00------------------------------------------------------------------------------------------------
............................AGTCATGGACATGGAAGA..........................................................................................................................................................................................1812.002.00------1.00--------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................CACTCTGACCAACTCTTTTCTTCCCTCAGAGCG..............................................3312.002.00-------------------------------------------------------------------------1.00----1.00-----------------------------------
...............................................................................................................................................................GACCAACTCTTTTCTTCCCTCAGT.................................................242.000.00--------------------2.00---------------------------------------------------------------------------------------------
.................................TGGACATGGAAGACAAGAG....................................................................................................................................................................................1932.000.33-2.00----------------------------------------------------------------------------------------------------------------
......................CGTGGAAGTCATGGACATGGAAGA..........................................................................................................................................................................................2412.002.00-------1.00--------------------------------------------------------------------------------1.00-------------------------
.......................GTGGAAGTCATGGACATGGAAGACAAG......................................................................................................................................................................................2712.002.00--1.00-----------------------------------1.00---------------------------------------------------------------------------
......................CGTGGAAGTCATGGACATGGAAG...........................................................................................................................................................................................2312.002.00----------------------------1.00------------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................CAGAGGAAGAAGAAAAGGAAACA2312.002.00------1.001.00----------------------------------------------------------------------------------------------------------
...............................CATGGACATGGAAGACAAG......................................................................................................................................................................................1912.002.00------1.00--------------------------------------------1.00--------------------------------------------------------------
......................CGTGGAAGTCATGGACATGGAAGACAAGAGC...................................................................................................................................................................................3112.001.00--2.00---------------------------------------------------------------------------------------------------------------
..........................................................................................................................AGGGAGAGGACATGTTGGAA..........................................................................................2012.002.00------------------------------------2.00-----------------------------------------------------------------------------
................CATACACGTGGAAGTCATGGACATGGAAGACAAGGT....................................................................................................................................................................................3612.002.00--2.00---------------------------------------------------------------------------------------------------------------
.........................GGAAGTCATGGACATGGAAGA..........................................................................................................................................................................................2112.002.00-------------1.00--------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................AGAAGCAGAGCTCAGAGGAAGAAGA..........2512.002.00---1.00------------------------------------------------------1.00-------------------------------------------------------
.......................................................................................................................AGGAGGGAGAGGACATGTTGG............................................................................................2112.002.00--------------------------1.00------1.00--------------------------------------------------------------------------------
........................TGGAAGTCATGGACATGGAAGACAAGA.....................................................................................................................................................................................2712.001.00------------1.00------------------1.00----------------------------------------------------------------------------------
.......................................................................................................................AGGAGGGAGAGGACATGTTGGAA..........................................................................................2312.002.00-----2.00------------------------------------------------------------------------------------------------------------
...........................AAGTCATGGACATGGAAGA..........................................................................................................................................................................................1912.002.00------1.00-------------------------------------------1.00---------------------------------------------------------------
........................................................................................................................GGAGGGAGAGGACATGTTGGAAGT........................................................................................2412.006.00---1.00--------------------------------------------------------------1.00-----------------------------------------------
..........CACAGTCATACACGTGGAAGTCATG.....................................................................................................................................................................................................2512.002.00------------------1.00-------------------------------------------------------------1.00---------------------------------
.................................TGGACATGGAAGACAAGAGC...................................................................................................................................................................................2032.000.33-------------1.00--------------------------------------------------------------1.00-------------------------------------
..........................................................................................................................................................................................................CAGAGCTCAGAGGAAGAAGAAAAGG.....2512.002.00-1.00----------------------------1.00-----------------------------------------------------------------------------------
....................CACGTGGAAGTCATGGA...................................................................................................................................................................................................1721.501.50-----------1.00----------------------------------------------------------------------------------------------------0.50-
..................................................................................................................................................................................................AGGAGAAGCAGAGCTCAGA...................1921.501.50---------------0.50--------------------------------0.50--------------------------------------------------------------0.50--
......................CGTGGAAGTCATGGACATGGAAGACAAGAGCG..................................................................................................................................................................................3211.001.00----1.00-------------------------------------------------------------------------------------------------------------
.......................GTGGAAGTCATGGACATGGA.............................................................................................................................................................................................2011.001.00-------------------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................................GCAGAGCTCAGAGGAAGAAGAT.........221.000.00-----------------------------------------------1.00------------------------------------------------------------------
...................................GACATGGAAGACAAGAGCG..................................................................................................................................................................................191.000.00---------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GAGAAGCAGAGCTCAGAGGAAGAAGAAC........2811.001.00-----------------------------------------------------------------------------------------------1.00------------------
.................ATACACGTGGAAGTCATGGACATGGAAGACAAG......................................................................................................................................................................................3311.001.00--1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GAGCGTTCTACCAAGGAGAA...............................2011.001.00----------------------------------------1.00-------------------------------------------------------------------------
.................ATACACGTGGAAGTCATGGA...................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------1.00------------
............................................................................................................................................................................................CTACCAAGGAGAAGCAGAGCTCAGAG..................2611.001.00---------1.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................AGGAGAAGCAGAGCTACCA...................191.000.00----------------------------------------------------------------------------------1.00-------------------------------
.........................................................................................................................................................................................GTTCTACCAAGGAGAAGCAGAGCTCAGAG..................2911.001.00------------------------------------------------------1.00-----------------------------------------------------------
...................ACACGTGGAAGTCATGGATTT................................................................................................................................................................................................211.000.00-------------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................................................................................GGAGAAGCAGAGCTCAGAGGAAG..............2311.001.00--------------------------1.00---------------------------------------------------------------------------------------
.......................GTGGAAGTCATGGACATGGAAGA..........................................................................................................................................................................................2311.001.00--------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................CCAAGGAGAAGCAGAGCTCAGA...................2211.001.00-------------------------------------------------------1.00----------------------------------------------------------
....................................................................................................................................................................................................GAGAAGCAGAGCTCAGAGGAAGAAGAAA........2811.001.00-------------------------------------------------------------------------------------------------1.00----------------
........................................................................................................................................................................................................AGCAGAGCTCAGAGGAAGAAGAAAAG......2611.001.00-1.00----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TGACCAACTCTTTTCTTCCCTCAG..................................................2411.001.00--------------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................TGTTCTCCACTCTGACGCGC..................................................................201.000.00-------------------------------------1.00----------------------------------------------------------------------------
.........................GGAAGTCATGGACATGGAA............................................................................................................................................................................................1911.001.00-----------------------------------1.00------------------------------------------------------------------------------
.......................................................................................................................................................................................................AAGCAGAGCTCAGAGGAAGAAGAAAAGGAAAC.3211.001.00------------------------------------------------------------------------------------------------------1.00-----------
...........ACAGTCATACACGTGGAAGTCATGGACATG...............................................................................................................................................................................................3011.001.00----1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CCAAGGAGAAGCAGAGCTCAGAG..................2311.001.00----------------------------1.00-------------------------------------------------------------------------------------
...................ACACGTGGAAGTCATGGACATGGAAGACAA.......................................................................................................................................................................................3011.001.00------------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GAGAAGCAGAGCTCAGAGGAAGAAGA..........2611.001.00----------------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................ACCAAGGAGAAGCAGAGCTCA.....................2111.001.00--------------------------------------------------------------------------------------------------------1.00---------
......................CGTGGAAGTCATGGACATGGAAGACAAGAGCT..................................................................................................................................................................................3211.001.00----------------------------------------------------------------------------------------------------------1.00-------
..............................TCATGGACATGGAAGACAAGAGCG..................................................................................................................................................................................2411.001.00-------------------------1.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CAGAGCTCAGAGGAAGAAGAAAAGGAAA..2811.001.00-------1.00----------------------------------------------------------------------------------------------------------
..................TACACGTGGAAGTCATGGACATGG..............................................................................................................................................................................................2411.001.00---1.00--------------------------------------------------------------------------------------------------------------
.....................ACGTGGAAGTCATGGACATGGAAGA..........................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------------1.00------------------------------
..................................................................................................................................................................................................AGGAGAAGCAGAGCTCAGAGG.................2111.001.00-----1.00------------------------------------------------------------------------------------------------------------
..............................TCATGGACATGGAAGACAAG......................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------1.00------
........................................................................................................................GGAGGGAGAGGACATGTTGGAAGA........................................................................................2411.001.00----------------1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................AGCAGAGCTCAGAGGAAGAGGA..........221.000.00------------------------------------------------------------1.00-----------------------------------------------------
..........CACAGTCATACACGTGGAAGTCATGGACATGG..............................................................................................................................................................................................3211.001.00----------------------------------------------------------------------1.00-------------------------------------------
...................................................................................................................................................GTTCTCCACTCTGACGATC..................................................................191.000.00-----------------------------------------1.00------------------------------------------------------------------------
........................TGGAAGTCATGGACATGGAAGACACACG....................................................................................................................................................................................2811.004.00-----------------------------------------------------------------------------------------1.00------------------------
....................................................................................................................................................................................AGAGCGTTCTACCAAGGAGAAGCAGAGCT.......................2911.001.00---------------------------------------------------------------1.00--------------------------------------------------
.....................ACGTGGAAGTCATGGACATGGAAGACAAGAG....................................................................................................................................................................................3111.001.00--------------------------------------------1.00---------------------------------------------------------------------
.....................ACGTGGAAGTCATGGACATGGAAGACAAG......................................................................................................................................................................................2911.001.00---------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................AAGGAGAAGCAGAGCTCAGAGGAAGAAGA..........2911.001.00--------------------------------------------------------------------------------------------------1.00---------------
................CATACACGTGGAAGTCATGGACATGGAAGACAAGA.....................................................................................................................................................................................351.000.00--1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CTCAGAGGAAGAAGAAAAGGA....2111.001.00-----------------------------------------------------------------1.00------------------------------------------------
................CATACACGTGGAAGTCATGGACAT................................................................................................................................................................................................2411.001.00-----------------------------------------------------------------------------1.00------------------------------------
..................TACACGTGGAAGTCATGGACATGGAAGAC.........................................................................................................................................................................................2911.001.00------------1.00-----------------------------------------------------------------------------------------------------
........................TGGAAGTCATGGACATGGAAGACAAGAGC...................................................................................................................................................................................2911.001.00------------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AGAGGAAGAAGAAAAGGAAACA2211.001.00---------------------------------------------------------------------------------------------------1.00--------------
....................................................................................................................................................................................................GAGAAGCAGAGCTCAGAGGAAG..............2211.001.00---1.00--------------------------------------------------------------------------------------------------------------
.........................GGAAGTCATGGACATGGAAGAC.........................................................................................................................................................................................2211.001.00---------------------------------------1.00--------------------------------------------------------------------------
.......................GTGGAAGTCATGGACATGGAAG...........................................................................................................................................................................................2211.001.00-1.00----------------------------------------------------------------------------------------------------------------
...............................CATGGACATGGAAGACAA.......................................................................................................................................................................................1811.001.00----------------1.00-------------------------------------------------------------------------------------------------
...........ACAGTCATACACGTGGAAGTC........................................................................................................................................................................................................2111.001.00--------------------------------------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................................................CAGAGCTCAGAGGAAGAAGAAA........2211.001.00----------------------------------1.00-------------------------------------------------------------------------------
.....................ACGTGGAAGTCATGGACATGGAAGACA........................................................................................................................................................................................2711.001.00----1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................CAAGGAGAAGCAGAGCTCAGA...................2111.001.00----------------------------------------------1.00-------------------------------------------------------------------
....................CACGTGGAAGTCATGGACATGG..............................................................................................................................................................................................2211.001.00-------1.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................AAGGAGAAGCAGAGCTCAGAGGAAG..............2511.001.00----1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................TGTTCTCCACTCTGACGCGA..................................................................201.000.00-------------------------------------1.00----------------------------------------------------------------------------
................CATACACGTGGAAGTCATGGACATGGAAGT..........................................................................................................................................................................................301.000.00-------------------------------------------1.00----------------------------------------------------------------------
...........................AAGTCATGGACATGGAAGAC.........................................................................................................................................................................................2011.001.00------------------------------------------1.00-----------------------------------------------------------------------
..............................TCATGGACATGGAAGACA........................................................................................................................................................................................1811.001.00---------------------------------------------------------1.00--------------------------------------------------------
......................................................................................................................................................................................................GAAGCAGAGCTCAGAGGAAGAAG...........2311.001.00---1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................AGGAGAAGCAGAGCTCAGAGGAT...............2311.001.00-1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TACCAAGGAGAAGCAGAGCTCAGAG..................2511.001.00------------------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................ACCAAGGAGAAGCAGAGC........................1811.001.00-------------------------------------------------------------1.00----------------------------------------------------
...................................................................................................................................................................AACTCTTTTCTTCCCTCATG.................................................201.000.00----------------------------------------------------1.00-------------------------------------------------------------
......................................................................................................................CAGGAGGGAGAGGACATGTTG.............................................................................................2111.001.00-----------------1.00------------------------------------------------------------------------------------------------
.................ATACACGTGGAAGTCATGGAC..................................................................................................................................................................................................2111.001.00-------------1.00----------------------------------------------------------------------------------------------------
..........CACAGTCATACACGTGGAAGCC........................................................................................................................................................................................................221.000.00--------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................CCAAGGAGAAGCAGAGCTCAGAGGATTTT............2911.003.00------------------------------------------------------------------------------------1.00-----------------------------
................CATACACGTGGAAGTCATGGACATGGAAGACAAGG.....................................................................................................................................................................................3511.001.00--1.00---------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TCTGACCAACTCTTTTCTTCCCTCAGA.................................................2711.001.00---------------------------------------1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................TCAGAGGAAGAAGAAAAGGAAAC.2311.001.00---------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CCAAGGAGAAGCAGAGATC......................191.000.00-----------------1.00------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CTCAGAGGAAGAAGAAAAGGTT...221.000.00------1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................AAGCAGAGCTCAGAGGAAGAAGAAA........2511.001.00-1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................CATGTTGGAAGATCTGCAA.................................................................................191.000.00---------------------------------------------------------------------------------1.00--------------------------------
................CATACACGTGGAAGTCATGGACATGGAAGACA........................................................................................................................................................................................3211.001.00--1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................ACCAAGGAGAAGCAGAGCTCAGA...................2311.001.00----1.00-------------------------------------------------------------------------------------------------------------
.......................GTGGAAGTCATGGACATGGAAGACAA.......................................................................................................................................................................................2611.001.00-1.00----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CCAAGGAGAAGCAGAGCTAA.....................201.000.00-------------1.00----------------------------------------------------------------------------------------------------
.....................ACGTGGAAGTCATGGACATGGAAGACAA.......................................................................................................................................................................................2811.001.00---------------------------------1.00--------------------------------------------------------------------------------
.......................................................................................................................................................................................................AAGCAGAGCTCAGAGGTAGA.............201.000.00---1.00--------------------------------------------------------------------------------------------------------------
.....................ACGTGGAAGTCATGGACATGGAAGACAAGAGCG..................................................................................................................................................................................3311.001.00----1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................AAGGAGAAGCAGAGCTCAGAGGAAGAAGAA.........3011.001.00--------------------------------------------------------------------------------------1.00---------------------------
.......................GTGGAAGTCATGGACATGGAAGACAAGAG....................................................................................................................................................................................2911.002.00-------1.00----------------------------------------------------------------------------------------------------------
................................ATGGACATGGAAGACAAGAGCG..................................................................................................................................................................................221.000.00----------------------------------------------------------------------------------------------1.00-------------------
.........................................................................................................................GAGGGAGAGGACATGTTGGAAG.........................................................................................2211.001.00----------------------------------------1.00-------------------------------------------------------------------------
........................................................................................................................GGAGGGAGAGGACATGTTGGA...........................................................................................2111.001.00---------------------------------------------------------------------------------------1.00--------------------------
..............................TCATGGACATGGAAGACAAGAG....................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------------------------------------1.00--------
........................TGGAAGTCATGGACATGGAAGACAAG......................................................................................................................................................................................2611.001.00------------------------------------------------------------------------------------------1.00-----------------------
...............TCATACACGTGGAAGTCATGGACAT................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------1.00------------------------------------------
................................ATGGACATGGAAGACAAGA.....................................................................................................................................................................................191.000.00-----------------------------------1.00------------------------------------------------------------------------------
..........................................................................................................................AGGGAGAGGACATGTTGGAAGA........................................................................................2211.001.00--------------------------------------------------------------------------------------------1.00---------------------
..............GTCATACACGTGGAAGTC........................................................................................................................................................................................................1811.001.00----------------------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................AGAGCGTTCTACCAAGG...................................1711.001.00---------1.00--------------------------------------------------------------------------------------------------------
..........................GAAGTCATGGACATGGAAGACAAG......................................................................................................................................................................................2411.001.00-1.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................AGGAGAAGCAGAGCTCAA....................1841.000.50---------------------1.00--------------------------------------------------------------------------------------------
................................................................................................................................................................ACCAACTCTTTTCTTCCCTCA...................................................2111.001.00--------------------1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GCAGAGCTCAGAGGAAGAAGAAAA.......2411.001.00---------------------------------------------------------------------------------------------1.00--------------------
.................................................................................................................................................................................................AAGGAGAAGCAGAGCTCAGAGG.................2211.001.00------------------------1.00-----------------------------------------------------------------------------------------
......................CGTGGAAGTCATGGACATGGAAGACAAG......................................................................................................................................................................................2811.001.00------------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................AGGAGAAGCAGAGCTCAGAGGA................2211.001.00---------------1.00--------------------------------------------------------------------------------------------------
......................CGTGGAAGTCATGGACATGGAAGACA........................................................................................................................................................................................2611.001.00---------------------------------------------------------------------1.00--------------------------------------------
........................TGGAAGTCATGGACATGGAAG...........................................................................................................................................................................................2111.001.00----1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GAGAAGCAGAGCTCAGAGGAAGAAGAA.........2711.001.00------------------------------------------------------------------------1.00-----------------------------------------
......................................................................................................................CAGGAGGGAGAGGACATGTTGG............................................................................................2211.001.00-----------------1.00------------------------------------------------------------------------------------------------
.....................ACGTGGAAGTCATGGACATGGAAGACAAGAGC...................................................................................................................................................................................3211.001.00----------------------------------1.00-------------------------------------------------------------------------------
........................................................................................................................................................................................................AGCAGAGCTCAGAGGAAGAAGAAAACGA....281.000.00--------------------------------------------------------------------------1.00---------------------------------------
.......................................................................................................................................................................................................AAGCAGAGCTCAGAGGAAGAAGAAAAG......2711.001.00--------------------------------------------1.00---------------------------------------------------------------------
............................................................................................................................................................................................CTACCAAGGAGAAGCAGAGC........................2011.001.00-------1.00----------------------------------------------------------------------------------------------------------
...............................CATGGACATGGAAGAC.........................................................................................................................................................................................1640.750.75------------0.50----------------0.25------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GCAGAGCTCAGAGGAAGA.............1820.500.50------------------------------------------------------------------------------------------------------------0.50-----
..................................................................................................................................................................................................AGGAGAAGCAGAGCTCAGAG..................2020.500.50----------------0.50-------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................AAGCAGAGCTCAGAGGAA...............1820.500.50-----------------------------0.50------------------------------------------------------------------------------------
..................................................................................................................................................................................................AGGAGAAGCAGAGCTCAG....................1820.500.50-0.50----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................AAGCAGAGCTCAGAGGAAGA.............2020.500.50--------------------------------------------------------------------------------------------------------------0.50---
..................................................................................................................................................................................................AGGAGAAGCAGAGCTCA.....................1740.500.50------------------------0.25------------------------0.25----------------------------------------------------------------
.......................................................................................................................................................................................................AAGCAGAGCTCAGAGGAAGAA............2120.500.50-------------------------------------------------------------------------------------------------------------0.50----
.................................TGGACATGGAAGACAA.......................................................................................................................................................................................1650.400.40-------------------------------0.20---------------------------------------------------------------------------------0.20
..........................................................................................................................................................................................................CAGAGCTCAGAGGAAGAA............1830.330.33---0.33--------------------------------------------------------------------------------------------------------------
.................................TGGACATGGAAGACAAG......................................................................................................................................................................................1730.330.33-------------0.33----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AGAGGAAGAAGAAAAGGAAA..2040.250.25------------------------------0.25-----------------------------------------------------------------------------------
..............................................................................................................................AGAGGACATGTTGGAA..........................................................................................1650.200.20--------------0.20---------------------------------------------------------------------------------------------------
..................................GGACATGGAAGACAAG......................................................................................................................................................................................1660.170.17--------------------------------------------------0.17---------------------------------------------------------------
.......................GTGGAAGTCATGGAC..................................................................................................................................................................................................1590.110.11----0.11-------------------------------------------------------------------------------------------------------------

Antisense strand
TGGACACGCTCACAGTCATACACGTGGAAGTCATGGACATGGAAGACAAGGTGAGCCCAGGAACAACTTTCCTGAAAGCTGACTTGCCTGCCTCAGAATCTCCTCATCTTATGGCCCTCAGGAGGGAGAGGACATGTTGGAAGATCTGTTCTCCACTCTGACCAACTCTTTTCTTCCCTCAGAGCGTTCTACCAAGGAGAAGCAGAGCTCAGAGGAAGAAGAAAAGGAAACA
.........................................................................................................................(((((((((((...(((((.(((..((.....)).)))..)))))..)))))).)))))....................................................
..................................................................................................................115................................................................182................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR040010(GSM532895)
G529N. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM339994(GSM339994)
hues6. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191503(GSM715613)
10genomic small RNA (size selected RNA from t. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................TCAGAATCTCCTCATACTT......................................................................................................................... 191.000.00--------------------------------------------------------------------1.00---------------------------------------------
..................................................................................................................................................................CAACTCTTTTCTTCCCTCA................................................... 191.000.00------------------------------------------1.00-----------------------------------------------------------------------
........................................................................................................................................................CCACTCTGACCAACTTGTG............................................................. 191.000.00-----------------------------------------1.00------------------------------------------------------------------------
........................................................................................................................................................CCACTCTGACCAACTTGT.............................................................. 181.000.00--------------------------------------------------------1.00---------------------------------------------------------