ID: uc003ode.1_intron_1_0_chr6_33165719_r
GENE: RXRB(1)
chr6:33165669-33166134-


(1)
AGO2.ip
(1)
B-CELL
(4)
BRAIN
(6)
BREAST
(25)
CELL-LINE
(5)
CERVIX
(6)
HEART
(1)
HELA
(6)
LIVER
(2)
OTHER
(30)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
CCCTGGGGCTGGCAAACGGCTATGTGCAATCTGCGGGGACAGAAGCTCAGGTATGTGGCTCAGAGGATGAACAGAGAGGGAGAGTCTGGGCCATGTATCATCACCTGTGGGATTCCCAGGGCTTATGGAGTTTGGTCAGAGCAAGTGACCTGGGGGAGGCCTGATGGGAGTAAAGAAGCTGAAGCTGAGATGTAGGACGCGATTGGGGGGAAGGTCAGAGGGAAAAGGAAGCAGCGTGTAGGGTTTCTGAACAGTGAGGAGACTGGGACTGGATCATCACTCAGCTCCTGGTTCCCTATCTCTGTATTTGGCAAACAGGGAGGACTTTAAGTTTTGCTAGGGGGAGATTGGAAACAGACTAAATGGTGAAGGTGTCTCCATGCAACCTTCTTATTGCTCCTCCCCTTTCCCTGTAGGCAAACACTACGGGGTTTACAGCTGTGAGGGTTGCAAGGGCTTCTTCAAA
..................................................((((((((((((((....................))))))))))))))..((.(((.(((..(((((..(((((......(((.(((((.((......((....))..))))))).)))......)))))....((((..(((.....))).)))).)))))..))).)))))...((((((..........))))))..........................................................................................................................................................................................................................
..................................................51.........................................................................................................................................................................................................254..................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR029129(GSM416758)
SW480. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR029125(GSM416754)
U2OS. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040034(GSM532919)
G001N. (cervix)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR040017(GSM532902)
G645T. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCAAA........................................................................................................................................................................................................................1875.000.0041.00---2.007.005.00------4.004.001.003.00-----3.00--------1.00---------------------1.001.00-----1.00-------------------1.00---------
.............................................................................................................................................................................................................................................GTAGGGTTTCTGAACTCTG..................................................................................................................................................................................................................1957.000.00-9.007.00----7.00---4.00-----4.002.00-3.00-----1.00-2.002.00--2.001.00-2.00--1.00-1.00-1.00---1.00---------1.00-----1.00----1.00---1.001.001.00-----------1.00----
............................................................................................................................................................................................................................................TGTAGGGTTTCTGAACTCTG..................................................................................................................................................................................................................2022.000.00-6.006.00----1.00---1.00------2.00-----2.00-----------------------1.00-1.00----1.00--------------1.00-------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCCAAA.......................................................................................................................................................................................................................1921.000.002.00---8.001.004.00------1.00-1.001.00--------------1.00----------------------------------1.00-1.00---------------------
................................GCGGGGACAGAAGCTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................1818.008.00--------8.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCCAA........................................................................................................................................................................................................................185.000.002.00----2.00--------1.00---------------------------------------------------------------------------
.............................TCTGCGGGGACAGAAGCTCAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2215.005.00------------5.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCATA........................................................................................................................................................................................................................184.000.003.00-----1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCAAC........................................................................................................................................................................................................................183.000.002.00----1.00------------------------------------------------------------------------------------
..................................................GTATGTGGCTCAGAGGATGA............................................................................................................................................................................................................................................................................................................................................................................................................2013.003.00---3.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCTAA........................................................................................................................................................................................................................183.000.003.00-----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCACA........................................................................................................................................................................................................................183.000.003.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTTGCAAGGGCTTCTTT...203.000.00---2.00--------------------------------------------------------------------------------1.00-----
..................................................GTATGTGGCTCAGAGGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................192.000.00---2.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGTGAGGGTTGCAAGGGCTTCTCC...292.000.00---------2.00--------------------------------------------------------------------------------
.....................................................TGTGGCTCAGAGGATGAACAGA.......................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00-----------------------2.00------------------------------------------------------------------
..................................................GTATGTGGCTCAGAGGATG.............................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00---1.00---------------------------------------------------------------------------1.00----------
........................................................................................................................................................................................................................................................GAACAGTGAGGAGACTGGGACTGGA.................................................................................................................................................................................................2512.002.00----------2.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAGCTGTGAGGGTTG................1912.002.00------------------------------2.00-----------------------------------------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCAGA........................................................................................................................................................................................................................182.000.00----1.00----------1.00--------------------------------------------------------------------------
...TGGGGCTGGCAAACGGCTATGTGCAATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................282.000.00----------2.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTTGCAAGGGCTTCTTTT..222.000.00-----------------------------------------1.00-----------------------------------1.00------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCAAT........................................................................................................................................................................................................................182.000.001.00--------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................CAGACTAAATGGTGAAGGTGT...........................................................................................2112.002.00---------------------------2.00--------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTGAGGGTTGCAAGGG..........2012.002.00----------1.00---------------------------------------------------------------------------1.00---
...............................TGCGGGGACAGAAGCTCAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------------1.00-------------
..........................................................................................................................................................................................................................................................................................AGCTCCTGGTTCCCTGCG......................................................................................................................................................................181.000.00---------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGCTGTGAGGGTTGCAAGGGCTTCTCC...311.000.00---------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTTGCAAGGGCTTCTTTT..211.000.00---------------------------------------------------------------1.00--------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCAAG........................................................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------------------------
.......................................................................CAGAGAGGGAGAGTCT...........................................................................................................................................................................................................................................................................................................................................................................................1671.001.00-------------------0.43--------------------------------------------------------------------0.430.14
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCTTA........................................................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTTGCAAGGGCTTCTTCT..221.000.00---------------------1.00--------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTTGCAAGGGCTTCTTCA..2111.001.00--------------------------------------------1.00---------------------------------------------
..................................................................ATGAACAGAGAGGGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------1.00-------------------------
..................................................GTATGTGGCTCAGAGGAT..............................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GGAGGACTTTAAGTTGG...................................................................................................................................171.000.00----------------------------------1.00-------------------------------------------------------
.............................................................................................................................................................................................................GGGGGAAGGTCAGAGGGAAAGTC..............................................................................................................................................................................................................................................231.000.00----------------------------------------------------------------------------------1.00-------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCGAA........................................................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTGAGGGTTGCAAGG...........1911.001.00----------1.00-------------------------------------------------------------------------------
................................................AGGTATGTGGCTCAGAGGATGAAC..........................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-------------------------------------------1.00----------------------------------------------
............................................................................................................GGGATTCCCAGGGCTCTGA...................................................................................................................................................................................................................................................................................................................................................191.000.001.00-----------------------------------------------------------------------------------------
.............................TCTGCGGGGACAGAAGCTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------1.00---------------
.......................................................................................................................................................................................GCTGAGATGTAGGACG...........................................................................................................................................................................................................................................................................1611.001.00------------------------------------1.00-----------------------------------------------------
..................................................................................................................................................................................................................................GGAAGCAGCGTGTAGTG...............................................................................................................................................................................................................................171.000.00---------------------------------------------------------------------------1.00--------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGAGGGTTGCAAGGGCTCCTT....241.000.00---------1.00--------------------------------------------------------------------------------
................................GCGGGGACAGAAGCTCAGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00---------------------------------------------------------------------------------------1.00--
..CTGGGGCTGGCAAACGGCTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------1.00-------------------------------------------------------
.............AAACGGCTATGTGCAATCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------------------------------------------------------1.00--------------------------------
.............................TCTGCGGGGACAGAAGCTCAGGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................2511.005.00---------------------------------------1.00--------------------------------------------------
.............................TCTGCGGGGACAGAAGCTCAGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.005.00-----------------------------------------------------------1.00------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAGGGTTGCAAGGGCTTC......2111.001.00---1.00--------------------------------------------------------------------------------------
............................................................CAGAGGATGAACAGAGGGTG..................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------------------------------------------------------------------1.00--------------------
..........................................................................................................................................................................................................................................CGTGTAGGGTTTCTGAACTCTG..................................................................................................................................................................................................................221.000.00-----------1.00------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................GCGTGTAGGGTTTCTCAT.......................................................................................................................................................................................................................181.000.00---------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................GACTGGGACTGGATCATA............................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------------------------
..................................................GTATGTGGCTCAGAGGATGAACAGAG......................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---1.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCTGAACA.....................................................................................................................................................................................................................2111.001.00-------1.00----------------------------------------------------------------------------------
..........GGCAAACGGCTATGTGCAATCTGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00---------------------------------------------------------------------------------1.00--------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCTCA........................................................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------------------------
............CAAACGGCTATGTGCAATCCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-------------------------1.00----------------------------------------------------------------
........................................................................................................................................................................................................................................AGCGTGTAGGGTTTCCCA........................................................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------------------------
............CAAACGGCTATGTGCAACCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------------------1.00----------------------------------------------------------------
............CAAACGGCTATGTGCAATCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------1.00--------------------------------------------------------------------
................................................................................................................................AGTTTGGTCAGAGCACTC................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------1.00----------------------------------------
......................................................................................................................................................................................................................................................................CTGGGACTGGATCATCACT.........................................................................................................................................................................................1911.001.00---1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTTGCAAGGGCTTAAA....201.000.00----------------------------------------------------1.00-------------------------------------
................................................AGGTATGTGGCTCAGAGGATGAA...........................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00------------------------------------------------------------------------------1.00-----------
..............................CTGCGGGGACAGAAGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------1.00------
.................................CGGGGACAGAAGCTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------------------------1.00--------------------------------------
..................................GGGGACAGAAGCTCAGGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGTGAGGGTTGCAAGGG..........2111.001.00----------1.00-------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TTGCTCCTCCCCTTTCC........................................................1711.001.00-------------------------------------------------------------1.00----------------------------
..............................................................................................................................................................................................................................................................TGAGGAGACTGGGACTGGA.................................................................................................................................................................................................1911.001.00-----------------------------------------------1.00------------------------------------------
....................................................................................................................................................................................................................GGTCAGAGGGAAAAGGAAGC..........................................................................................................................................................................................................................................2020.500.50------------------------------------0.50-----------------------------------------------------

Antisense strand
CCCTGGGGCTGGCAAACGGCTATGTGCAATCTGCGGGGACAGAAGCTCAGGTATGTGGCTCAGAGGATGAACAGAGAGGGAGAGTCTGGGCCATGTATCATCACCTGTGGGATTCCCAGGGCTTATGGAGTTTGGTCAGAGCAAGTGACCTGGGGGAGGCCTGATGGGAGTAAAGAAGCTGAAGCTGAGATGTAGGACGCGATTGGGGGGAAGGTCAGAGGGAAAAGGAAGCAGCGTGTAGGGTTTCTGAACAGTGAGGAGACTGGGACTGGATCATCACTCAGCTCCTGGTTCCCTATCTCTGTATTTGGCAAACAGGGAGGACTTTAAGTTTTGCTAGGGGGAGATTGGAAACAGACTAAATGGTGAAGGTGTCTCCATGCAACCTTCTTATTGCTCCTCCCCTTTCCCTGTAGGCAAACACTACGGGGTTTACAGCTGTGAGGGTTGCAAGGGCTTCTTCAAA
..................................................((((((((((((((....................))))))))))))))..((.(((.(((..(((((..(((((......(((.(((((.((......((....))..))))))).)))......)))))....((((..(((.....))).)))).)))))..))).)))))...((((((..........))))))..........................................................................................................................................................................................................................
..................................................51.........................................................................................................................................................................................................254..................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR029129(GSM416758)
SW480. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR029125(GSM416754)
U2OS. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040034(GSM532919)
G001N. (cervix)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029126(GSM416755)
143B. (cell line)
SRR040017(GSM532902)
G645T. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
............................................................................................................................................................................................................................................................................................................................................TTTGCTAGGGGGAGATTTA................................................................................................................... 193.000.00-------------------3.00----------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................CACTCAGCTCCTGGTTCTT.......................................................................................................................................................................... 192.000.00---------2.00--------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................TAAATGGTGAAGGTGATT......................................................................................... 181.000.00--------------------------1.00---------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................CATGCAACCTTCTTATTC...................................................................... 181.000.00-----------------------------------------------------------------1.00------------------------
...................................................................................................................................................CCCATCAGGCCTCCCCCAGGT.......................................................................................................................................................................................................................................................................................................... 2111.001.00---------------------------------1.00--------------------------------------------------------
.................................................................................GAGTCTGGGCCATGTATCTA............................................................................................................................................................................................................................................................................................................................................................................. 201.000.00----------------------------------------------------------1.00-------------------------------
................................................................................................................................................................................AGCTGAAGCTGAGATACA................................................................................................................................................................................................................................................................................ 181.000.00-------------------------------------1.00----------------------------------------------------
...........................................................................................................................................................................AAAGAAGCTGAAGCTGACCT................................................................................................................................................................................................................................................................................... 201.000.00---------------------1.00--------------------------------------------------------------------