uc003ocb.1_intron_0_0_chr6_32790096

ATGGCATAGAAGAAAATTTTTTTATGAAGCAAGTATAATATTGATGTTAAACTATGACAATGCACAAATATAAAAATTGTAGATGAATTTACTTATTATACTGACACAAAAATCCTAAATAAAACATTGCAAACAGATTCTAGCACAGATTAAAAAACACCCATTAAGATCAAGGGGTTTTTTTTGTTTTTTTTTTCTAGAAAACCCTTTGGAAGTTCATGATATTTTGAATTTCAATGGATATTTCCTG ....................................................................(((((.....(((((....)))))...))))).....................................((((((...(((.(((((((.((((.((......)).)))).)))))))....)))...))))))................................................ ....................................................................69.......................................................................................................................................206..........................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast)	SRR390723(GSM850202) total small RNA. (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR037937(GSM510475) 293cand2. (cell line)	SRR189785	SRR060168(GSM565978) 5-8F_nucleus. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTTTGG................................................	24		3.00	0.00	-	3.00	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTTTCC................................................	24		3.00	0.00	-	3.00	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATCAAGGGGTTTTTTTTGTTTTTTTCTTC.....................................................	29		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-
.........................................................................AAATTGTAGATGAATTTAA..............................................................................................................................................................	19	1	2.00	1.00	-	-	1.00	1.00	-	-	-	-	-	-	-
.........................................................................AAATTGTAGATGAATTT................................................................................................................................................................	17	2	2.00	2.00	-	-	0.50	1.50	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCGAC..................................................	22		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................TCAAGGGGTTTTTTTTGTTTTTTTTCTC.....................................................	28		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTAGGGC...............................................	25		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTTTCC................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................TTTGTTTTTTTTTTCGGGT.................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTAACTA...............................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TTTTTTGTTTTTTTTTTCTCGG.................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTAGGG................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTTC..................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCGGAG.................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................AGGGGTTTTTTTTGTTTTTTTC........................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................GTTTTTTTTGTTTTTTTTTTCTTCCC................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................AGGGGTTTTTTTTGTTTTTTTGCC......................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTTGTT................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTATGG................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................GGGTTTTTTTTGTTTCCC..........................................................	18		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................AGGGGTTTTTTTTGTTTCCC..........................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................AGGGGTTTTTTTTGTTAGAA..........................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TTTTTTGTTTTTTTTTTCTAGAGCC..............................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTTTAG................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................TTTTTGTTTTTTTTTTCGGC..................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTGGTG................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................GGGGTTTTTTTTGTTTTCAG.........................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................AAATTGTAGATGAATTTAAACA...........................................................................................................................................................	22	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-
......................................................................................................................................................................................TTTGTTTTTTTTTTCTACAGT...............................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTAAC.................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTCTTG................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTGTTG................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTTTTG................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TTTTTTGTTTTTTTTTTCTAGGGC...............................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCGTT..................................................	23		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCGGAG.................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................AAGGGGTTTTTTTTGTTTGTC..........................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTCGG.................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................TTTTTGTTTTTTTTTTCTAGACGG..............................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................AAATTGTAGATGAATTTAAA.............................................................................................................................................................	20	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTAGGGC...............................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................TTTTTGTTTTTTTTTTCTAGTAT...............................................	23		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-
................................................................................................................................................................................GTTTTTTTTGTTTTTTTTTTCGCC..................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................GTTTTTTTTGTTTTTTTTTCGAG...................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................TTTGTTTTTTTTTTCTAGGGTG..............................................	22		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00
...................................................................................................................................................................................TTTTTTGTTTTTTTTTTCGTA..................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................AAATTGTAGATGAATTTA...............................................................................................................................................................	18	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-	-
..............................................................................................................................................................................GGGTTTTTTTTGTTTCGC..........................................................	18		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................................TTTTGTTTTTTTTTTCGCG..................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCAAC..................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................AGGGGTTTTTTTTGTTTGGGT.........................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
..................................ATAATATTGATGTTAAACTATGACAA..............................................................................................................................................................................................	26	1	1.00	1.00	-	-	-	-	-	-	-	-	-	1.00	-
......................................................................................................................................................................................TTTGTTTTTTTTTTCGGC..................................................	18		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................TTTTTGTTTTTTTTTTCTAGGA................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................GGGTTTTTTTTGTTTTTTTTTTC.....................................................	23	2	0.50	0.50	0.50	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................AGGGGTTTTTTTTGTTTTTTTT........................................................	22	7	0.29	0.29	0.29	-	-	-	-	-	-	-	-	-	-

ATGGCATAGAAGAAAATTTTTTTATGAAGCAAGTATAATATTGATGTTAAACTATGACAATGCACAAATATAAAAATTGTAGATGAATTTACTTATTATACTGACACAAAAATCCTAAATAAAACATTGCAAACAGATTCTAGCACAGATTAAAAAACACCCATTAAGATCAAGGGGTTTTTTTTGTTTTTTTTTTCTAGAAAACCCTTTGGAAGTTCATGATATTTTGAATTTCAATGGATATTTCCTG
....................................................................(((((.....(((((....)))))...))))).....................................((((((...(((.(((((((.((((.((......)).)))).)))))))....)))...))))))................................................
....................................................................69.......................................................................................................................................206..........................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)

SRR390723(GSM850202)
total small RNA. (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189784

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR189785

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTTTGG................................................

3.00

0.00

3.00

0.00

3.00

........................................................................................................................................................................ATCAAGGGGTTTTTTTTGTTTTTTTCTTC.....................................................

2.00

0.00

2.00

.........................................................................AAATTGTAGATGAATTTAA..............................................................................................................................................................

2.00

1.00

.........................................................................AAATTGTAGATGAATTT................................................................................................................................................................

2.00

0.50

1.50

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCGAC..................................................

2.00

0.00

2.00

.........................................................................................................................................................................TCAAGGGGTTTTTTTTGTTTTTTTTCTC.....................................................

2.00

0.00

2.00

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTAGGGC...............................................

2.00

0.00

2.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTTTCC................................................

1.00

0.00

1.00

......................................................................................................................................................................................TTTGTTTTTTTTTTCGGGT.................................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTAACTA...............................................

1.00

0.00

1.00

...................................................................................................................................................................................TTTTTTGTTTTTTTTTTCTCGG.................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTAGGG................................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTTC..................................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCGGAG.................................................

1.00

0.00

1.00

............................................................................................................................................................................AGGGGTTTTTTTTGTTTTTTTC........................................................

1.00

0.00

1.00

................................................................................................................................................................................GTTTTTTTTGTTTTTTTTTTCTTCCC................................................

1.00

0.00

1.00

............................................................................................................................................................................AGGGGTTTTTTTTGTTTTTTTGCC......................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTTGTT................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTATGG................................................

1.00

0.00

1.00

..............................................................................................................................................................................GGGTTTTTTTTGTTTCCC..........................................................

1.00

0.00

1.00

............................................................................................................................................................................AGGGGTTTTTTTTGTTTCCC..........................................................

1.00

0.00

1.00

............................................................................................................................................................................AGGGGTTTTTTTTGTTAGAA..........................................................

1.00

0.00

1.00

...................................................................................................................................................................................TTTTTTGTTTTTTTTTTCTAGAGCC..............................................

1.00

0.00

1.00

0.00

1.00

....................................................................................................................................................................................TTTTTGTTTTTTTTTTCGGC..................................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTGGTG................................................

1.00

0.00

1.00

.............................................................................................................................................................................GGGGTTTTTTTTGTTTTCAG.........................................................

1.00

0.00

1.00

.........................................................................AAATTGTAGATGAATTTAAACA...........................................................................................................................................................

1.00

......................................................................................................................................................................................TTTGTTTTTTTTTTCTACAGT...............................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTAAC.................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTCTTG................................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTGTTG................................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTTTTG................................................

1.00

0.00

1.00

...................................................................................................................................................................................TTTTTTGTTTTTTTTTTCTAGGGC...............................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCGTT..................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCGGAG.................................................

1.00

0.00

1.00

...........................................................................................................................................................................AAGGGGTTTTTTTTGTTTGTC..........................................................

1.00

0.00

1.00

..................................................................................................................................................................................TTTTTTTGTTTTTTTTTTCTCGG.................................................

1.00

0.00

1.00

....................................................................................................................................................................................TTTTTGTTTTTTTTTTCTAGACGG..............................................

1.00

0.00

1.00

.........................................................................AAATTGTAGATGAATTTAAA.............................................................................................................................................................

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCTAGGGC...............................................

1.00

0.00

1.00

....................................................................................................................................................................................TTTTTGTTTTTTTTTTCTAGTAT...............................................

1.00

0.00

1.00

................................................................................................................................................................................GTTTTTTTTGTTTTTTTTTTCGCC..................................................

1.00

0.00

1.00

................................................................................................................................................................................GTTTTTTTTGTTTTTTTTTCGAG...................................................

1.00

0.00

1.00

......................................................................................................................................................................................TTTGTTTTTTTTTTCTAGGGTG..............................................

1.00

0.00

1.00

...................................................................................................................................................................................TTTTTTGTTTTTTTTTTCGTA..................................................

1.00

0.00

1.00

.........................................................................AAATTGTAGATGAATTTA...............................................................................................................................................................

1.00

..............................................................................................................................................................................GGGTTTTTTTTGTTTCGC..........................................................

1.00

0.00

1.00

.....................................................................................................................................................................................TTTTGTTTTTTTTTTCGCG..................................................

1.00

0.00

1.00

.................................................................................................................................................................................TTTTTTTTGTTTTTTTTTTCAAC..................................................

1.00

0.00

1.00

............................................................................................................................................................................AGGGGTTTTTTTTGTTTGGGT.........................................................

1.00

0.00

1.00

..................................ATAATATTGATGTTAAACTATGACAA..............................................................................................................................................................................................

1.00

......................................................................................................................................................................................TTTGTTTTTTTTTTCGGC..................................................

1.00

0.00

1.00

....................................................................................................................................................................................TTTTTGTTTTTTTTTTCTAGGA................................................

1.00

0.00

1.00

..............................................................................................................................................................................GGGTTTTTTTTGTTTTTTTTTTC.....................................................

0.50

............................................................................................................................................................................AGGGGTTTTTTTTGTTTTTTTT........................................................

0.29