ID: uc003nzg.1_intron_4_0_chr6_32010384_r
GENE: TNXB(8)
chr6:32010334-32010525-


(5)
BREAST 		(5)
CELL-LINE 		(3)
CERVIX 		(3)
HEART 		(2)
HELA 		(1)
OTHER 		(39)
SKIN

Sense strand
CATGTGGGGCCAGAGCCTCCTGCCGCCCGTGTCCACCTCTTTCACCACGGGTACCTGGACGCACGGGCCCGGGGCCGGGGGCTGGGTGGGCAGCCAGGGCCTAAGGCTTGGAAAAGGACTGGCCCCTGCTCTCCTCTCCCAGGTGGGCTGCGGATCCCCTTCCCCAGGGACTGCGGGGAGGAGATGCAGAAC
.................................................................((((...))))(((((..(((.((((((...(((((..((.(((....)))..))))))))))))).))))))))....................................................
..........................................................59.................................................................................142................................................
SizePerfect hitTotal NormPerfect NormSRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040036(GSM532921)
G243N. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................................CCCCTGCTCTCCTCTCCCAGT.................................................21219.001.001.00--1.002.00-1.002.001.002.00---1.00---1.001.001.00--1.00-----1.00---------1.001.001.00-----------------
.....................................................................................................TAAGGCTTGGAAAAGGACTGG......................................................................21216.5016.501.00-0.500.500.501.000.500.50--0.50--0.50-1.00----1.001.00-0.50--1.00------0.50-1.000.50------0.50-0.500.500.50-0.50-0.500.500.50-0.50--
.................................................................................................................................................................CCCCAGGGACTGCGGGGAGGAGATGC.....2624.504.500.50------------0.50-0.50-0.50---0.50-----------0.50-------0.50------0.50-0.50-------
..........................................................................................................................CCCCTGCTCTCCTCTCCCAGA.................................................2123.001.00-1.00----1.00---1.00-----------------------------------------------
...............................................................CGGGCCCGGGGCCGGCGGG..............................................................................................................192.000.00-2.00--------------------------------------------------------
...............................................................CGGGCCCGGGGCCGGGCGC..............................................................................................................191.000.00--------------1.00-------------------------------------------
.................................................................................................................................................................CCCCAGGGACTGCGGGGAGGAGATG......2521.001.00------------------------0.50----------------0.50----------------
..........................................................................................................................CCCCTGCTCTCCTCTCCCAGTTA...............................................2321.001.00---------------------------1.00------------------------------
.ATGTGGGGCCAGAGCATGT............................................................................................................................................................................191.000.00------------1.00---------------------------------------------
..........................................................................................................................CCCCTGCTCTCCTCTCCCAGC.................................................2121.001.00---1.00------------------------------------------------------
.....................................................................................................TAAGGCTTGGAAAAGGACTGGTAT...................................................................2421.0016.50-------------------------------------1.00--------------------
.....................................................................CGGGGCCGGGGGCTGGGGC........................................................................................................191.000.00-----------1.00----------------------------------------------
.....................................................................................................TAAGGCTTGGAAAAGGACTGGA.....................................................................2221.0016.50--------1.00-------------------------------------------------
..........................................................................CCGGGGGCTGGGTGGGCAGCCAGGGCCAT.........................................................................................291.000.00----------------1.00-----------------------------------------
..........................................................................................................................CCCCTGCTCTCCTCTCCCAGAA................................................2221.001.00----------------------------------1.00-----------------------
..........................................................................................................................CCCCTGCTCTCCTCTCCCAG..................................................2021.001.00-------------------0.50--0.50-----------------------------------
...............................................................CGGGCCCGGGGCCGGGGGGC.............................................................................................................201.000.00--------------1.00-------------------------------------------
..........................................................................................................................CCCCTGCTCTCCTCTCCCAGTAAA..............................................2421.001.001.00---------------------------------------------------------
..........................................................................................................................CCCCTGCTCTCCTCTCCCAGTT................................................2221.001.00-----1.00----------------------------------------------------
.....................................................................................................TAAGGCTTGGAAAAGGACTGGTT....................................................................2321.0016.50-------------------------------1.00--------------------------
.....................................................................CGGGGCCGGGGGCTGGGTCGGT.....................................................................................................221.000.00-------------------------1.00--------------------------------
...........................................................................................................................................................CCCCTTCCCCAGGGACTGC..................1921.001.00------------------0.50----0.50----------------------------------
..................................................................................................................................................................CCCAGGGACTGCGGG...............1540.750.75------------------------------------------0.75---------------
.....................................................................................................................................................................AGGGACTGCGGGGAGGAGATG......2120.500.50------------------------------------------------------0.50---
..........................................................................CCGGGGGCTGGGTGGGCAGCCAGGGC............................................................................................2620.500.50---0.50------------------------------------------------------
..................................................................................................................................................................CCCAGGGACTGCGGGGAGGAG.........2120.500.50----------0.50-----------------------------------------------
...................................................................................................................................................................CCAGGGACTGCGGGGAGGAGATGCAGAAC2920.500.50-----0.50----------------------------------------------------
...........................................................................................................TTGGAAAAGGACTGGCCC...................................................................1820.500.500.50---------------------------------------------------------
........................................................................................................................................................................GACTGCGGGGAGGAGATGCAGAA.2320.500.50----------------0.50-----------------------------------------
..................CCTGCCGCCCGTGTCCACCTCTTTCACCACGG..............................................................................................................................................3220.500.50--------------------------------------------0.50-------------
..................................................................................................................................................................CCCAGGGACTGCGGGGAGGAGATG......2420.500.50------------------------------------0.50---------------------
....................................................................................................................................................................CAGGGACTGCGGGGAGGAGATGCAG...2520.500.50--------------------0.50-------------------------------------
......................................................................GGGGCCGGGGGCTGGGT.........................................................................................................1730.330.33--------------------------------------------------------0.33-
.....................................................CCTGGACGCACGGGC............................................................................................................................1540.250.25-----------------------0.25----------------------------------
.ATGTGGGGCCAGAGCCT..............................................................................................................................................................................1750.200.20---------------0.20------------------------------------------
.................................................................................................GGCCTAAGGCTTGGA................................................................................1560.170.17---------------------------------------------------------0.17

Antisense strand
CATGTGGGGCCAGAGCCTCCTGCCGCCCGTGTCCACCTCTTTCACCACGGGTACCTGGACGCACGGGCCCGGGGCCGGGGGCTGGGTGGGCAGCCAGGGCCTAAGGCTTGGAAAAGGACTGGCCCCTGCTCTCCTCTCCCAGGTGGGCTGCGGATCCCCTTCCCCAGGGACTGCGGGGAGGAGATGCAGAAC
.................................................................((((...))))(((((..(((.((((((...(((((..((.(((....)))..))))))))))))).))))))))....................................................
..........................................................59.................................................................................142................................................
SizePerfect hitTotal NormPerfect NormSRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040036(GSM532921)
G243N. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................GGGCCCGGGGCCGGGGGCTTGGG......................................................................................................... 231.000.00-----------------------------1.00----------------------------
..............GCCTCCTGCCGCCCGTGTCCACCTCTC....................................................................................................................................................... 271.000.00-----------1.00----------------------------------------------
.................................................................GGCCCGGGGCCGGGGGAGT............................................................................................................ 191.000.00--1.00-------------------------------------------------------
..............GCCTCCTGCCGCCCGCC................................................................................................................................................................. 171.000.00--1.00-------------------------------------------------------
...........AGAGCCTCCTGCCGCCCTAC................................................................................................................................................................. 201.000.00--------------------------------1.00-------------------------
...............................................................CGGGCCCGGGGCCGGGAA............................................................................................................... 181.000.00------------------------------1.00---------------------------
...............CCTCCTGCCGCCCGTATCG.............................................................................................................................................................. 191.000.00------------1.00---------------------------------------------
..............CACGGGCGGCAGGAGGC................................................................................................................................................................. 1720.500.50------------------------0.50---------------------------------
............CGGGCGGCAGGAGGCTC................................................................................................................................................................... 1720.500.50--0.50-------------------------------------------------------
............GGGCGGCAGGAGGCTC.................................................................................................................................................................... 1630.330.33----0.33-----------------------------------------------------