ID: uc003nyl.1_intron_6_0_chr6_31924616_r.3p
GENE: (1)
chr6:31924566-31924815-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(5)
AGO2.ip 		(8)
B-CELL 		(7)
BRAIN 		(15)
BREAST 		(45)
CELL-LINE 		(7)
CERVIX 		(1)
FIBROBLAST 		(7)
HEART 		(10)
HELA 		(8)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(35)
SKIN 		(1)
TESTES 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
ACCTCTCTCTTCTCACCCTTGTTCCCAGAAAAAGGCATTGCTGGCTCTGAAGAAGCAAAGTAGCAGCAGCACAACCAGCCAAGGTGGTGTCAAACGCTGTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAGCACTATCAGAGCAGCCTGTCATGGACACAGCCACAGCAACAGAGCAGGCA
................................................................................................(((.(((.((((((((((..((.(((((.........(((((((.....)))).)))))))).((((...))))........))..))))))).))).))))))..................................................
..............................................................................................95.......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR553576(SRX182782)
source: Testis. (testes)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189786SRR189787SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189783SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR040028(GSM532913)
G026N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR038861(GSM458544)
MM466. (cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532889(GSM532889)
G576N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR038858(GSM458541)
MEL202. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR040038(GSM532923)
G531N. (cervix)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
...................................................................................................TGAGTGACAGGGGAAATGGGGA.................................................................................................................................22152.0052.0041.00---5.00------2.00------------------------------2.00-------------------------1.00----------------------------------------1.00-----------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGG....................................................................................................................................20141.0041.00--4.00-1.00-----2.001.0011.0010.00-------1.00--2.00---1.00-----1.001.001.00------------------------1.00-----------------1.00--------------1.00------------1.00--------------------1.00----------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCAGT.................................................21129.008.005.00-3.00--4.00---2.00-1.00--------2.00-1.00--------3.00-----------2.00--------1.00-------------1.00-----------------------------------1.00-----------1.00------------------------------1.00----1.00------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCAGA.................................................21128.008.001.00-2.00-1.006.00---1.00-1.00----------3.00---2.00-----1.00-------1.00---------1.001.00-1.001.00------------1.00--------------------1.00-----------1.00----------------------------1.00-----------------1.00---------
...................................................................................................TGAGTGACAGGGGAAATGGGGAT................................................................................................................................23120.0020.0015.00---1.00------1.00--------------------------------------------1.00-----------------------------------------------------------1.00------------------------1.00---------------
..................................................................................................GTGAGTGACAGGGGAAATGGG...................................................................................................................................21120.0020.00--11.00-------------1.00--------------------------------------1.00--2.00-----------1.00-1.00----------1.00--------------------1.00----------------------------------1.00-----------------
..................................................................................................GTGAGTGACAGGGGAAATGGGG..................................................................................................................................22119.0019.001.00------15.00---1.00---------1.00-----------------------1.00---------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGG..................................................................................................................................21116.0016.005.00---4.00------1.00-1.00-----4.00--------1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGACGG..............................................................................................................................25116.0052.00--------9.007.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGG...................................................................................................................................20115.0015.005.00--2.004.00------1.00----------------1.00----------------1.00----------------------------------------------------------------------------------------1.00----------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGAA................................................................................................................................23112.0052.008.00--1.00-------1.00---------------------------------------------------------------------------------------1.00----------------------------------------1.00----------------
...............................AAGGCATTGCTGGCTCTGAAGAAGCAAAGTAGCAGCAGCACAACCAGCCAAGGTGGTGTCAAACGC.........................................................................................................................................................66110.0010.00-10.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGA..................................................................................................................................2219.0020.00--4.00-1.00---------------2.00-------------------------------------------------------------------------------------------1.00---------------------------------1.00----------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTC.........................................................9519.009.00-8.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
.......................................................................................................................GATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCT.....................................................................6219.009.00-9.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGC..................................................................................7018.008.00-8.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCAG..................................................2018.008.00-----7.00---------------------------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGA.................................................................................................................................2318.008.003.00---1.001.00---------1.00-----------------1.00-------------------------------------------------------------------------------------------------------------------1.00-------
...................................................................................................TGAGTGACAGGGGAAATGG....................................................................................................................................1918.008.00----------------------------1.00-------1.00--------------1.00-1.001.00------1.00-----------------------1.00-------1.00---------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGACG...............................................................................................................................2418.0052.00--------4.003.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATG.....................................................................................................................................1817.007.00---2.00------1.00----1.00-----1.00--------------------------1.00----------------------------------------------------------------------------------------1.00-------------------
.........................................................................................................................TGGACTGGAAGTGGGCAGC..............................................................................................................1917.007.00---6.00-------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
.............................................................................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGG..2716.006.00------4.00-------------------------------------------------------------------------------------------1.00----------------------------------1.00-----------------------
..................................................................................................................................................................................CCTCTTCCCCTTGTCTCTCCAGA.................................................2315.003.00-----------------------------------------------------------1.00----------------1.001.00------------------------------1.00---------------1.00--------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCT........................................................9615.005.00-5.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................GGGATGGACTGGAAGTGGGCA................................................................................................................2115.005.00-------------------------4.00-----------------------------------------------------------------------------------------------1.00-----------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGA....................................................................................................................................2015.003.00--3.00-------1.00-----------------------------------------------------------------------------------------------------------------------------1.00--------------------
...............................AAGGCATTGCTGGCTCTGAAG......................................................................................................................................................................................................2115.005.005.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATAAT.............................................................................................................................2614.0020.004.00------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGG..............................................................................................................................2614.004.00-----------------1.00---------------------------------------2.00-----------------1.00---------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAACG.....................................................................................................................................184.000.00---------------4.00---------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTCTTCCCCTTGTCTCTCCAGT.................................................2314.003.00-----------------------2.00-------------------------------------------------------------------------1.00----------------------------------------------1.00------------
...................................................................................................TGAGTGACAGGGGAAAT......................................................................................................................................1714.004.004.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGA....................................................................................................................................1913.007.00---------------------------------------------------------------2.00--------------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGAGCAGCCTGTCATGGACACA.....................2213.003.00------------------1.00--------------2.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGAA..................................................................................................................................2113.008.00---3.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATAAT...................................................................................................................................2113.003.00-----------------------------3.00-------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTCTTCCCCTTGTCTCTCCAG..................................................2213.003.00--------------3.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGA..................................................................................................................................2113.0015.00--1.00--------1.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATT...............................................................................................................................2513.002.003.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATT...............................................................................................................................2413.0020.00----------2.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATG.....................................................................................................................................1913.003.00----------2.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCTTCCCCTTGTCTCTCCAGT.................................................223.000.00--------------------1.00-----------------------2.00----------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGAAA...............................................................................................................................2413.0052.00--------3.00----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCTTCCCCTTGTCTCTCCAGA.................................................223.000.00----------------------1.00--------------------------1.00-------------------------------------------------------------------1.00---------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATG...............................................................................................................................2513.003.003.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................GAAAAAGGCATTGCTGGCT............................................................................................................................................................................................................1913.003.00------------------3.00------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATA...............................................................................................................................2413.0020.00---2.00-----------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAAT......................................................................................................................................1813.003.00-----------------------------------------------------------------------------------------1.00---------------------1.00-----------1.00---------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATGGA.............................................................................................................................2612.002.00----1.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..............................AAAGGCATTGCTGGCTCTGAAGAAGCA.................................................................................................................................................................................................2712.002.00------------------------------1.00----------------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGT..................................................................................................................................2212.0020.00-------1.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.........................................TGGCTCTGAAGAAGCAAAGTAGCAGCAGC....................................................................................................................................................................................2912.002.00------1.00-------------------------------------------------------------------------------------1.00----------------------------------------------------------------
...............................AAGGCATTGCTGGCTCTGAAGAAG...................................................................................................................................................................................................2412.002.00--------------------------------------------------------------2.00----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGCAGCCTGTCATGGACACA.....................2012.002.00-----------------------------------1.00----------1.00--------------------------------------------------------------------------------------------------------------
...........................................................................................................................GACTGGAAGTGGGCAGCATGGAGCTG.....................................................................................................2612.002.00----------2.00--------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATA.....................................................................................................................................1812.004.00---2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................AAGGCATTGCTGGCTCTGAAGAAGCA.................................................................................................................................................................................................2612.002.00-------------------------------------------------------------------------1.001.00----------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATCA..............................................................................................................................2512.0020.002.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.......TCTTCTCACCCTTGTTCCCAG..............................................................................................................................................................................................................................2112.002.00--------------------------------------2.00----------------------------------------------------------------------------------------------------------------------
...........................GAAAAAGGCATTGCTGGCTCTGAAGAAGCAAAGTAGCAGCAGCACAACCAGCCAAGGTGGTGTCAAACGCT........................................................................................................................................................7112.002.00-------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................GGATGGACTGGAAGTGGGCA................................................................................................................2012.002.00------------------------2.00------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGAT................................................................................................................................2412.002.00----1.00-------------------------------------------------------------------------------------------1.00------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATG...............................................................................................................................2412.002.00-----1.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATA.....................................................................................................................................1912.003.00--------------------------------2.00----------------------------------------------------------------------------------------------------------------------------
.............................AAAAGGCATTGCTGGCTCTGAAGAAGCA.................................................................................................................................................................................................2812.002.00----------------1.00-------------1.00------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGT..................................................................................................................................2112.0015.00---1.00-------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTTCCCCTTGTCTCTCCAT..................................................192.000.00---------------1.00-------------------------------------------------------------------------------------------------1.00-------------------------------------------
.............................AAAAGGCATTGCTGGCTCTGAAG......................................................................................................................................................................................................2312.002.002.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGAAT...............................................................................................................................2412.0052.00---1.00--------------------------------1.00------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TGGACTGGAAGTGGGCAG...............................................................................................................1821.501.50----------------------------------------------------------------------------------------------------------------------------------------------1.00----------0.50---
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCAGTA................................................2211.008.00---------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................................AGAGCAGCCTGTCATGGACACAG....................2311.001.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................GGGATGGACTGGAAGTGGGC.................................................................................................................2011.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...........................GAAAAAGGCATTGCTGGCTCTGAAGAAG...................................................................................................................................................................................................2811.001.00---------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................GGGATGGACTGGAAGTGGGCAGCA.............................................................................................................2411.001.00------------------------------------------------------------------------------------------1.00------------------------------------------------------------------
............................................................................................................................................................................................................................ATGGACACAGCCACAGCAACAGAGCAGGCCA311.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..............................AAAGGCATTGCTGGCTCTGAAGAAGC..................................................................................................................................................................................................2611.001.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................AAAGGCATTGCTGGCTCTGAAGAA....................................................................................................................................................................................................2411.001.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGGC.2811.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCATA.................................................211.000.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
.............................................TCTGAAGAAGCAAAGTAGCAGCAGCACA.................................................................................................................................................................................2811.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGGAC............................................................................................................................2811.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
................................AGGCATTGCTGGCTCTGAAGA.....................................................................................................................................................................................................2111.001.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
................................AGGCATTGCTGGCTCTGAAGAAGCAAAGT.............................................................................................................................................................................................2911.001.00--------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCAT..................................................201.000.00----------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
................................................GAAGAAGCAAAGTAGCA.........................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------------------------------------------------------------1.00------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGA........................................................................................................................3211.001.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TGGACTGGAAGTGGGTGG...............................................................................................................181.000.00--------------------------------------------------------------------------------------------------------------1.00----------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAG..................................................10111.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCTTCCCCTTGTCTCTCCATT.................................................221.000.00-------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
........................................................................................................................................................................................CCCCTTGTCTCTCCAGTT................................................181.000.00----------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
......................................................................................................................GGATGGACTGGAAGTGGGCAGCATGGAGCTGACC..................................................................................................3411.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGTAA..................................................................................................................................2111.007.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................ATGGACTGGAAGTGGGCAGCATTT..........................................................................................................241.000.00---------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCAGTTT...............................................2311.008.00----------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
.........................................................................................................................TGGACTGGAAGTGGGCAGCA.............................................................................................................2011.001.00----------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................TGGACACAGCCACAGCAACAGATTAG...261.000.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGAT.................................................................................................................................2311.0020.00-------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
.............................................................................................................................................................................TAATGCCTCTTCCCCTTGTCTCTCCAG..................................................2711.001.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
............................AAAAAGGCATTGCTGGCTCTGAAGAAGC..................................................................................................................................................................................................2811.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGAAA...............................................................................................................................2511.008.00--------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCAGTAT...............................................2311.008.00-------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..........................AGAAAAAGGCATTGCTGGCTCTGAAGAAGC..................................................................................................................................................................................................3011.001.00-------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................GGATGGACTGGAAGTGGGCAGCATGGAGCTG.....................................................................................................3111.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................ACAGGGGAAATGGGGATGGA.............................................................................................................................2011.001.00-----------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
.......................................GCTGGCTCTGAAGAAGCAAAGTAGC..........................................................................................................................................................................................2511.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GATGGACTGGAAGTGGGCAGCA.............................................................................................................2211.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
..............................AAAGGCATTGCTGGCTCTGAAGAAGCAAAGT.............................................................................................................................................................................................3111.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGAA.................................................................................................................................2211.0015.00--------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCTTCCCCTTGTCTCTCCCGA.................................................221.000.00------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CATGGACACAGCCACAGCAACAGAGCAG...2811.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GGGGATGGACTGGAAGTG....................................................................................................................1811.001.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................AATGCCTCTTCCCCTTGTCTCTC.....................................................2311.001.00-------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.....................................................................................................................................................................................CTTCCCCTTGTCTCTCCAGT.................................................201.000.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
................................AGGCATTGCTGGCTCTGAAGAAGCAAAGTAGC..........................................................................................................................................................................................3211.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................ACTATCAGAGCAGCCTGTCATGGAC........................2511.001.00-------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
...............................AAGGCATTGCTGGCTCTGAAGA.....................................................................................................................................................................................................2211.001.00------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
....................................ATTGCTGGCTCTGAAGAAGC..................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------------------------------1.00------------------------------------
.............................................................................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGT..271.000.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGGACTGG.........................................................................................................................3111.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCTTCCCCTTGTCTCTCCAGTA................................................231.000.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
...........................GAAAAAGGCATTGCTGGCTCTGAAG......................................................................................................................................................................................................2511.001.00------------------------------------------------------------------------------------------------------------------------------------------1.00------------------
...................................................GAAGCAAAGTAGCAGCAGCACAACC..............................................................................................................................................................................2511.001.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................ACATAATGCCTCTTCCCCTTGT..........................................................2211.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...............................AAGGCATTGCTGGCTCTGAAGAAGCAAA...............................................................................................................................................................................................2811.001.00---------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
...............................................TGAAGAAGCAAAGTAGC..........................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGT.................................................................................................................................2311.0019.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
...............................................TGAAGAAGCAAAGTAGCAGCAGCA...................................................................................................................................................................................2411.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGGA.............................................................................................................................2711.001.00----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGAA................................................................................................................................2411.008.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........................GAAAAAGGCATTGCTGGCTCTGAA.......................................................................................................................................................................................................2411.001.00----------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................ATGGGGATGGACTGGAAGGGG...................................................................................................................211.000.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................TGAAGAAGCAAAGTAGCAGCAGCACAACC..............................................................................................................................................................................2911.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGAGGG..............................................................................................................................2611.008.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATGG..............................................................................................................................2511.001.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.............................AAAAGGCATTGCTGGCTCTGAAGAAGCAAAGT.............................................................................................................................................................................................3211.001.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
...........................GAAAAAGGCATTGCTGGCTCTGAAGAAGC..................................................................................................................................................................................................2911.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................TGGACTGGAAGTGGGCAGCATGGAGCT......................................................................................................2711.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CTATCAGAGCAGCCTGTCAT............................2011.001.00-------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
..................................GCATTGCTGGCTCTGAGGTA....................................................................................................................................................................................................201.000.00---------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCCGTT................................................2221.001.00-----------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGTAA.................................................................................................................................2211.008.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTC.....................................................9911.001.00------------------------------------------------------------------------------------------------------------------------------1.00------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGGATTT..............................................................................................................................2511.0020.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
................................AGGCATTGCTGGCTCTGAAGAAGCA.................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
.........................................................................................................................TGGACTGGAAGTGGGCAGCATGGAG........................................................................................................2511.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCCAGC.................................................2111.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GATGGACTGGAAGTGGGCAGC..............................................................................................................2111.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTTCCCCTTGTCTCTCC....................................................1821.001.00--0.50-----------------------------------------------------------------------------------------------------------------------------------------------------0.50----
.................................................................GCAGCACAACCAGCCAAGGTGGTGTCAAACGCT........................................................................................................................................................3311.001.00--------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
.................................GGCATTGCTGGCTCTGAAGAAGC..................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
..................................GCATTGCTGGCTCTGAAGAAGCAAAGTAGC..........................................................................................................................................................................................3011.001.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.........................................TGGCTCTGAAGAAGCAAAGTAGCAG........................................................................................................................................................................................2511.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TCATGGACACAGCCACAGCAACAGAGCAG...2911.001.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
........................................................................................GTCAAACGCTGTGAGTGAC...............................................................................................................................................1911.001.00--------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
..................................................................................................GTGAGTGACAGGGGAAATGGGTT.................................................................................................................................2311.0020.00-----------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
......................................TGCTGGCTCTGAAGAAGCAAAGTAG...........................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
....................................................................................................GAGTGACAGGGGAAATGGGGAT................................................................................................................................2211.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
......................................TGCTGGCTCTGAAGAAGCAAAGTAGC..........................................................................................................................................................................................2611.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................GAGTGACAGGGGAAATGGGGA.................................................................................................................................2111.001.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTCTTCCCCTTGTCTCTCCA...................................................2111.001.00--------------------------------------------------------------------------------------------------------------------------1.00----------------------------------
.........................................TGGCTCTGAAGAAGCAAAGTAGCAGCAGCACA.................................................................................................................................................................................3211.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TGAGTGACAGGGGAAATGGGAAG................................................................................................................................2311.0015.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...........................GAAAAAGGCATTGCTGGCTCTGAAGAA....................................................................................................................................................................................................2711.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................TCTGAAGAAGCAAAGTAGCAGCAGCAC..................................................................................................................................................................................2711.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..............................AAAGGCATTGCTGGCTCT..........................................................................................................................................................................................................1820.500.50----------------------------------------------------------------------0.50--------------------------------------------------------------------------------------
..................................................................................................................ATGGGGATGGACTGGAA.......................................................................................................................1750.400.40----------------0.20------------------------------------------------------------------------------------------------------------------------------------------0.20-
......................................................................................................................GGATGGACTGGAAGTGG...................................................................................................................1730.330.33------------------------------------------------------------------------0.33------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TCATGGACACAGCCAC................1630.330.33-----------------------------------------------------------------------0.33-------------------------------------------------------------------------------------
.....................................TTGCTGGCTCTGAAGAAG...................................................................................................................................................................................................1870.290.29----------------0.14--------------------------------------------------------0.14-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................CAGCAACAGAGCAGGC.1680.120.12--------------------------------------------------------------------------0.12----------------------------------------------------------------------------------

Antisense strand
ACCTCTCTCTTCTCACCCTTGTTCCCAGAAAAAGGCATTGCTGGCTCTGAAGAAGCAAAGTAGCAGCAGCACAACCAGCCAAGGTGGTGTCAAACGCTGTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAGCACTATCAGAGCAGCCTGTCATGGACACAGCCACAGCAACAGAGCAGGCA
................................................................................................(((.(((.((((((((((..((.(((((.........(((((((.....)))).)))))))).((((...))))........))..))))))).))).))))))..................................................
..............................................................................................95.......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR553576(SRX182782)
source: Testis. (testes)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189786SRR189787SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189783SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR040028(GSM532913)
G026N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR038861(GSM458544)
MM466. (cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532889(GSM532889)
G576N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR038858(GSM458541)
MEL202. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR040038(GSM532923)
G531N. (cervix)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
....CTCTCTTCTCACCCTTGATA.................................................................................................................................................................................................................................. 201.000.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................AGTGCTGGAGAGACAAGGGGAAG.............................................. 2311.001.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CCAACATAATGCCTCTG.................................................................. 171.000.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CAGCCTGTCATGGACACAGCGT................. 221.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................ATAGTGCTGGAGAGACAAGGGG............................................ 2211.001.00---------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................ACCTTCATCATGGCTGAC................................................................................... 181.000.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
..TCTGGGAACAAGGGTGAGAAGAGAGAG............................................................................................................................................................................................................................. 2711.001.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGCTGTGGCTGTGTC........... 1640.250.25----------------------------------------------------------------------------------------------------------------------------------------------------------0.25--
..................................................................................................................................................................................................................................CTGTTGCTGTGGCTGT........ 1670.140.14------------------------------------------------------------------------------------------------------------------------------------------------------------0.14