ID: uc003nwp.2_intron_2_0_chr6_31696070_r
GENE: (3)
chr6:31696020-31696277-


(2)
AGO1.ip
(2)
AGO2.ip
(9)
B-CELL
(4)
BRAIN
(9)
BREAST
(28)
CELL-LINE
(15)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(1)
KIDNEY
(10)
LIVER
(2)
OTHER
(31)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
CCAAATGGACCAATCACCGAGGAGCTGAGATCGTGGCGGACACGTTCCGGGTGCGGAGCGGGACCAGCCTAGGGAGGGAGGGGGTGCAGGTGGGGGTCGGAAGGGCCTGGGCGCCCGCTGAGGAAATGAGAGGCAGAGAGCAGCCTATGTTTGAAGATACCCCATCACCCCTCCCGCGCCCCTGAATACCTCCCTTCGCTCTCCCTAGGACTTCGCCGTCTCCACTGTGCCAGTCTCGGGTCCCTCCCACCTGCGCGG
.........................................................................................................................((...((.((((....(((((.....)))))...(((.....)))...)))).))..))..............................................................................
.........................................................................................................................122.................................................................190..................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040015(GSM532900)
G623T. (cervix)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040018(GSM532903)
G701N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189787SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR343335SRR038857(GSM458540)
D20. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR029129(GSM416758)
SW480. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR038855(GSM458538)
D10. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
TAX577741(Rovira)
total RNA. (breast)
GSM532884(GSM532884)
G871T. (cervix)
SRR040022(GSM532907)
G575N. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR040033(GSM532918)
G603T. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR040032(GSM532917)
G603N. (cervix)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532887(GSM532887)
G761N. (cervix)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR040043(GSM532928)
G428T. (cervix)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..............................................................................................................................TGAGAGGCAGAGAGCGAGA.................................................................................................................1964.000.00-4.00-5.001.002.00--3.00--1.001.001.00--2.00-1.002.00--1.00--1.001.001.001.002.00--2.00--1.001.00--1.00-2.00---1.00-----------1.00----1.00-1.00---1.001.00---1.00-----1.001.001.001.00-1.00---1.001.001.00--1.00----1.001.00--1.001.001.00-1.00-1.00--1.001.00-1.001.00----
..............................................................................................................................TGAGAGGCAGAGAGCGAG..................................................................................................................1820.000.00--5.00--1.00-----2.00-1.00---------1.00------2.00---2.00----1.00----------1.00---------------1.00----------------------------1.00----1.00------------1.00------
................................GTGGCGGACACGTTCCGG................................................................................................................................................................................................................1816.006.00---------------2.00---------------------1.00------1.00--1.00---------------------------1.00--------------------------------------------
..............................................................................................................................TGAGAGGCAGAGAGCGA...................................................................................................................174.000.00---------------------------1.00---------------------------1.00-----1.00-------------------------1.00--------------------------------
..............................................................................................................................TGAGAGGCAGAGAGCGAAA.................................................................................................................194.000.00----------3.00--------------1.00----------------------------------------------------------------------------------------------
..................GAGGAGCTGAGATCGTGGCGGA..........................................................................................................................................................................................................................2214.004.00-------1.00----------------1.00-------------1.00-------------------------------1.00-------------------------------------------------
..............................................................................................................................TGAGAGGCAGAGAGCGAGT.................................................................................................................193.000.00-----------------1.00---------------1.00---------------------------------------------------------------1.00----------------------
...................AGGAGCTGAGATCGTGGCGGAC.........................................................................................................................................................................................................................2213.003.00------------1.00-----------1.00-------------------------------------------------------------------------------------1.00---------
...................AGGAGCTGAGATCGTGGCGGA..........................................................................................................................................................................................................................2113.003.00---------------------1.00---------1.00-----------------------------------------------------------1.00----------------------------
......................AGCTGAGATCGTGGCGGACACGTTCCGG................................................................................................................................................................................................................2812.002.00----------------------------1.00-----------1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................CCCCTCCCGCGCCCCGCGC........................................................................192.000.00----2.00-------------------------------------------------------------------------------------------------------------------
...............ACCGAGGAGCTGAGATCGTGGCGGA..........................................................................................................................................................................................................................2512.002.00-----------------------------------------------------------------------------------1.00--------------------------------1.00---
......................AGCTGAGATCGTGGCGGAC.........................................................................................................................................................................................................................1912.002.00---------1.00---------------------------1.00----------------------------------------------------------------------------------
..................GAGGAGCTGAGATCGTGGCGGACA........................................................................................................................................................................................................................2412.002.001.00----------------------------------------------------------------------------------------------------------1.00------------
..............CACCGAGGAGCTGAGATCGT................................................................................................................................................................................................................................2012.002.00----2.00-------------------------------------------------------------------------------------------------------------------
..............................................................................................................................TGAGAGGCAGAGAGCGTG..................................................................................................................182.000.00---------------------------------------------------1.00-----------------------------------------------------1.00--------------
....ATGGACCAATCACCGAGGAGC.........................................................................................................................................................................................................................................2111.001.00------1.00-----------------------------------------------------------------------------------------------------------------
...................AGGAGCTGAGATCGTGGCG............................................................................................................................................................................................................................1911.001.00-----------------------1.00------------------------------------------------------------------------------------------------
........................................................................GGAGGGAGGGGGTGCTATG.......................................................................................................................................................................191.000.00-----1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................TGAGAGGCAGAGAGCAGCCTTT..............................................................................................................221.000.00------------------------------------------------------------------------------------------------1.00-----------------------
.......GACCAATCACCGAGGAGCTGAGATC..................................................................................................................................................................................................................................2511.001.001.00-----------------------------------------------------------------------------------------------------------------------
.CAAATGGACCAATCACCGAGGAG..........................................................................................................................................................................................................................................2311.001.00------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................GTCGGAAGGGCCTGGGGCT................................................................................................................................................191.000.00------------------------------------------------------1.00-----------------------------------------------------------------
.....TGGACCAATCACCGAGGAGCTG.......................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------1.00-------------------------------------------
........................................................................................................................AGGAAATGAGAGGCAGAAT.......................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CTTCGCCGTCTCCACTGTTC............................201.000.00---------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................GAAGGGCCTGGGCGCCAAA............................................................................................................................................191.000.00--------------1.00---------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................CCTCCCTTCGCTCTCACC....................................................181.000.00--------------------------------------------------------------------------------------------1.00---------------------------
.................................................................................................................................................................................GCCCCTGAATACCTCCCTTCGCTCTCCCT....................................................2911.001.00----------------------------------------------------1.00-------------------------------------------------------------------
..............................................CCGGGTGCGGAGCGGG....................................................................................................................................................................................................1611.001.00---------------------------------------------------------------1.00--------------------------------------------------------
..............................................................................................................................TGAGAGGCAGAGAGCGAT..................................................................................................................181.000.00-------------1.00----------------------------------------------------------------------------------------------------------
...............ACCGAGGAGCTGAGATCGTGGC.............................................................................................................................................................................................................................2211.001.00--------------------1.00---------------------------------------------------------------------------------------------------
................CCGAGGAGCTGAGATCGTGGCGGACA........................................................................................................................................................................................................................2611.001.00--------------------------------------1.00---------------------------------------------------------------------------------
....................GGAGCTGAGATCGTGGCGGACACGTTCCGG................................................................................................................................................................................................................3011.001.00----------------------------------------------1.00-------------------------------------------------------------------------
.............TCACCGAGGAGCTGAGATCGTG...............................................................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------1.00------------------------------------------------
...AATGGACCAATCACCGAGGAGCTAA......................................................................................................................................................................................................................................251.000.00------------------------------------1.00-----------------------------------------------------------------------------------
.........................TGAGATCGTGGCGGACACG......................................................................................................................................................................................................................1911.001.00-------------------------------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCCCTTCGCTCTCCCTAGGACTTCGCC.........................................2711.001.00-----------------------------------------------------------------------------------------------------1.00------------------
......................AGCTGAGATCGTGGCGGACA........................................................................................................................................................................................................................2011.001.00---------1.00--------------------------------------------------------------------------------------------------------------
......................AGCTGAGATCGTGGCGGACACGTTCCCG................................................................................................................................................................................................................281.000.00-----------------------------------1.00------------------------------------------------------------------------------------
...................................................................................................................CGCTGAGGAAATGAGAGGCAGAGAGCAG...................................................................................................................2811.001.00-------------------------------------------------------------------1.00----------------------------------------------------
.......................GCTGAGATCGTGGCGGACACGTTCCGG................................................................................................................................................................................................................2711.001.00-----------------------------------------------------------------1.00------------------------------------------------------
...................AGGAGCTGAGATCGTGGCGGACACGT.....................................................................................................................................................................................................................2611.001.00---------------------------------1.00--------------------------------------------------------------------------------------
....ATGGACCAATCACCGAGGAGCTGAGATCGTGGC.............................................................................................................................................................................................................................3311.001.00-----------------------------------------------------------1.00------------------------------------------------------------
............ATCACCGAGGAGCTGAGATCGTGGCGGAC.........................................................................................................................................................................................................................2911.001.001.00-----------------------------------------------------------------------------------------------------------------------
..AAATGGACCAATCACCGAGGAG..........................................................................................................................................................................................................................................2211.001.00------------------------------------------1.00-----------------------------------------------------------------------------
..............................................................................................................................TGAGAGGCAGAGAGCGTGA.................................................................................................................191.000.00--------------------------------------------------------------------------------------1.00---------------------------------
............ATCACCGAGGAGCTGAGATCGTGGCGGACA........................................................................................................................................................................................................................3011.001.001.00-----------------------------------------------------------------------------------------------------------------------
........................CTGAGATCGTGGCGGACACG......................................................................................................................................................................................................................2011.001.00--------------1.00---------------------------------------------------------------------------------------------------------
.................CGAGGAGCTGAGATCGTGGCGGAC.........................................................................................................................................................................................................................2411.001.00--------------------1.00---------------------------------------------------------------------------------------------------
..................GAGGAGCTGAGATCGTGGCGGAC.........................................................................................................................................................................................................................2311.001.00---------------------1.00--------------------------------------------------------------------------------------------------
...AATGGACCAATCACCGAGGAGCTG.......................................................................................................................................................................................................................................2411.001.00------------------------------------------1.00-----------------------------------------------------------------------------
.....TGGACCAATCACCGAGGAGCTGA......................................................................................................................................................................................................................................2311.001.00----------------------------------------1.00-------------------------------------------------------------------------------
............ATCACCGAGGAGCTGAGATCGTGGCGGA..........................................................................................................................................................................................................................2811.001.001.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................ACCCCTCCCGCGCCCCC...........................................................................171.000.00---------------------------------------------------------------------------------------------------------------------1.00--
.............TCACCGAGGAGCTGAGA....................................................................................................................................................................................................................................1711.001.00-------------------------------------------1.00----------------------------------------------------------------------------
...AATGGACCAATCACCGAGGAGC.........................................................................................................................................................................................................................................2211.001.00------1.00-----------------------------------------------------------------------------------------------------------------
................................GTGGCGGACACGTTCCGC................................................................................................................................................................................................................181.000.00----------------------------------------------------------------------------------------------1.00-------------------------
..............CACCGAGGAGCTGAGATCGTGGCGGAC.........................................................................................................................................................................................................................2711.001.00----------------------------------------------------------1.00-------------------------------------------------------------
..............................................................................................................................TGAGAGGCAGAGAGCCTTT.................................................................................................................191.000.00----------------------1.00-------------------------------------------------------------------------------------------------
...........AATCACCGAGGAGCTGAGATCGTGGCGGA..........................................................................................................................................................................................................................2911.001.00-------1.00----------------------------------------------------------------------------------------------------------------
.CAAATGGACCAATCACCGAGGAGCTG.......................................................................................................................................................................................................................................2611.001.00-----------------------------------------------------------------------------1.00------------------------------------------
..................GAGGAGCTGAGATCGTGGCGGCCAC.......................................................................................................................................................................................................................251.000.00--------------------------------------------------------1.00---------------------------------------------------------------
...................AGGAGCTGAGATCGTGGCGGACAC.......................................................................................................................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------------------
.......................GCTGAGATCGTGGCGGAC.........................................................................................................................................................................................................................1811.001.00-----------------------------------------------------1.00------------------------------------------------------------------
..................GAGGAGCTGAGATCGTGGCGGGC.........................................................................................................................................................................................................................231.000.00-------1.00----------------------------------------------------------------------------------------------------------------
...................AGGAGCTGAGATCGTGGCGGACA........................................................................................................................................................................................................................2311.001.001.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ACTGTGCCAGTCTCGGGTCCCTC............2311.001.00------------------------------------------------------------------------1.00-----------------------------------------------
..................GAGGAGCTGAGATCGTGGC.............................................................................................................................................................................................................................1911.001.00------------------------------------------------------------1.00-----------------------------------------------------------
................CCGAGGAGCTGAGATCGTGG..............................................................................................................................................................................................................................2011.001.00-------------------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................................................................................................TTCGCCGTCTCCACTGTGCCAGTCTCGG...................2811.001.00--------------------------1.00---------------------------------------------------------------------------------------------
...................AGGAGCTGAGATCGTGGCGGAAACG......................................................................................................................................................................................................................2511.003.00------------1.00-----------------------------------------------------------------------------------------------------------
.............TCACCGAGGAGCTGAGATCGTGGC.............................................................................................................................................................................................................................2411.001.00-------------------------------------------------------------------------------------------------------------1.00----------
.....TGGACCAATCACCGAGGAGCTA.......................................................................................................................................................................................................................................221.000.00--------------------------------------------1.00---------------------------------------------------------------------------
..........................................................................AGGGAGGGGGTGCAGGTCTTG...................................................................................................................................................................211.000.00-----------------1.00------------------------------------------------------------------------------------------------------
..................GAGGAGCTGAGATCGTGGCGGACAC.......................................................................................................................................................................................................................2511.001.001.00-----------------------------------------------------------------------------------------------------------------------
....................GGAGCTGAGATCGTGGCGGACACGTTC...................................................................................................................................................................................................................2711.001.00--------------------------------------------------------------------------1.00---------------------------------------------
...........AATCACCGAGGAGCTG.......................................................................................................................................................................................................................................1620.500.50----------------------------------------------------------------------------------------------------------------------0.50-
.......................................................................................................GGCCTGGGCGCCCGC............................................................................................................................................1590.110.11-----------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
CCAAATGGACCAATCACCGAGGAGCTGAGATCGTGGCGGACACGTTCCGGGTGCGGAGCGGGACCAGCCTAGGGAGGGAGGGGGTGCAGGTGGGGGTCGGAAGGGCCTGGGCGCCCGCTGAGGAAATGAGAGGCAGAGAGCAGCCTATGTTTGAAGATACCCCATCACCCCTCCCGCGCCCCTGAATACCTCCCTTCGCTCTCCCTAGGACTTCGCCGTCTCCACTGTGCCAGTCTCGGGTCCCTCCCACCTGCGCGG
.........................................................................................................................((...((.((((....(((((.....)))))...(((.....)))...)))).))..))..............................................................................
.........................................................................................................................122.................................................................190..................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040015(GSM532900)
G623T. (cervix)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040018(GSM532903)
G701N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189787SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR343335SRR038857(GSM458540)
D20. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR029129(GSM416758)
SW480. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR038855(GSM458538)
D10. (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
TAX577741(Rovira)
total RNA. (breast)
GSM532884(GSM532884)
G871T. (cervix)
SRR040022(GSM532907)
G575N. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR040033(GSM532918)
G603T. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR040032(GSM532917)
G603N. (cervix)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532887(GSM532887)
G761N. (cervix)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR040043(GSM532928)
G428T. (cervix)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
.......................................................................................................................................................................CCCCTCCCGCGCCCCGGGC........................................................................ 191.000.00-------------------------------------------1.00----------------------------------------------------------------------------
................................................................................................................................................................................................................................................TCCCTCCCACCTGCGCTTG 191.000.00------------------------------------------------1.00-----------------------------------------------------------------------
....................................................................................................................................................................................................................................GCCAGTCTCGGGTCCCTCCCATT....... 231.000.00-------------------------------------------------------------------------------------1.00----------------------------------
............................................................................................................................................................................................CCTCCCTTCGCTCTCGTTA................................................... 191.000.00------------------------------------------------------------------------------1.00-----------------------------------------
...................................................................................................................................................................................................................................TGCCAGTCTCGGGTCCCTCCCAAA....... 241.000.00------------------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................CACCCCTCCCGCGCCCCGAG......................................................................... 201.000.00-1.00----------------------------------------------------------------------------------------------------------------------