ID: uc003nqn.1_intron_9_0_chr6_30572872_r.5p
GENE: PPP1R10(10)
chr6:30573500-30573749-


(2)
AGO2.ip 		(4)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(27)
CELL-LINE 		(4)
CERVIX 		(1)
KIDNEY 		(2)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(11)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AACACCTAATGCCACCAAAGAGATCAAAGTGAAGATCATCCCGCCACAGCGTGAGTCTAAAGTGGGGAAGATGTACTTTGAATTAGGAGCAAACTTTTTTTTTTTTTTTTTTGGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACGGTCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACTGGTGCCCGCCACC
...................................................................................................................(((((((.....))))))).(((((((.(((((((((((((.((....)))).))))))..)))))))))...)))...........................................................
......................................................................................87.......................................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189782SRR029127(GSM416756)
A549. (cell line)		SRR189786SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................CAAACTTTTTTTTTTTTTTTTTAAAG.......................................................................................................................................2617.000.00--4.007.003.003.00-------------------------------------------------------
...................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTGGGT.............................................................265.000.005.00------------------------------------------------------------
..........................................................................................................................................AGGCTGGAGTGCAGTGGCACGGTGGC......................................................................................2605.001.005.00------------------------------------------------------------
...............CAAAGAGATCAAAGTGAAGGTAG....................................................................................................................................................................................................................235.000.00------3.00----2.00-------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTCAT.......................................................................................................................................244.000.00--2.00--1.00--------------1.00----------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTATT..........................................................................................................................................234.000.00--3.001.00---------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGGG.....................................................................................................................................254.000.004.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGGGG....................................................................................................................................264.000.003.001.00-----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGGC.....................................................................................................................................253.000.003.00------------------------------------------------------------
.ACACCTAATGCCACCAAAGAG....................................................................................................................................................................................................................................2113.003.00-------------3.00-----------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTATG........................................................................................................................................253.000.00--3.00----------------------------------------------------------
................................AGATCATCCCGCCACAGC........................................................................................................................................................................................................1813.003.00----------3.00--------------------------------------------------
...................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTGGG..............................................................253.000.003.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAGCC....................................................................................................................................262.000.001.001.00-----------------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTCCG.......................................................................................................................................252.000.00---2.00---------------------------------------------------------
................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCGGGT............................................................302.000.00-2.00-----------------------------------------------------------
................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTGGG..............................................................282.000.001.001.00-----------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTCGGG......................................................................................................................................252.000.002.00------------------------------------------------------------
............CACCAAAGAGATCAAAGTGAAGATC.....................................................................................................................................................................................................................2512.002.00----------------------1.00---------1.00----------------------------
..................................................................................................................................................GTGCAGTGGCACGGTCTTGGC...................................................................................2102.002.00--------2.00----------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGCTTT....................................................................................................................................262.000.001.001.00-----------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTCAAG.........................................................................................................................................242.000.00---2.00---------------------------------------------------------
................................................................GGGAAGATGTACTTTGAATTAGGAGC................................................................................................................................................................2612.002.00--------------2.00----------------------------------------------
..........................................................................................................................................AGGCTGGAGTGCAGTGGCACGGTGGCA.....................................................................................2702.001.002.00------------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTCCCG......................................................................................................................................252.000.001.00--1.00---------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTAT.........................................................................................................................................242.000.00--2.00----------------------------------------------------------
...................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCGGCTC.........................................................302.000.00-2.00-----------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTTATT.......................................................................................................................................262.000.00--1.001.00---------------------------------------------------------
.................................GATCATCCCGCCACAGC........................................................................................................................................................................................................1721.501.50-------------------------------------------1.00----------------0.50
.........................................................................................................................................................................ACTGCAAGCTCCGCCTCCCGGGCCCT.......................................................261.000.001.00------------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTCCGG......................................................................................................................................251.000.001.00------------------------------------------------------------
...............CAAAGAGATCAAAGTGAAGGTGG....................................................................................................................................................................................................................231.000.00-----------1.00-------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTGGGAAA....................................................................................................................................281.000.001.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAGACATGG................................................................................................................................301.000.001.00------------------------------------------------------------
................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCCCCGGA..........................................................321.000.001.00------------------------------------------------------------
...................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCAGCT...........................................................281.000.00-1.00-----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGCTGG....................................................................................................................................261.000.001.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAACGG...................................................................................................................................271.000.001.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGTT.....................................................................................................................................251.000.00-1.00-----------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTTATAA......................................................................................................................................271.000.00---1.00---------------------------------------------------------
..........................................................................................................................................................................CTGCAAGCTCCGCCTCCCGGGTTATT......................................................261.000.00-----------------------1.00-------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTGGTTT.....................................................................................................................................271.000.001.00------------------------------------------------------------
...............................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCT.....................................221.000.00-------------------------------1.00-----------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTAAAA.......................................................................................................................................261.000.00--1.00----------------------------------------------------------
............................................................................................................................................................ACGGTCTTGGCTCACTGCAAAAAA......................................................................241.000.00--------------------------------------------1.00----------------
................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCCGGGC...........................................................311.000.001.00------------------------------------------------------------
.................................................................................................................................................AGTGCAGTGGCACGGTCTTGGCTCAGTGC............................................................................291.000.00-1.00-----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGCT.....................................................................................................................................251.000.001.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAGGGAC..................................................................................................................................281.000.001.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAGTGGG..................................................................................................................................281.000.00-1.00-----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAGAGCAG.................................................................................................................................291.000.001.00------------------------------------------------------------
................................................................GGGAAGATGTACTTTGAATTAGGAGCAAACTT..........................................................................................................................................................3211.001.00---------------------------------------------------1.00---------
......................................................................................................................................................................................CCTCCCGGGTTCACGCCAGTTC..............................................221.000.00---------------1.00---------------------------------------------
..........................................................AAAGTGGGGAAGATGTACTTTGA.........................................................................................................................................................................2311.001.00-------------------1.00-----------------------------------------
..........................................................................................................................................AGGCTGGAGTGCAGTGGCACGGT.........................................................................................2301.001.00--------1.00----------------------------------------------------
...............CAAAGAGATCAAAGTGCAG........................................................................................................................................................................................................................191.000.00------------1.00------------------------------------------------
.................................................................................................TTTTTTTTTTTTTTTGGAGACAGAGTCCCT...........................................................................................................................301.000.00--------------------1.00----------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTCCTT........................................................................................................................................251.000.00----1.00--------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTACAG...........................................................................................................................................221.000.00---1.00---------------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTGGGGG.....................................................................................................................................271.000.001.00------------------------------------------------------------
......................................................................................................TTTTTTTTTTGGAGACAGAGACGC............................................................................................................................241.000.001.00------------------------------------------------------------
........................................................................................................TTTTTTTTGGAGACAGAGCGAC............................................................................................................................221.000.00-1.00-----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAAAAG...................................................................................................................................271.000.001.00------------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTATAG...........................................................................................................................................221.000.00----1.00--------------------------------------------------------
........................................................................................................................................................TGGCACGGTCTTGGCTCCCC..............................................................................201.000.00-1.00-----------------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTGGGACG....................................................................................................................................281.000.001.00------------------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTGGGAAG....................................................................................................................................281.000.001.00------------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTGGTGGA....................................................................................................................................271.000.001.00------------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTAAAA.........................................................................................................................................241.000.00---1.00---------------------------------------------------------
.................................................................................................................................................................................CTCCGCCTCCCGGGTTCACGCCAGAG...............................................261.000.001.00------------------------------------------------------------
.......................................................................................................TTTTTTTTTGGAGACAGAGCCCC............................................................................................................................231.000.00-1.00-----------------------------------------------------------
.............................................................................................................................................................................................................................AGTAGCTGGGACTACTGCCTC........211.000.00-1.00-----------------------------------------------------------
................................................................GGGAAGATGTACTTTGAATTAGGAG.................................................................................................................................................................2511.001.00-------------------1.00-----------------------------------------
...............CAAAGAGATCAAAGTGTAG........................................................................................................................................................................................................................191.000.00------------1.00------------------------------------------------
.........................................................................................................................................................................ACTGCAAGCTCCGCCTCCGG.............................................................201.000.00-----------------1.00-------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTCAAT......................................................................................................................................261.000.00----1.00--------------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTGGGTT.....................................................................................................................................271.000.001.00------------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTGGAACGG...................................................................................................................................281.000.00-1.00-----------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTACCG.........................................................................................................................................241.000.00----1.00--------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGGCG....................................................................................................................................261.000.00-1.00-----------------------------------------------------------
..............CCAAAGAGATCAAAGTGAAGATCAT...................................................................................................................................................................................................................2511.001.00------------------------1.00------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGCTCG....................................................................................................................................261.000.00-1.00-----------------------------------------------------------
.................................................................................................................................................AGTGCAGTGGCACGGTCGG......................................................................................191.000.001.00------------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTTCAG.......................................................................................................................................261.000.00--1.00----------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTCGG.........................................................................................................................................241.000.00---1.00---------------------------------------------------------
...................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCGGGC...........................................................281.000.001.00------------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTATT........................................................................................................................................251.000.00--1.00----------------------------------------------------------
......................................................................................................................................................................................CCTCCCGGGTTCACGCCCTC................................................201.000.00------------------------------------------------1.00------------
.....................................................................................................TTTTTTTTTTTGGAGACAGAGCCCG............................................................................................................................251.000.001.00------------------------------------------------------------
..............CCAAAGAGATCAAAGTGAAG........................................................................................................................................................................................................................2011.001.00---------------------------1.00---------------------------------
.........................................................................................................................................................GGCACGGTCTTGGCTCACTGCGG..........................................................................231.000.00---------------------------------------1.00---------------------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGTTCACGCCCCC................................................271.000.001.00------------------------------------------------------------
..................................................................................................................................................................TTGGCTCACTGCAAGCTCCGCCTCCCGGCTC.........................................................311.000.001.00------------------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTCCAT......................................................................................................................................261.000.00---1.00---------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAACAG...................................................................................................................................271.000.00-1.00-----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGAAG....................................................................................................................................261.000.001.00------------------------------------------------------------
........................................................................................................................................................TGGCACGGTCTTGGCTCCCGC.............................................................................211.000.001.00------------------------------------------------------------
...................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTAGGT.............................................................261.000.001.00------------------------------------------------------------
..................................................................................................................................................................................................ACGCCATTCTCCTGCCTCAGCCTCCCGACC..........................301.000.001.00------------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTCCAC......................................................................................................................................251.000.001.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGTTT....................................................................................................................................261.000.00-1.00-----------------------------------------------------------
.........................................................................................................................................................................ACTGCAAGCTCCGCCTCCCGGGGCCA.......................................................261.000.00-1.00-----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGACGG....................................................................................................................................261.000.001.00------------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGCTG.....................................................................................................................................251.000.001.00------------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTTAGTG......................................................................................................................................271.000.00--1.00----------------------------------------------------------
.............................................................................................CTTTTTTTTTTTTTTTTTTGGAGCCGG..................................................................................................................................271.000.001.00------------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTTATTG......................................................................................................................................271.000.00--1.00----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGC......................................................................................................................................241.000.001.00------------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTCAAG.......................................................................................................................................261.000.00----1.00--------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAACG....................................................................................................................................261.000.001.00------------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTGGGGG.....................................................................................................................................261.000.001.00------------------------------------------------------------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGTCACC......................................................211.000.001.00------------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTGGCTGC....................................................................................................................................271.000.00-1.00-----------------------------------------------------------
..........................................................................................................TTTTTTGGAGACAGAGTCCTGG..........................................................................................................................221.000.00-1.00-----------------------------------------------------------
...................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCGGTCC.........................................................301.000.00-1.00-----------------------------------------------------------
...............................................................................................................TGGAGACAGAGTCTCACTCCGCC....................................................................................................................231.000.001.00------------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTCGGC......................................................................................................................................251.000.001.00------------------------------------------------------------
...............................................................................................................................................................................................TTCACGCCATTCTCCTGCCTCTAA...................................241.000.00---------1.00---------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTCCCG......................................................................................................................................261.000.00---1.00---------------------------------------------------------
......................................................................................................................................ACCCAGGCTGGAGTGCAGTGGCACGGTCTG......................................................................................301.000.001.00------------------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTCAAG......................................................................................................................................261.000.00--1.00----------------------------------------------------------
...........................................................................................AACTTTTTTTTTTTTTTTTTTCTGC......................................................................................................................................251.000.00-1.00-----------------------------------------------------------
...............................................................................................................................................................................................TTCACGCCATTCTCCTGCCTAAA....................................231.000.00-----------------------------1.00-------------------------------
................................AGATCATCCCGCCACATC........................................................................................................................................................................................................181.000.00----------1.00--------------------------------------------------
.........................................................................................................................................................................ACTGCAAGCTCCGCCTCCCGGGGCC........................................................251.000.001.00------------------------------------------------------------
....................................................................................................................................TCACCCAGGCTGGAGTGCAGTGGCACGGCCC.......................................................................................311.000.001.00------------------------------------------------------------
.......AATGCCACCAAAGAGATCAAAGT............................................................................................................................................................................................................................2311.001.00----------------------------------------1.00--------------------
...............................................................................................................................................................GTCTTGGCTCACTGCAATCTC......................................................................211.000.00-------1.00-----------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTCAAC......................................................................................................................................261.000.00-----1.00-------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTTCAT.......................................................................................................................................261.000.00-----1.00-------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTCTAG.......................................................................................................................................261.000.00--1.00----------------------------------------------------------
..........................................................................................................................................AGGCTGGAGTGCAGTGGCACGGGGGC......................................................................................261.000.00-1.00-----------------------------------------------------------
.........................................................................................CAAACTTTTTTTTTTTTTTTTTTAAAA......................................................................................................................................271.000.00----1.00--------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGGCA.....................................................................................................................................251.000.001.00------------------------------------------------------------
..............................................................................................TTTTTTTTTTTTTTTTTTGGAGCGAG..................................................................................................................................261.000.00-1.00-----------------------------------------------------------
............................................................................................ACTTTTTTTTTTTTTTTTTTGGAAGGG...................................................................................................................................271.000.00-1.00-----------------------------------------------------------
.............................................................................................CTTTTTTTTTTTTTTTTTTGGAGAAAAG.................................................................................................................................281.000.00---1.00---------------------------------------------------------
.......................................................................................................................................CCCAGGCTGGAGTGCAGTGGCACGGTGTG......................................................................................291.000.00-1.00-----------------------------------------------------------
.......................................................................................................................................................................TCACTGCAAGCTCCGCCTCCCGGGGGC........................................................271.000.001.00------------------------------------------------------------
..........................................................................................AAACTTTTTTTTTTTTTTTTTTCTAG......................................................................................................................................261.000.00--1.00----------------------------------------------------------
...................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCGGGTCG........................................................311.000.001.00------------------------------------------------------------
...................................TCATCCCGCCACAGC........................................................................................................................................................................................................1520.500.50-----------------------------------------------------------0.50-

Antisense strand
AACACCTAATGCCACCAAAGAGATCAAAGTGAAGATCATCCCGCCACAGCGTGAGTCTAAAGTGGGGAAGATGTACTTTGAATTAGGAGCAAACTTTTTTTTTTTTTTTTTTGGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACGGTCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACTGGTGCCCGCCACC
...................................................................................................................(((((((.....))))))).(((((((.(((((((((((((.((....)))).))))))..)))))))))...)))...........................................................
......................................................................................87.......................................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189782SRR029127(GSM416756)
A549. (cell line)		SRR189786SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................................GGCTGGAGTGCAGTGGCACGGTGGGC..................................................................................... 2615.000.0014.001.00-----------------------------------------------------------
...........................................................................................................................................GGCTGGAGTGCAGTGGCACGGTCTGGGC................................................................................... 285.000.005.00------------------------------------------------------------
.............................................................................................................................................CTGGAGTGCAGTGGCACGGTCTAGC.................................................................................... 253.000.00-3.00-----------------------------------------------------------
.......................................................................................................................................CCCAGGCTGGAGTGCAGTGGCACGGTCTGGG.................................................................................... 312.000.001.001.00-----------------------------------------------------------
..................................................................................................................................................................................TCCGCCTCCCGGGTTCACGCCATTAAAT............................................ 282.000.00----------------------------------------------1.00-----1.00--------
...................................................................................................................................................................................CCGCCTCCCGGGTTCACGCGGGT................................................ 232.000.00----------------------------1.00--------------------------1.00-----
...................................................................................................................................GTCACCCAGGCTGGAGTGCAGTGGCACGGTGG....................................................................................... 322.000.002.00------------------------------------------------------------
.........................................................................................................................................CAGGCTGGAGTGCAGTGGCACGGTCTCGC.................................................................................... 292.000.00-2.00-----------------------------------------------------------
..................................................................................................................................................................................TCCGCCTCCCGGGTTCACGCCATACTT............................................. 272.000.00-------1.00------------------------------------------------1.00----
.........................................................................................................................................CAGGCTGGAGTGCAGTGGCACGGTC........................................................................................ 252.000.002.00------------------------------------------------------------
......................................................................................................................................ACCCAGGCTGGAGTGCAGTGGCACGGTCAG...................................................................................... 302.000.002.00------------------------------------------------------------
........................................................................................................................................................................CACTGCAAGCTCCGCCTCCCGGGTTCTCT..................................................... 292.000.00------2.00------------------------------------------------------
............................................................................................................................................GCTGGAGTGCAGTGGCACGGTGG....................................................................................... 232.000.002.00------------------------------------------------------------
...........................................................................................................................................................................TGCAAGCTCCGCCTCCCGGGTTTAA...................................................... 252.000.00---------2.00---------------------------------------------------
...........................................................................................................................................GGCTGGAGTGCAGTGGCACGGTAGGC..................................................................................... 262.000.002.00------------------------------------------------------------
.............................................................................................................................................................................CAAGCTCCGCCTCCCGGGTTCACGCCTAG................................................ 291.000.00-------1.00-----------------------------------------------------
.........................................................................................................................................CAGGCTGGAGTGCAGTGGCACGGTAAC...................................................................................... 271.000.00-1.00-----------------------------------------------------------
....................................................................................................................................................................................CGCCTCCCGGGTTCACGCCATTT............................................... 231.000.00----------------------------------------------------------1.00--
....................................................................................................................................................................................CGCCTCCCGGGTTCACGCCATTTTT............................................. 251.000.00-------------------------1.00-----------------------------------
....................................................................................................................................................................GGCTCACTGCAAGCTCCGCCTCTTT............................................................. 251.000.00------------1.00------------------------------------------------
...........................................................................................................................................................................TGCAAGCTCCGCCTCCCGGGTTCACGCCATA................................................ 311.000.00-------1.00-----------------------------------------------------
............................................................................................................................................GCTGGAGTGCAGTGGCACGGTCTACGG................................................................................... 271.000.00-1.00-----------------------------------------------------------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGTTCACGCCATTCCC............................................. 301.000.00-------------------------------------------------1.00-----------
.......................................................................................................................................CCCAGGCTGGAGTGCAGTGGCACGGTCTGAAC................................................................................... 321.000.001.00------------------------------------------------------------
....................................................................................................................................................................................CGCCTCCCGGGTTCACGCCATTCTTC............................................ 261.000.00-1.00-----------------------------------------------------------
..................................................................................................................................................................................TCCGCCTCCCGGGTTCACGACT.................................................. 221.000.00---------------------------------------------1.00---------------
........................................................................................................................................................................CACTGCAAGCTCCGCCTCCCGGGTTCTT...................................................... 281.000.001.00------------------------------------------------------------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGCGA........................................................ 191.000.00------------------------------------1.00------------------------
............................................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGTTTTT...................... 241.000.00---------------------------------1.00---------------------------
.........................................................................................................................................CAGGCTGGAGTGCAGTGGCACGGTACC...................................................................................... 271.000.001.00------------------------------------------------------------
...........................................................................................................................................GGCTGGAGTGCAGTGGCACGGTGCG...................................................................................... 251.000.001.00------------------------------------------------------------
........................................................................................................................................CCAGGCTGGAGTGCAGTGGCACGGTCTACC.................................................................................... 301.000.00-1.00-----------------------------------------------------------
.......................................................................................................................................CCCAGGCTGGAGTGCAGTGGCACGGTGGG...................................................................................... 291.000.001.00------------------------------------------------------------
....................................................................................................................................................................................CGCCTCCCGGGTTCACGCCATTAAT............................................. 251.000.00----------------1.00--------------------------------------------
.......................................................................................................................................................................TCACTGCAAGCTCCGCCTCCCGGGTTTT....................................................... 281.000.00-----------------------------------------1.00-------------------
...................................................................................................................................................................TGAACCCGGGAGGCGGAGCTTGCAGTGAGCCA....................................................... 3201.001.00--------1.00----------------------------------------------------
...........................................................................................................................................................................TGCAAGCTCCGCCTCCCGGGTTT........................................................ 231.000.00-----------------1.00-------------------------------------------
....................................................................................................................................................................................CGCCTCCCGGGTTCACCCGC.................................................. 201.000.00-----------------------------------1.00-------------------------
........................................................................................GCAAACTTTTTTTTTTTTGCCG............................................................................................................................................ 221.000.00---------1.00---------------------------------------------------
.........................................................................................................................................................................ACTGCAAGCTCCGCCTCCCGGGTTTCT...................................................... 271.000.00-----------1.00-------------------------------------------------
...........................................................................................................................................GGCTGGAGTGCAGTGGCACGGTGAG...................................................................................... 251.000.001.00------------------------------------------------------------
............................................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGTAGCTTTTT.................. 281.000.00-1.00-----------------------------------------------------------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGTTCACGCCATCGA.............................................. 291.000.001.00------------------------------------------------------------
..........................................................................................................................................................................................................................CCGAGTAGCTGGGACTACTAAGA......... 231.000.00---------------------------------------------------------1.00---
..............................................................................................................................................................................................GTTCACGCCATTCTCCTGCCTCAGCCAAA............................... 291.000.00--------------------------1.00----------------------------------
...........................................................................................................................................GGCTGGAGTGCAGTGGCACGGTGAGC..................................................................................... 261.000.001.00------------------------------------------------------------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGTTCACGCCACCC............................................... 281.000.001.00------------------------------------------------------------
...................................................................................................................................................................................CCGCCTCCCGGGTTCACGCCATTGGCA............................................ 271.000.00-1.00-----------------------------------------------------------
.................................................................................................................................................................................CTCCGCCTCCCGGGTTCACGCCATAA............................................... 261.000.00-----------------------------------------------------1.00-------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGTTCAAA..................................................... 221.000.00------------------1.00------------------------------------------
....................................................................................................................................................................................CGCCTCCCGGGTTCACGCCATT................................................ 221.000.00----------------1.00--------------------------------------------
.......................................................................................................................................................................................................................................ACTACTGGTGCCCGCCAACA 201.000.00--------------1.00----------------------------------------------
..........................................................................................................................................................................CTGCAAGCTCCGCCTCCCGGGAGG........................................................ 241.000.00---------------1.00---------------------------------------------
.........................................................................................................................................................................................................................CCCGAGTAGCTGGGACTACCCG........... 221.000.00-------------------------------------1.00-----------------------
.........................................................................................................................................CAGGCTGGAGTGCAGTGGCACGGTCTCG..................................................................................... 281.000.001.00------------------------------------------------------------
.................................................................................................................................................................................................CACGCCATTCTCCTGTAG....................................... 181.000.00--------------------------------------------------1.00----------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGTTCACGCCATAAC.............................................. 291.000.00-1.00-----------------------------------------------------------
................................................................................................................................................................................................TCACGCCATTCTCCTGCCTCAGCCCCAA.............................. 281.000.00--------------------------------------1.00----------------------
...................................................................................................................................GTCACCCAGGCTGGAGTGCAGTGGCACGGTTG....................................................................................... 321.000.00-1.00-----------------------------------------------------------
......................................................................................................................................ACCCAGGCTGGAGTGCAGTGGCACGGTTGG...................................................................................... 301.000.001.00------------------------------------------------------------
....................................................................................................................................................................................CGCCTCCCGGGTTCACGCCATTTAA............................................. 251.000.00------------------------------------------------------1.00------
..........................................................................................................................................AGGCTGGAGTGCAGTGGCACGGTCTAGC.................................................................................... 281.000.001.00------------------------------------------------------------
...........................................................................................................................................................................................CGGGTTCACGCCATTCTTGAT.......................................... 211.000.00------------------------------1.00------------------------------
.........................................................................................................................................CAGGCTGGAGTGCAGTGGCACGGTCTAGCG................................................................................... 301.000.001.00------------------------------------------------------------
.........................................................................................................................................................................................................................CCCGAGTAGCTGGGACTACTCGG.......... 231.000.00---------------------1.00---------------------------------------
...................................................................................................................................................................................CCGCCTCCCGGGTTCATG..................................................... 181.000.00-------1.00-----------------------------------------------------
......................................................................................................................................................................................................CATTCTCCTGCCTCAGCCTCCCGAGTATCGG..................... 311.000.00------------------1.00------------------------------------------
.........................................................................................................................................................................................CCCGGGTTCACGCCATTCTCCTTAA........................................ 251.000.00------------------------------------------1.00------------------
...........................................................................................................................................................................TGCAAGCTCCGCCTCCCGGGTTCACGCCACG................................................ 311.000.001.00------------------------------------------------------------
..........................................................................................................................................AGGCTGGAGTGCAGTGGCACGGTCGC...................................................................................... 2601.000.001.00------------------------------------------------------------
..................................................................................................................................................................TTGGCTCACTGCAAGCTCCGTGA................................................................. 231.000.00----------------------------------1.00--------------------------
...............................................................................................................................................................................AGCTCCGCCTCCCGGGTTCACGCCACTG............................................... 281.000.00-1.00-----------------------------------------------------------
.......................................................................................................................................CCCAGGCTGGAGTGCAGTGGCACGGTGACG..................................................................................... 301.000.001.00------------------------------------------------------------
.............................................................................................................................................CTGGAGTGCAGTGGCACGGTCTTGAG................................................................................... 261.000.001.00------------------------------------------------------------
.......................................................................................................................................CCCAGGCTGGAGTGCAGTGGCACGGTGAAC..................................................................................... 301.000.00-1.00-----------------------------------------------------------
..............................................................................................................................................TGGAGTGCAGTGGCACGGTCTA...................................................................................... 221.000.00-1.00-----------------------------------------------------------