ID: uc003nmp.3_intron_0_0_chr6_29524128_r.5p
GENE: (18)
chr6:29571118-29571367-


(1)
AGO2.ip 		(6)
BRAIN 		(2)
BREAST 		(3)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(2)
OTHER 		(6)
SKIN 		(1)
XRN.ip

Sense strand
GACCGGCTTAGCTGTGATGGGAGTCGAGTGCATTTGCTTTATAAGTGAGGGTAGGGTGAGGGAGGACAGGCCAGTAGGGGGAGGGAAAGGGAGAGGGGAAGGGCAGGGGACTCAGGAAGCAGGGGGTCCCCATCCCCAGCTGGGAAGAACATGCTATCCAATCTCATCTCTTGTAAATACATGTCCCCCTGTGAGTTCTGGGCTGATTTGGGTCTCTCATACCTCTGGGAAACAGACCTTTTTCTCTCTT
.....................................................................................................((((((((((((..........)))))))).((((.....))))......))))...............................................................................................
...................................................................................................100..........................................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040008(GSM532893)
G727N. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
..............................................................................................................................................................................................GTGAGTTCTGGGCTGATTTGG.......................................2114.004.003.00----1.00-------------------
........................................................................................................................................CAGCTGGGAAGAACATGCTA..............................................................................................2013.003.00-1.001.001.00---------------------
........................................................................................................AGGGGACTCAGGAAGCAG................................................................................................................................1812.002.001.00---1.00--------------------
..............................................................................................................................................................................................GTGAGTTCTGGGCTGATTTGGGTCTCT.................................2712.002.002.00------------------------
.........................GAGTGCATTTGCTTTATAAGTGAGGGTAGGGTGAGG.............................................................................................................................................................................................3612.002.00-------2.00-----------------
.........................................................................................................................................AGCTGGGAAGAACATGC................................................................................................1712.002.00---2.00---------------------
...............................................................................................................................................................................................TGAGTTCTGGGCTGATTTGGGTCTCT.................................2612.002.002.00------------------------
.......................................................................................................................................CCAGCTGGGAAGAACATGCTAT.............................................................................................2212.002.00-1.00--1.00--------------------
............................................................................................................................................................................................CTGTGAGTTCTGGGCTGATTTGG.......................................2312.002.002.00------------------------
.............................................................................................................................................................................................TGTGAGTTCTGGGCTGATTTGG.......................................2212.002.002.00------------------------
.........................................................................................................................................................................................CCCCTGTGAGTTCTGGGCTG.............................................2012.002.00--1.00-----------1.00----------
.........................................................................................................................................AGCTGGGAAGAACATGCT...............................................................................................1812.002.00--2.00----------------------
...........CTGTGATGGGAGTCGAGTGCA..........................................................................................................................................................................................................................2111.001.00--1.00----------------------
...........................................................................................................................................................................................CCTGTGAGTTCTGGGCT..............................................1711.001.00------------1.00------------
........................................................................................................................................CAGCTGGGAAGAACATGCT...............................................................................................1911.001.00-1.00-----------------------
..........................................................................................................GGGACTCAGGAAGCAGGGGGGC..........................................................................................................................221.000.00---1.00---------------------
.......................................................................................................................................CCAGCTGGGAAGAACATGGT...............................................................................................2011.001.00--1.00----------------------
...............................................................................................GGGAAGGGCAGGGGACTCAGGAAGCAG................................................................................................................................2711.001.001.00------------------------
................................................................................................................................................................................ATACATGTCCCCCTGTGAGTTCTGGG................................................2611.001.001.00------------------------
..................................................................................................AAGGGCAGGGGACTCAGGAAGC..................................................................................................................................2211.001.001.00------------------------
.......................................................................................................CAGGGGACTCAGGAAGCAGGGGG............................................................................................................................2311.001.001.00------------------------
......................................................................................................GCAGGGGACTCAGGAAGCAG................................................................................................................................2011.001.00--1.00----------------------
........TAGCTGTGATGGGAGTCGAGTGCAT.........................................................................................................................................................................................................................2511.001.00-1.00-----------------------
..............................................GAGGGTAGGGTGAGGTGAC.........................................................................................................................................................................................191.000.00----------------1.00--------
............................................................................................................................................................................GTAAATACATGTCCCCCTGTGAGTTCTGGGCT..............................................3211.001.001.00------------------------
.......................................................................................................................................CCAGCTGGGAAGAACATG.................................................................................................1811.001.00-1.00-----------------------
....................................................AGGGTGAGGGAGGACAAAG...................................................................................................................................................................................191.000.00-------------------1.00-----
..........................................................................................................GGGACTCAGGAAGCAGGGGGTC..........................................................................................................................2211.001.00-----1.00-------------------
...........CTGTGATGGGAGTCGAGTGCATTTG......................................................................................................................................................................................................................2511.001.00-1.00-----------------------
..........................................................................TAGGGGGAGGGAAAGATCG.............................................................................................................................................................191.000.00--------1.00----------------
........TAGCTGTGATGGGAGTCGAGTGCATTT.......................................................................................................................................................................................................................2711.001.00-1.00-----------------------
.................................................................................................................AGGAAGCAGGGGGTCCCCATC....................................................................................................................2111.001.00-1.00-----------------------
.............................................................................................................................................................................................TGTGAGTTCTGGGCTGATTTGGGTCTCTCA...............................3011.001.001.00------------------------
..........................................................................................................................................................................................CCCTGTGAGTTCTGGGCTGATTTGGGTCTCTCA...............................3311.001.001.00------------------------
.................................................................................................GAAGGGCAGGGGACTCAGGAAGCAGGGGG............................................................................................................................2911.001.001.00------------------------
.........................................................................................................................................AGCTGGGAAGAACATGCTATCCAATC.......................................................................................2611.001.00----1.00--------------------
.......................................................................................................................................CCAGCTGGGAAGAACAT..................................................................................................1711.001.00---1.00---------------------
.........................................................................GTAGGGGGAGGGAAAAAAA..............................................................................................................................................................191.000.00-----------1.00-------------
.....GCTTAGCTGTGATGGGAGT..................................................................................................................................................................................................................................1911.001.00------1.00------------------
..............................................................AGGACAGGCCAGTAGGGGGAGGAGGA..................................................................................................................................................................261.000.00-----------------1.00-------
................................................................................................................................................................................ATACATGTCCCCCTGTGAGTTCTGGGC...............................................2711.001.00-----1.00-------------------
..............................................................................................................................................................................................GTGAGTTCTGGGCTGATTTGGGTCTC..................................2611.001.001.00------------------------
.......................................................................................................................................CCAGCTGGGAAGAACATGCTATC............................................................................................2311.001.00--1.00----------------------
.................................................................................................................AGGAAGCAGGGGGTCCC........................................................................................................................1711.001.001.00------------------------
................................................................................................................CAGGAAGCAGGGGGTCCCCATCCCC.................................................................................................................2511.001.00-------------1.00-----------
.........................................................................................................................................................CTATCCAATCTCATCTCTTTC............................................................................211.000.00----------1.00--------------
..........................................................................................................................................GCTGGGAAGAACATGCTATCAA..........................................................................................221.000.00-1.00-----------------------
...........................................................................................................................................................................................................................................ACCTTTTTCTCTCTTAATG191.000.00--------1.00----------------
...................................GCTTTATAAGTGAGGGTAGG...................................................................................................................................................................................................2011.001.001.00------------------------
..................................................................................................................GGAAGCAGGGGGTCCCCATCC...................................................................................................................2111.001.001.00------------------------
.........................................................................................................................................................................................................................CATACCTCTGGGAAACA................1711.001.00-1.00-----------------------
...................................................................................................................................................AACATGCTATCCAATCTCATCTCTTGT............................................................................2711.001.00------------------1.00------
.......................................................................................................................................CCAGCTGGGAAGAACATGCTATCCA..........................................................................................2511.001.00-1.00-----------------------
..........................................................................................................................................................................TTGTAAATACATGTCCCCCTGTGAGTTCT...................................................2911.001.001.00------------------------
.........................................................................................................................................AGCTGGGAAGAACATGCTATCC...........................................................................................2211.001.00----1.00--------------------
.................................................................................................................................................................................TACATGTCCCCCTGTGAGTTCTGGGC...............................................2611.001.001.00------------------------
.........................................................................................................GGGGACTCAGGAAGCAGGG..............................................................................................................................1911.001.00---1.00---------------------
.........................................................................................................................................AGCTGGGAAGAACATGCTATCCA..........................................................................................2311.001.00-1.00-----------------------
.........................................................................................................................................AGCTGGGAAGAACATGCTAT.............................................................................................2011.001.00-1.00-----------------------
.........................................................................................................................................AGCTGGGAAGAACATGCAATC............................................................................................2111.002.00-1.00-----------------------
......CTTAGCTGTGATGGGAGT..................................................................................................................................................................................................................................1811.001.00----1.00--------------------
.............................................TGAGGGTAGGGTGAGGGAGGACA......................................................................................................................................................................................2311.001.00----------------------1.00--
............................................................................................................................................................................................CTGTGAGTTCTGGGCTGATTTGGGTCTC..................................2811.001.001.00------------------------
............................................................................................................................................................................................CTGTGAGTTCTGGGCTGA............................................1811.001.00------1.00------------------
........................................................................................................................................CAGCTGGGAAGAACATGCTAT.............................................................................................2111.001.00---1.00---------------------
......................................................................................................................................................................................................TGGGCTGATTTGGGTCTCTCATACCTCTG.......................2911.001.001.00------------------------
..............................................................................GGGAGGGAAAGGGAGACGCC........................................................................................................................................................201.000.00---------1.00---------------
..................................................................................................AAGGGCAGGGGACTCAGGAAGCAG................................................................................................................................2411.001.001.00------------------------
............................................................................................................................................................................................CTGTGAGTTCTGGGCTGATTTGGGTCTCTCA...............................3111.001.001.00------------------------
................................................................................................GGAAGGGCAGGGGACTCAGGAAGC..................................................................................................................................2411.001.00---------------1.00---------
................................................................................................................................................................................ATACATGTCCCCCTGTGAGTTCTGGGCT..............................................2811.001.001.00------------------------
.........................................................................................................................................AGCTGGGAAGAACATGCTATC............................................................................................2111.001.00---------------------1.00---
...............................................................................................................................................................................AATACATGTCCCCCTGTGAGTTCTGGGCT..............................................2911.001.001.00------------------------
...................................................................................................................................................................................CATGTCCCCCTGTGAGTTCTGGGCTGATTTG........................................3111.001.001.00------------------------
...........................................................................................................................................................................................................TGATTTGGGTCTCTCATA.............................1811.001.001.00------------------------
...............................................................................GGAGGGAAAGGGAGACTGC........................................................................................................................................................191.000.00----------1.00--------------
.....................................................................................................................................................................................................CTGGGCTGATTTGGGTCTCTCATACCTCT........................2911.001.001.00------------------------
....................................................................................................................................................................................ATGTCCCCCTGTGAGTTCTGCGC...............................................231.000.001.00------------------------
..................GGGAGTCGAGTGCATTTG......................................................................................................................................................................................................................1811.001.00--1.00----------------------
..................................................................CAGGCCAGTAGGGGGAGGG.....................................................................................................................................................................1911.001.001.00------------------------
........................................................................................................AGGGGACTCAGGAAGCA.................................................................................................................................1711.001.00-----1.00-------------------
..........................................................................................................................................................................................................................ATACCTCTGGGAAACAGACCTTTTTC......2611.001.001.00------------------------
.................................................GGTAGGGTGAGGGAGGAC.......................................................................................................................................................................................1811.001.00------1.00------------------
.....................................................................................AAAGGGAGAGGGGAAGGGCAGGGG.............................................................................................................................................2411.001.001.00------------------------
........................................................................................................................................................................................CCCCCTGTGAGTTCTGGGCTGATTTGG.......................................2711.001.00-----1.00-------------------
......................................................................................................GCAGGGGACTCAGGAAGCAGGG..............................................................................................................................2211.001.001.00------------------------
.............................................................................................................................................................................................TGTGAGTTCTGGGCTGTAG..........................................191.000.00--------------------1.00----
............................................................................................................GACTCAGGAAGCAGGGGGTCCC........................................................................................................................2211.001.001.00------------------------
........................................................................................................................................CAGCTGGGAAGAACATG.................................................................................................1730.670.67-0.330.33----------------------
....................................................................................................................................................................................................TCTGGGCTGATTTGGG......................................1630.330.33-----------------------0.33-
...................................................TAGGGTGAGGGAGGACA......................................................................................................................................................................................1740.250.25-----------0.25-------------
.................................................................................................................................................AGAACATGCTATCCAA.........................................................................................1660.170.17------------0.17------------

Antisense strand
GACCGGCTTAGCTGTGATGGGAGTCGAGTGCATTTGCTTTATAAGTGAGGGTAGGGTGAGGGAGGACAGGCCAGTAGGGGGAGGGAAAGGGAGAGGGGAAGGGCAGGGGACTCAGGAAGCAGGGGGTCCCCATCCCCAGCTGGGAAGAACATGCTATCCAATCTCATCTCTTGTAAATACATGTCCCCCTGTGAGTTCTGGGCTGATTTGGGTCTCTCATACCTCTGGGAAACAGACCTTTTTCTCTCTT
.....................................................................................................((((((((((((..........)))))))).((((.....))))......))))...............................................................................................
...................................................................................................100..........................................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040008(GSM532893)
G727N. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
.........................................................................................................................................................CTATCCAATCTCATCTCTTTT............................................................................ 211.000.00---------1.00---------------
............................................................................................TCCCCTGCCCTTCCCCTC............................................................................................................................................ 1870.140.14------------------------0.14