uc003ncn.1_intron_1_0_chr6_18156158

GAATCGCTTGAGCCCAGGAGTTCCAGGCTAGCCTGGGCAACATGGCAAGAATGTCTCAAAAGAAAAGAAAGAAAACTGTAGCTTTGTATTTAGGCAATCTGACATACATTCTTACCTACCAAAGTGTATAATAACTTGCTCCAGACTGTTAAAAATATTTGCAGATGCTAATATTTAATGGTCTGATTTTTCTTTTGCAGATTATTTAATGTAATGGCAACTCCACGGGGGAGGACAAAGAAAAAAGCAT
...........................................................................((((((...........(((((..((..(((((((............)))))))..))..))))).((((((((((..((((((.((....)).)))))))))))))))).........))))))..................................................
.....................................................................70......................................................................................................................................206..........................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR343337

SRR343336

SRR343334

SRR343335

SRR189785

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189784

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)

SRR189787

SRR390723(GSM850202)
total small RNA. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

SRR040037(GSM532922)
G243T. (cervix)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

SRR189782

SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)

SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR040039(GSM532924)
G531T. (cervix)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

..........................................................................ACTGTAGCTTTGTATTGGAC............................................................................................................................................................

276.00

0.00

109.00

94.00

29.00

4.00

2.00

1.00

2.00

1.00

...........................................................................CTGTAGCTTTGTATTGGAC............................................................................................................................................................

92.00

0.00

27.00

20.00

17.00

3.00

2.00

1.00

..........................................................................ACTGTAGCTTTGTATTGGAA............................................................................................................................................................

3.00

0.00

2.00

1.00

................................................................................................................................................................................................................ATGTAATGGCAACTCCACGGGGGAGGAC..............

2.00

..........................................................................ACTGTAGCTTTGTATTTGAC............................................................................................................................................................

2.00

0.00

1.00

2.00

0.00

2.00

1.00

0.00

1.00

..........................................................................ACTGTAGCTTTGTATGGGA.............................................................................................................................................................

1.00

0.00

1.00

...................................................................AAAGAAAACTGTAGCTTTGTATTTAGGCA..........................................................................................................................................................

1.00

..................................................................................................................................................................................TGGTCTGATTTTTCTTTTGCAGAA................................................

1.00

0.00

1.00

...............................................................AAAGAAAGAAAACTGTAGGATA.....................................................................................................................................................................

1.00

0.00

1.00

..........................................................................ACTGTAGCTTTGTATTGGTC............................................................................................................................................................

1.00

0.00

1.00

................................................................AAGAAAGAAAACTGTTGGG.......................................................................................................................................................................

1.00

0.00

1.00

..........................................................................ACTGTAGCTTTGTATTGGGC............................................................................................................................................................

1.00

0.00

1.00

.................................................................................................TCTGACATACATTCTTA........................................................................................................................................

1.00

0.00

1.00

........................AGGCTAGCCTGGGCAACATG..............................................................................................................................................................................................................

1.00

0.00

1.00

...........................................................................................................................................................................TATTTAATGGTCTGATTTTTCTTTTGCAGA.................................................

1.00

.......................CAGGCTAGCCTGGGCAACATG..............................................................................................................................................................................................................

0.25

GAATCGCTTGAGCCCAGGAGTTCCAGGCTAGCCTGGGCAACATGGCAAGAATGTCTCAAAAGAAAAGAAAGAAAACTGTAGCTTTGTATTTAGGCAATCTGACATACATTCTTACCTACCAAAGTGTATAATAACTTGCTCCAGACTGTTAAAAATATTTGCAGATGCTAATATTTAATGGTCTGATTTTTCTTTTGCAGATTATTTAATGTAATGGCAACTCCACGGGGGAGGACAAAGAAAAAAGCAT ...........................................................................((((((...........(((((..((..(((((((............)))))))..))..))))).((((((((((..((((((.((....)).)))))))))))))))).........)))))).................................................. .....................................................................70......................................................................................................................................206..........................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR343337	SRR343336	SRR343334	SRR343335	SRR189785	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR207110(GSM721072) Nuclear RNA. (cell line)	SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line)	SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin)	SRR189787	SRR390723(GSM850202) total small RNA. (cell line)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR033730(GSM497075) Lymphoblastic (ALL411). (B cell)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR033729(GSM497074) splenic MZL (Splenic414). (B cell)	SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver)	SRR040037(GSM532922) G243T. (cervix)	DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR033724(GSM497069) L428 cell line (L428). (B cell)	SRR189782	SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin)	SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line)	SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell)	SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell)	SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR040039(GSM532924) G531T. (cervix)	SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line)	SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line)	SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin)	SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line)	SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin)	SRR037944(GSM510482) 293DcrTN_cand5. (cell line)	SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..TGGAACTCCTGGGCTCAAGCGAT.................................................................................................................................................................................................................................	23	0	2.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................GCAGATTATTTAATGTTGTG..................................	20		2.00	0.00	-	-	-	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................................................................CGGGGGAGGACAAAGAAAGC.....	20		2.00	0.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................AAAGAAAGAAAACTGTAGGTC......................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-
..........................................................AAAGAAAAGAAAGAAAACTGTAACC.......................................................................................................................................................................	25		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.AATCGCTTGAGCCCAATTG......................................................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................AAAGAAAGAAAACTGTAGGTT......................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................AAAAGAAAGAAAACTGTAGGT.......................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............CCCAGGAGTTCCAGGCTAGCCTGGGCAAT.................................................................................................................................................................................................................	29		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........AGGCTAGCCTGGAACTCCTGGGCTC........................................................................................................................................................................................................................	25	5	1.00	1.00	-	-	-	-	-	0.20	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.80
...AGGCTAGCCTGGAACTCCTGGGCTCAAGCGA........................................................................................................................................................................................................................	31	1	1.00	1.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-