uc003mun.2_intron_6_0_chr6_2969148

GGCTCCGGCGCCTCTGCCCGCCGTTCTGCTCGCTCGCTCCCCGCTCTGGAGTACGTGTCTGGCTTGGGAGCCGCTCGGACACGCTGGCTTGGGTTTGTCGCTCCAAAGTCGGGAAAGCCGGGGGCGCGAGCGGGGAGGGGGGCAGGGTGGGGGTCGCGCGGGGCCGGGAACGCGCGTGGGTCGACGGCGCGCGGGGACGCTGGAGCCCCGAGAATGGGGCGTGGCCGCGCGGGGCTGTGACCCCAGCAGT
.....................................................(((..((((((......((((.(((.(((.(((.(((..(((((.((((((.....(((.....)))))))))))))).......))).))).)))....))).))))))))))..)))..............................................................................
..................................................51........................................................................................................................173...........................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR189783

SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR553575(SRX182781)
source: Kidney. (Kidney)

SRR040028(GSM532913)
G026N. (cervix)

SRR040011(GSM532896)
G529T. (cervix)

SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

TAX577740(Rovira)
total RNA. (breast)

GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)

SRR189785

TAX577741(Rovira)
total RNA. (breast)

SRR038854(GSM458537)
MM653. (cell line)

SRR037932(GSM510470)
293cand4_rep1. (cell line)

GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR390723(GSM850202)
total small RNA. (cell line)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)

SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR040024(GSM532909)
G613N. (cervix)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)

TAX577745(Rovira)
total RNA. (breast)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

TAX577743(Rovira)
total RNA. (breast)

GSM339995(GSM339995)
hues6NP. (cell line)

SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

....................................................ACGTGTCTGGCTTGGGAGC...................................................................................................................................................................................

9.00

7.00

2.00

......................................................GTGTCTGGCTTGGGAGCCGCT...............................................................................................................................................................................

9.00

.....................................................CGTGTCTGGCTTGGGAGCC..................................................................................................................................................................................

5.00

..................................................GTACGTGTCTGGCTTGGGAG....................................................................................................................................................................................

5.00

3.00

2.00

.........................................................................................................................................................TCGCGCGGGGCCGGGAGC...............................................................................

4.00

1.00

...................................................TACGTGTCTGGCTTGGGAGC...................................................................................................................................................................................

4.00

3.00

1.00

..................................................GTACGTGTCTGGCTTGG.......................................................................................................................................................................................

3.00

..............................................................................................................................................CAGGGTGGGGGTCGCGGGT.........................................................................................

3.00

0.00

3.00

...................................................TACGTGTCTGGCTTGGG......................................................................................................................................................................................

3.00

............................................................GGCTTGGGAGCCGCTCGGACACGCTGGCT.................................................................................................................................................................

3.00

..............................................................CTTGGGAGCCGCTCGGACAC........................................................................................................................................................................

3.00

................................................GAGTACGTGTCTGGCTTGGGA.....................................................................................................................................................................................

3.00

.........................................CGCTCTGGAGTACGTGTCTG.............................................................................................................................................................................................

2.00

1.00

.....................................................CGTGTCTGGCTTGGGAGCCGCTCG.............................................................................................................................................................................

2.00

.......................................CCCGCTCTGGAGTACGTGTCTG.............................................................................................................................................................................................

2.00

1.00

..............................CGCTCGCTCCCCGCTCTGGA........................................................................................................................................................................................................

2.00

...........................................................................................................GTCGGGAAAGCCGGGGGCG............................................................................................................................

2.00

.........................................................................................................................................................TCGCGCGGGGCCGGGAG................................................................................

2.00

1.00

.............................................................GCTTGGGAGCCGCTCGGA...........................................................................................................................................................................

2.00

....................................................ACGTGTCTGGCTTGGGAGCC..................................................................................................................................................................................

2.00

...........................................................TGGCTTGGGAGCCGCTCGGACACG.......................................................................................................................................................................

2.00

...............................................................TTGGGAGCCGCTCGGACAC........................................................................................................................................................................

1.00

..................................................GTACGTGTCTGGCTTGGGAGC...................................................................................................................................................................................

1.00

.....................................................CGTGTCTGGCTTGGGAGAC..................................................................................................................................................................................

1.00

0.00

1.00

...............................................................TTGGGAGCCGCTCGGACA.........................................................................................................................................................................

1.00

............................................................................................................................CGCGAGCGGGGAGGGGGG............................................................................................................

1.00

..................................................GTACGTGTCTGGCTTGGGGG....................................................................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................TCGCGCGGGGCCGGGAGA...............................................................................

1.00

................................................................................................................................AGCGGGGAGGGGGGCAAA........................................................................................................

1.00

0.00

1.00

.......................................................TGTCTGGCTTGGGAGCCGCT...............................................................................................................................................................................

1.00

......................................CCCCGCTCTGGAGTACG...................................................................................................................................................................................................

1.00

........................................................................................................................................................GTCGCGCGGGGCCGGG..................................................................................

1.00

.........................................CGCTCTGGAGTACGTGTCTGGCTTGGGA.....................................................................................................................................................................................

1.00

..................................................................................................................................CGGGGAGGGGGGCAGGGCGGA...................................................................................................

1.00

0.00

1.00

...................................GCTCCCCGCTCTGGAGTA.....................................................................................................................................................................................................

1.00

.............................................................GCTTGGGAGCCGCTCGG............................................................................................................................................................................

1.00

........................TCTGCTCGCTCGCTCCC.................................................................................................................................................................................................................

1.00

...............................................................................................................................................................................................CGGGGACGCTGGAGCCCGA........................................

1.00

0.00

1.00

........................................................................................................................................................GTCGCGCGGGGCCGGGAGCC..............................................................................

1.00

0.00

1.00

........................................................................................................................GGGGCGCGAGCGGGGCC.................................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................AACGCGCGTGGGTCGGG.................................................................

1.00

0.00

1.00

....................................................ACGTGTCTGGCTTGGGAGCCGC................................................................................................................................................................................

1.00

...........................................................TGGCTTGGGAGCCGCTCGGACA.........................................................................................................................................................................

1.00

................................................GAGTACGTGTCTGGCTTGGG......................................................................................................................................................................................

1.00

...........................................CTCTGGAGTACGTGTCTGGCTTGGGAGC...................................................................................................................................................................................

1.00

.........................................................................................................................................................TCGCGCGGGGCCGGGA.................................................................................

1.00

...................................................TACGTGTCTGGCTTGGGAG....................................................................................................................................................................................

1.00

.......................................CCCGCTCTGGAGTACGTGTC...............................................................................................................................................................................................

1.00

...............................................GGAGTACGTGTCTGGCTTGGG......................................................................................................................................................................................

1.00

........................................CCGCTCTGGAGTACGTGTCT..............................................................................................................................................................................................

1.00

..........................................................CTGGCTTGGGAGCCGCTCGGACAC........................................................................................................................................................................

1.00

.............................................CTGGAGTACGTGTCTGA............................................................................................................................................................................................

1.00

0.00

1.00

.................CCGCCGTTCTGCTCGCTC.......................................................................................................................................................................................................................

1.00

.......................................CCCGCTCTGGAGTACGTGT................................................................................................................................................................................................

1.00

...........................................................................................................................................................................................................................CGTGGCCGCGCGGGGCTGTGACCTCTG....

1.00

0.00

1.00

.......................................CCCGCTCTGGAGTACGTG.................................................................................................................................................................................................

1.00

..............................................................................................................GGGAAAGCCGGGGGCAC...........................................................................................................................

1.00

0.00

1.00

....................................................ACGTGTCTGGCTTGGGAG....................................................................................................................................................................................

1.00

....................................CTCCCCGCTCTGGAGTACGTGT................................................................................................................................................................................................

1.00

...........................................CTCTGGAGTACGTGTCTG.............................................................................................................................................................................................

1.00

......................................................................................................................................................GGGTCGCGCGGGGCC.....................................................................................

0.33

......................................................................................................................................GAGGGGGGCAGGGTGGGGG.................................................................................................

0.33

........................................................................................................................................................................................CGGCGCGCGGGGACGC..................................................

0.25

GGCTCCGGCGCCTCTGCCCGCCGTTCTGCTCGCTCGCTCCCCGCTCTGGAGTACGTGTCTGGCTTGGGAGCCGCTCGGACACGCTGGCTTGGGTTTGTCGCTCCAAAGTCGGGAAAGCCGGGGGCGCGAGCGGGGAGGGGGGCAGGGTGGGGGTCGCGCGGGGCCGGGAACGCGCGTGGGTCGACGGCGCGCGGGGACGCTGGAGCCCCGAGAATGGGGCGTGGCCGCGCGGGGCTGTGACCCCAGCAGT .....................................................(((..((((((......((((.(((.(((.(((.(((..(((((.((((((.....(((.....)))))))))))))).......))).))).)))....))).))))))))))..))).............................................................................. ..................................................51........................................................................................................................173...........................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR207110(GSM721072) Nuclear RNA. (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR207111(GSM721073) Whole cell RNA. (cell line)	DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela)	SRR189783	SRR330876(SRX091714) tissue: skin psoriatic involveddisease state:. (skin)	SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line)	SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line)	SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin)	GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)	GSM956925Ago2(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)	SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart)	SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart)	SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin)	SRR553575(SRX182781) source: Kidney. (Kidney)	SRR040028(GSM532913) G026N. (cervix)	SRR040011(GSM532896) G529T. (cervix)	SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin)	SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast)	TAX577740(Rovira) total RNA. (breast)	GSM956925PazD5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line)	SRR189785	TAX577741(Rovira) total RNA. (breast)	SRR038854(GSM458537) MM653. (cell line)	SRR037932(GSM510470) 293cand4_rep1. (cell line)	GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line)	SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin)	SRR390723(GSM850202) total small RNA. (cell line)	SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line)	SRR191411(GSM715521) 21genomic small RNA (size selected RNA from t. (breast)	SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin)	SRR060168(GSM565978) 5-8F_nucleus. (cell line)	SRR191602(GSM715712) 60genomic small RNA (size selected RNA from t. (breast)	SRR060169(GSM565979) 5-8F_cytoplasm. (cell line)	SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart)	GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR040024(GSM532909) G613N. (cervix)	SRR330920(SRX091758) tissue: normal skindisease state: normal. (skin)	SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin)	TAX577745(Rovira) total RNA. (breast)	SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin)	TAX577743(Rovira) total RNA. (breast)	GSM339995(GSM339995) hues6NP. (cell line)	SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin)	DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line)	SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..........GCAGAACGGCGGGCAGAGG.............................................................................................................................................................................................................................	19	1	2.00	2.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................AGACACGTACTCCAGAG..............................................................................................................................................................................................	17	1	2.00	2.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................TCCCCGCGCGCCGTCGAC.....................................................	18	1	2.00	2.00	-	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......ACGGCGGGCAGAGGCGC..................................................................................................................................................................................................................................	17	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................GGAAAGCCGGGGGCGTTCG........................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................GCGCGGGGCCGGGAAAGG.............................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................GCTCGCTCGCTCCCCTTC.............................................................................................................................................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........AACGGCGGGCAGAGGCG.................................................................................................................................................................................................................................	17	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
...................GCGAGCGAGCAGAACGGC.....................................................................................................................................................................................................................	18	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................GCGCCGTCGACCCACGC............................................................	17	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................CCGCTCGGACACGCTTCTT.................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................GGGGAGCGAGCGAGCAGAA................................................................................................................................................................................................................	19	1	1.00	1.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................GTACTCCAGAGCGGGGAGC....................................................................................................................................................................................................	19	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................AGCCGCTCGGACACGGAA....................................................................................................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................CGGGGAGCGAGCGAGC...............................................................................................................................................................................................................	16	3	0.33	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.33	-	-	-
..........................................................................................................................................................................................................................................ACTGCTGGGGTCACAG	16	6	0.17	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.17