ID: uc003mkf.3_intron_7_0_chr5_179045062_r
GENE: (6)
chr5:179045012-179045195-


(3)
AGO2.ip 		(12)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(29)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(5)
HEART 		(8)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(19)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(2)
XRN.ip

Sense strand
TGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTCAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGATTT
..................................................((((..((.((((.((........)).)))).))....(((......)))..................))))..............................................................
..................................................51..........................................................................127.......................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR029130(GSM416759)
DLD2. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTCAG..................................................841211.00211.00108.0096.00-------4.003.00--------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTCA...................................................83162.0062.0059.001.00-------1.00---------1.00-----------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTCAGT.................................................85145.00211.0045.00------------------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTC....................................................82139.0039.0038.00---------1.00--------------------------------------------------------------------------------------
.................................................................................................................................................TATGATGATTACAATGGCTATAATGATG...........28129.0029.00----13.00-11.00-----------1.00-----------1.00---------2.00---------------------1.00----------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTT......................................................80127.0027.0021.005.00-------1.00---------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAA....................................................................................................................1817.007.00------------------------------1.00------2.00-----------------------1.00-----------1.00-----1.001.00----------------
...................................................TACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTCAG..................................................8317.007.007.00------------------------------------------------------------------------------------------------
.......................................TTATGGTGGAGGTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTC........................................................8916.006.00-6.00-----------------------------------------------------------------------------------------------
............................................................................AAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTCAGA.................................................595.000.005.00------------------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTCTT..................................................8415.0039.005.00------------------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGC............................................................................................................2615.005.00--1.00-----------1.001.00------------1.00--------------1.00-----------------------------------------------------
......AGGAGCTGGCTTTGAGAG................................................................................................................................................................1815.005.00-----2.00--------1.00-------------------1.00-----------1.00--------------------------------------------------
........................................................................................................TTATTTGATTGATTGTACTTTGTCTTTCAG..................................................3014.004.00----4.00--------------------------------------------------------------------------------------------
.........AGCTGGCTTTGAGAGGATG............................................................................................................................................................1914.004.00--3.00-------------------------------1.00--------------------------------------------------------------
......................................................................................................................................................................AATGATGGCTATGGATTT1823.503.50-----1.50------0.50----------------------------------0.50------------------------------------------1.00------
......................AGGATGAGGCGTGGTGCTTATGGTGGAGGCCA..................................................................................................................................323.000.00---2.00---1.00-----------------------------------------------------------------------------------------
......................AGGATGAGGCGTGGTGCTT...............................................................................................................................................1913.003.00-------------3.00-----------------------------------------------------------------------------------
........................................................................................................................................................ATTACAATGGCTATAATGATG...........2113.003.00--3.00----------------------------------------------------------------------------------------------
.GGCAGAGGAGCTGGCTTTGAGAGGATGA...........................................................................................................................................................2813.003.00---------------------2.00---1.00-----------------------------------------------------------------------
...................................................................................................................................................................TATAATGATGGCTATGGATTT2113.003.00-----1.00-----------------------------------------1.00----------------------------------1.00--------------
............................AGGCGTGGTGCTTATGGTGGAGG.....................................................................................................................................2313.003.00------------------------3.00------------------------------------------------------------------------
..........................................................................................................................................TGGAGGCTATGATGATTACAATG.......................2313.003.00--2.00--------------------------------------------------------------------------------1.00-------------
....................AGAGGATGAGGCGTGGTGCTTATG............................................................................................................................................2413.003.00--2.00------------------------------------------------------------------1.00---------------------------
......AGGAGCTGGCTTTGAGAGGATGAGATC.......................................................................................................................................................273.000.00----------------3.00--------------------------------------------------------------------------------
.................................................................................................................................................TATGATGATTACAATGGCTATAATGATT...........283.000.00----3.00--------------------------------------------------------------------------------------------
....AGAGGAGCTGGCTTTGAGAGGATT............................................................................................................................................................2413.001.00--3.00----------------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTAAA.............................................................733.000.00-3.00-----------------------------------------------------------------------------------------------
..................TGAGAGGATGAGGCGTGGTGCTC...............................................................................................................................................232.000.00---1.00---1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................TAATGATGGCTATGGATTT1912.002.00-----------1.00---------------------------------------------1.00---------------------------------------
....................................................................................................TGTTTTATTTGATTGATTGTACTTTGTCTTTCAGG.................................................3512.002.00------------------2.00------------------------------------------------------------------------------
........................................................................................................................................................ATTACAATGGCTATAATGATGG..........2212.002.00--2.00----------------------------------------------------------------------------------------------
.......................................................................................................TTTATTTGATTGATTGTACT.............................................................2012.002.00------------------------------------------2.00------------------------------------------------------
...................................................................................................................ATTGTACTTTGTCTTTCAG..................................................1912.002.00---------------------------------------------------------------------------1.00---------1.00-----------
.....GAGGAGCTGGCTTTGAGAGGATGAG..........................................................................................................................................................2512.002.00------------1.00---1.00--------------------------------------------------------------------------------
.GGCAGAGGAGCTGGCTTTGAGAG................................................................................................................................................................2312.002.00-----2.00-------------------------------------------------------------------------------------------
......AGGAGCTGGCTTTGAGAGGATGAGG.........................................................................................................................................................2512.002.00------------------------------------1.00----------------------------------1.00-------------------------
....................AGAGGATGAGGCGTGGTGCTTT..............................................................................................................................................222.000.00-------------------------------1.00-------------------------------1.00---------------------------------
.GGCAGAGGAGCTGGCTTTGAG..................................................................................................................................................................2112.002.00------------1.00----------------------------------------------------------------1.00-------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCT.......................................................7912.002.00-------------------2.00-----------------------------------------------------------------------------
......................................................................................................TTTTATTTGATTGATTGTACTTTGTCTTTCAG..................................................3212.002.00------------------1.00----------1.00-------------------------------------------------------------------
...................GAGAGGATGAGGCGTGAAA..................................................................................................................................................192.000.00--2.00----------------------------------------------------------------------------------------------
.........................................................................................................................................ATGGAGGCTATGATGATTA............................1912.002.00----------------------1.00------------------------------------1.00-------------------------------------
.........AGCTGGCTTTGAGAGGATGAGGCGTG.....................................................................................................................................................2612.002.00--2.00----------------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGG.............................................................................................................2512.002.00--------------------------2.00----------------------------------------------------------------------
.............................................................................................................TGATTGATTGTACTTTGTCTTTCAGA.................................................262.000.00--2.00----------------------------------------------------------------------------------------------
................................................................................................................TTGATTGTACTTTGTCTTTCAGA.................................................232.000.00--2.00----------------------------------------------------------------------------------------------
........GAGCTGGCTTTGAGAGGATGAGGCGTG.....................................................................................................................................................2712.002.00--------------------------------1.00--------------------------------1.00-------------------------------
....AGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTG..................................................................................................................................................3412.002.00--------2.00----------------------------------------------------------------------------------------
..GCAGAGGAGCTGGCTTTGAGAGGATGA...........................................................................................................................................................2712.002.00--------------1.00------------1.00---------------------------------------------------------------------
....AGAGGAGCTGGCTTTGAGAG................................................................................................................................................................2012.002.00-----------------2.00-------------------------------------------------------------------------------
...................................................TACGTGAGGATTCGTAAGGTTCGGC............................................................................................................2512.002.00--------2.00----------------------------------------------------------------------------------------
.........AGCTGGCTTTGAGAGGATGAGGCGTGGTGC.................................................................................................................................................3012.002.00-------2.00-----------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTT.....................................................8112.002.001.00------------------1.00-----------------------------------------------------------------------------
........................................................................................................TTATTTGATTGATTGTACTTTGT.........................................................2312.002.00--2.00----------------------------------------------------------------------------------------------
......................AGGATGAGGCGTGGTGCT................................................................................................................................................1812.002.00-----2.00-------------------------------------------------------------------------------------------
....AGAGGAGCTGGCTTTGAGAGGATGA...........................................................................................................................................................2512.002.00---------------------------------1.00----------------------------------------1.00----------------------
...CAGAGGAGCTGGCTTTGAGAGG...............................................................................................................................................................2212.002.00---2.00---------------------------------------------------------------------------------------------
.........................................................................................................................................ATGGAGGCTATGATGATTACAATGGC.....................2611.001.00---------------1.00---------------------------------------------------------------------------------
...CAGAGGAGCTGGCTTTGAGAGGATGAGGCGCGG....................................................................................................................................................331.000.00-------1.00-----------------------------------------------------------------------------------------
............................................................ATTCGTAAGGTTCGGCAAG.........................................................................................................1911.001.00-------1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................TGATTACAATGGCTATAATGATGGCT........2611.001.00--1.00----------------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGG..................................................................................................................2011.001.00-------------------------------------------------------------------------------------------1.00-----
.GGCAGAGGAGCTGGCTTTGAGAGGAAGG...........................................................................................................................................................281.000.00---------------------1.00---------------------------------------------------------------------------
.....GAGGAGCTGGCTTTGAGA.................................................................................................................................................................1811.001.00-----1.00-------------------------------------------------------------------------------------------
......................AGGATGAGGCGTGGTGCTGAA.............................................................................................................................................2111.002.00--------------------------------------------------------------------------------------1.00----------
....................................................................................................................................AGGCTATGGAGGCTATGATAA...............................211.000.00-----------1.00-------------------------------------------------------------------------------------
......AGGAGCTGGCTTTGAGAGGATG............................................................................................................................................................2211.001.00------------------------------------------------1.00------------------------------------------------
.......GGAGCTGGCTTTGAGAGGATGAGG.........................................................................................................................................................2411.001.00--------------------------------------------------------1.00----------------------------------------
............................................................................................................................................GAGGCTATGATGATTACAATGGC.....................2311.001.00--1.00----------------------------------------------------------------------------------------------
......AGGAGCTGGCTTTGAGAGGATGAGGCGTGCGC..................................................................................................................................................3211.001.00---1.00---------------------------------------------------------------------------------------------
....................AGAGGATGAGGCGTGGTGTT................................................................................................................................................2011.001.00------------------------------------1.00------------------------------------------------------------
.......................GGATGAGGCGTGGTGCTTATGGTG.........................................................................................................................................2411.001.00------------------------------------------------------------------------------------1.00------------
.............................................................................................................................................................AATGGCTATAATGATGGCTA.......2011.001.00-----1.00-------------------------------------------------------------------------------------------
.................TTGAGAGGATGAGGCGTGGTGCCT...............................................................................................................................................241.000.00---1.00---------------------------------------------------------------------------------------------
.....................................................CGTGAGGATTCGTAAGGT.................................................................................................................1811.001.00---------------------------------------1.00---------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAG...................................................................................................................1911.001.00--------------------------------------------------1.00----------------------------------------------
...................GAGAGGATGAGGCGTGGTGCTT...............................................................................................................................................2211.001.00-----------------------------------------------------------------------------------------1.00-------
....................AGAGGATGAGGCGTGGCGC.................................................................................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------
...........................GAGGCGTGGTGCTTATGGTGGAGG.....................................................................................................................................2411.001.00-----------------------------1.00-------------------------------------------------------------------
..GCAGAGGAGCTGGCTCAGG...................................................................................................................................................................191.000.00---------------------------------------1.00---------------------------------------------------------
.......................................................................................................................................CTATGGAGGCTATGATGATTACAATG.......................2611.001.00--1.00----------------------------------------------------------------------------------------------
...........CTGGCTTTGAGAGGATGAGGCGTGGTGC.................................................................................................................................................2811.001.00--------------------------------------1.00----------------------------------------------------------
..GCAGAGGAGCTGGCTTTGAGAGGA..............................................................................................................................................................2411.001.00----------------------------------------------1.00--------------------------------------------------
......AGGAGCTGGCTTTGAGAGGATGAGGCGCG.....................................................................................................................................................2911.001.00--------------------1.00----------------------------------------------------------------------------
.....................GAGGATGAGGCGTGGTGCTTACGG...........................................................................................................................................241.000.00---1.00---------------------------------------------------------------------------------------------
...................GAGAGGATGAGGCGTGGTG..................................................................................................................................................1911.001.00----------------------------------------------------------1.00--------------------------------------
......................AGGATGAGGCGTGGTGCTTATGGTGGAG......................................................................................................................................2811.001.00---------------------------------------------------------------------------------------1.00---------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTAAG..................................................8411.002.00----------1.00--------------------------------------------------------------------------------------
.....................................................................................................GTTTTATTTGATTGATTGTACTTTGTCTTT.....................................................3011.001.00---------------------------------------------1.00---------------------------------------------------
........................................................................................................................................TATGGAGGCTATGATGATTACACTG.......................251.000.00------------1.00------------------------------------------------------------------------------------
......................................................................................................................................GCTATGGAGGCTATGATA................................181.000.00-----------1.00-------------------------------------------------------------------------------------
..................TGAGAGGATGAGGCGTGGCG..................................................................................................................................................201.000.00---1.00---------------------------------------------------------------------------------------------
...CAGAGGAGCTGGCTTTGA...................................................................................................................................................................1821.001.00-------------------------0.50---------------------------------------------------------------------0.50-
.......................................................................................................................................CTATGGAGGCTATGATGAT..............................1911.001.00--------------1.00----------------------------------------------------------------------------------
.....GAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTG..................................................................................................................................................3311.001.00---1.00---------------------------------------------------------------------------------------------
...............CTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGA.......................................................................................................................................3411.001.00------------------------------------------------------------------------1.00------------------------
....................AGAGGATGAGGCGTGGTG..................................................................................................................................................1811.001.00--1.00----------------------------------------------------------------------------------------------
.........................................................................................................TATTTGATTGATTGTACTTTGTCTT......................................................2511.001.00----------------------------------------------------------------------1.00--------------------------
...CAGAGGAGCTGGCTTTGGG..................................................................................................................................................................191.000.00-------------------------------------------1.00-----------------------------------------------------
.....GAGGAGCTGGCTTTGAGAGGATGAGGC........................................................................................................................................................2711.001.00--------1.00----------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGAAA..........................................................................................................2811.002.00--1.00----------------------------------------------------------------------------------------------
......AGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGC.................................................................................................................................................3311.001.00---1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................TGGAGGCTATGATGATTACAA.........................2111.001.00-------------1.00-----------------------------------------------------------------------------------
.....................................................CGTGAGGATTCGTAAGGTTCGGC............................................................................................................2311.001.00-----------------------------------1.00-------------------------------------------------------------
..GCAGAGGAGCTGGCTTTGA...................................................................................................................................................................1911.001.00-------------------------1.00-----------------------------------------------------------------------
...........................................................................................................TTTGATTGATTGTACTTTGTCTTTCAG..................................................2711.001.00--------------------------------1.00----------------------------------------------------------------
..........GCTGGCTTTGAGAGGATGA...........................................................................................................................................................1911.001.00-----------------------------------------1.00-------------------------------------------------------
......AGGAGCTGGCTTTGAGAGGAT.............................................................................................................................................................2111.001.00--------------------------------------------------------------------1.00----------------------------
......AGGAGCTGGCTTTGAGAGGATGAGGCGTGGCGC.................................................................................................................................................331.000.00-------1.00-----------------------------------------------------------------------------------------
......................AGGATGAGGCGTGGTGCTTGG.............................................................................................................................................2111.003.00-------------------------------------------------------1.00-----------------------------------------
....................................................................................................................................................................ATAATGATGGCTATGGATT.1911.001.00-----1.00-------------------------------------------------------------------------------------------
.................TTGAGAGGATGAGGCGTGGTGCTTATGGTGGA.......................................................................................................................................3211.001.00---------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................ATGATGATTACAATGGCTATAATGATGGCTATG.....3311.001.00---------------1.00---------------------------------------------------------------------------------
.......................................................................................................TTTATTTGATTGATTACC...............................................................181.000.00------------------------------------------------------------------------------1.00------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCA...........................................................................................................2711.001.00--1.00----------------------------------------------------------------------------------------------
........................GATGAGGCGTGGTGCTTATGGTGG........................................................................................................................................2411.001.00--1.00----------------------------------------------------------------------------------------------
...............CTTTGAGAGGATGAGGCGTGGTGCTCATG............................................................................................................................................291.000.00--------------------1.00----------------------------------------------------------------------------
.........................................................AGGATTCGTAAGGTTCGGC............................................................................................................1911.001.00-----------------------------------------1.00-------------------------------------------------------
....AGAGGAGCTGGCTTTGAGAGGATGAGGCGTGG....................................................................................................................................................3211.001.00---1.00---------------------------------------------------------------------------------------------
..........................TGAGGCGTGGTGCTTATGGTGGAG......................................................................................................................................2411.001.00---1.00---------------------------------------------------------------------------------------------
..........................TGAGGCGTGGTGCTTATGGTGGAGGCT...................................................................................................................................271.000.00-------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................TATGATGATTACAATGG......................1711.001.00-----------------------------------1.00-------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCG......................................................................................................3211.001.00---------------------------------------------------------------------------------------------1.00---
........................................................................................................................................................ATTACAATGGCTATAATGATTGC.........231.000.00----------------------------------------------------------------------------------------------1.00--
................TTTGAGAGGATGAGGTGAA.....................................................................................................................................................191.000.00---------------------------1.00---------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTCCA...................................................8311.0027.001.00------------------------------------------------------------------------------------------------
............................................................................................................TTGATTGATTGTACTTTGTCTTT.....................................................2311.001.00-------------------------------1.00-----------------------------------------------------------------
......AGGAGCTGGCTTTGAGAGGATGA...........................................................................................................................................................2311.001.00------------1.00------------------------------------------------------------------------------------
.....GAGGAGCTGGCTTTGAGAGGATGAGGCGT......................................................................................................................................................2911.001.00--------1.00----------------------------------------------------------------------------------------
...CAGAGGAGCTGGCTTTGAGAGGATGA...........................................................................................................................................................2611.001.00------------1.00------------------------------------------------------------------------------------
..............GCTTTGAGAGGATGAGGCGTGG....................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------1.00--------
.....................................................................................................................................................................TAATGATGGCTATGGATA.181.000.00-----1.00-------------------------------------------------------------------------------------------
..GCAGAGGAGCTGGCTTTGAGAGGTA.............................................................................................................................................................251.000.00-----------1.00-------------------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTATT.............................................................731.000.00----------1.00--------------------------------------------------------------------------------------
....AGAGGAGCTGGCTTTGAGAGGAT.............................................................................................................................................................2311.001.00---1.00---------------------------------------------------------------------------------------------
....AGAGGAGCTGGCTTTGAGAGGATGAGGC........................................................................................................................................................2811.001.00--------1.00----------------------------------------------------------------------------------------
...............................................................................................................ATTGATTGTACTTTGTCTTTCAG..................................................2311.001.00-----------------------1.00-------------------------------------------------------------------------
...........CTGGCTTTGAGAGGATGA...........................................................................................................................................................1811.001.00-----------------------------------------------------1.00-------------------------------------------
............................AGGCGTGGTGCTTATGGTGGAGGC....................................................................................................................................2411.003.00---1.00---------------------------------------------------------------------------------------------
..GCAGAGGAGCTGGCTTTGAGAGGATG............................................................................................................................................................2611.001.00-----------1.00-------------------------------------------------------------------------------------
.....GAGGAGCTGGCTTTGAGAGGATGA...........................................................................................................................................................2411.001.00------------------------------------------------------1.00------------------------------------------
....................................................................................................................................AGGCTATGGAGGCTATGATGATT.............................2311.001.00----------------------1.00--------------------------------------------------------------------------
..................TGAGAGGATGAGGCGTGGCGC.................................................................................................................................................211.000.00---1.00---------------------------------------------------------------------------------------------
...................GAGAGGATGAGGCGTGGT...................................................................................................................................................1811.001.00-------------1.00-----------------------------------------------------------------------------------
....AGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGT...................................................................................................................................................3311.001.00--------------------------------------------------------------------------------------------1.00----
.........................................................................................................................................ATGGAGGCTATGATGATT.............................1811.001.00----------------------------------------------------------------------------1.00--------------------
.........................ATGAGGCGTGGTGCTTATGGTGGAAGCT...................................................................................................................................281.000.00---1.00---------------------------------------------------------------------------------------------
...........CTGGCTTTGAGAGGATGAGG.........................................................................................................................................................2011.001.00---------------------------------------------------------------------------------1.00---------------
..............GCTTTGAGAGGATGAGGCGTGGT...................................................................................................................................................2311.001.00-------------------------------------------------1.00-----------------------------------------------
.................TTGAGAGGATGAGGCGTGGTGCTC...............................................................................................................................................241.000.00---1.00---------------------------------------------------------------------------------------------
.........AGCTGGCTTTGAGAGGATGA...........................................................................................................................................................2011.001.00--------------1.00----------------------------------------------------------------------------------
......................AGGATGAGGCGTGGTGCTTGAG............................................................................................................................................2211.003.00------------------------------------------------------------1.00------------------------------------
.GGCAGAGGAGCTGGCTTTGT...................................................................................................................................................................201.000.00-----------1.00-------------------------------------------------------------------------------------
......................AGGATGAGGCGTGGTGCTTATGGTGGAGGCT...................................................................................................................................311.000.00---1.00---------------------------------------------------------------------------------------------
....................AGAGGATGAGGCGTGGGGCC................................................................................................................................................201.000.00---1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................TGGCTATAATGATGGCTA.......1811.001.00-----------------1.00-------------------------------------------------------------------------------
.....GAGGAGCTGGCTTTGAGAGGATGAGGCGCG.....................................................................................................................................................301.000.00---1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................GATGATTACAATGGCTATAATGATG...........2511.001.00--------------------------------------1.00----------------------------------------------------------
.................................................................................................................TGATTGTACTTTGTCTTTCAGA.................................................221.000.00--1.00----------------------------------------------------------------------------------------------
.........................................................................................................TATTTGATTGATTGTACTTTGTCT.......................................................2411.001.00------------------------------------------------------------------1.00------------------------------
....AGAGGAGCTGGCTTTGAG..................................................................................................................................................................1811.001.00-----------------1.00-------------------------------------------------------------------------------
....................AGAGGATGAGGCGTGGT...................................................................................................................................................1711.001.00-------1.00-----------------------------------------------------------------------------------------
......AGGAGCTGGCTTTGAGAGGA..............................................................................................................................................................2011.001.00---------------------------------1.00---------------------------------------------------------------
.........AGCTGGCTTTGAGAGGATGAGG.........................................................................................................................................................2211.001.00----------------------1.00--------------------------------------------------------------------------
..................................................GTACGTGAGGATTCGTAAGGTTCGGCAAG.........................................................................................................2911.001.00---------------------------------------------1.00---------------------------------------------------
......AGGAGCTGGCTTTGAGAGGATGAGGCGTG.....................................................................................................................................................2911.001.00--------1.00----------------------------------------------------------------------------------------
......AGGAGCTGGCTTTGAGAGGATGAGGCG.......................................................................................................................................................2711.001.00--------------------1.00----------------------------------------------------------------------------
......AGGAGCTGGCTTTGAGGGAG..............................................................................................................................................................201.000.00---1.00---------------------------------------------------------------------------------------------
....................AGAGGATGAGGCGTGGTGCT................................................................................................................................................2011.001.00---------------------------------------------------1.00---------------------------------------------
.........AGCTGGCTTTGAGAGGA..............................................................................................................................................................1720.500.50-------0.50-----------------------------------------------------------------------------------------
......................AGGATGAGGCGTGGT...................................................................................................................................................1550.400.40---0.20----------------0.20----------------------------------------------------------------------------
.................................TGGTGCTTATGGTGGAG......................................................................................................................................1730.330.33------------------------------------------------------------------------------------------------0.33

Antisense strand
TGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGTACGTGAGGATTCGTAAGGTTCGGCAAGTCGTCTGTTCCTTTGTCTAGGTGTTTTATTTGATTGATTGTACTTTGTCTTTCAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGATTT
..................................................((((..((.((((.((........)).)))).))....(((......)))..................))))..............................................................
..................................................51..........................................................................127.......................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR040018(GSM532903)
G701N. (cervix)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR029130(GSM416759)
DLD2. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
................................................................................TAGACAAAGGAACAGACG...................................................................................... 1812.002.00-----------------------2.00-------------------------------------------------------------------------
..................................................................................................GGTGTTTTATTTGATTAA.................................................................... 182.000.00--------------------------------------------2.00----------------------------------------------------
........................TCCACCATAAGCACCACGCCTCATC....................................................................................................................................... 2511.001.00-------------------------------------------------------------------1.00-----------------------------
..........................CCACCATAAGCACCACGCCTCA........................................................................................................................................ 2211.001.00----------------------------1.00--------------------------------------------------------------------
..GCAGAGGAGCTGGCTTTA.................................................................................................................................................................... 181.000.00----------------------------------------------------1.00--------------------------------------------
.......................................................................................................................TACTTTGTCTTTCAGGAAC.............................................. 191.000.00----------------------------------------------------------------1.00--------------------------------