ID: uc003mka.1_intron_0_0_chr5_178977881_f.5p
GENE: RUFY1(1)
chr5:178977831-178978080+


(1)
AGO1.ip 		(4)
AGO2.ip 		(13)
B-CELL 		(1)
BRAIN 		(10)
BREAST 		(26)
CELL-LINE 		(6)
CERVIX 		(2)
HEART 		(3)
HELA 		(2)
LIVER 		(1)
OTHER 		(2)
RRP40.ip 		(24)
SKIN 		(1)
XRN.ip

Sense strand
GGCCGCGGGGCTGGGCGGCGGGGACAGCGGGGACGGCACGGCGCGCGCAGGTAGGCTCGGGCCGGGTCTGTCCCGCGGCGGACTCGCGTGTCCCCGCTGGCCGCCGGCGCGGGCGCGGTGGGGGCCGGGCTGGGAGGGCACTGGCCGTTCCGGGAGGTTACGCGAGCTGTTGGCGGGCGGGCGGCGCCTGGCTGCGCCTGGGTCTTTACTCCGGCGGCCCAGCCGAGACCGCCCCCCGCAGCCCCGCGTG
.....................................................(((((((.(((((((((((....))))))))).(((((((.((((((...)))))).)))))))....)).))))))).......................................................................................................................
..................................................51..............................................................................131.....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR040017(GSM532902)
G645T. (cervix)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR029125(GSM416754)
U2OS. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....CGGGGCTGGGCGGCGGGGA..................................................................................................................................................................................................................................19116.0016.00----3.002.001.00-1.00-----2.00---1.00-2.00----------------------1.00----------1.00------------1.00---------1.00-------------
............................................................................................................GCGGGCGCGGTGGGGGGGG...........................................................................................................................195.000.00-2.00-2.00--------------------1.00------------------------------------------------------------------
.............................................................................................................CGGGCGCGGTGGGGGGGG...........................................................................................................................185.000.00---1.00---------------1.00---------------------------1.00-------------1.00----------------1.00------------
........................................................TCGGGCCGGGTCTGTCCCGCGGC...........................................................................................................................................................................2315.005.001.00------1.00-------------------------------1.00----------------------1.00-----------1.00----------------
......GGGGCTGGGCGGCGGGG...................................................................................................................................................................................................................................1714.004.004.00------------------------------------------------------------------------------------------
......................................................................................................................TGGGGGCCGGGCTGGGAGGGCA..............................................................................................................2213.003.00------------------------------------------1.00-------------------------1.001.00---------------------
..........................................GCGCGCAGGTAGGCTCGGGCCGGG........................................................................................................................................................................................2412.002.00-2.00-----------------------------------------------------------------------------------------
..................................................................................................................................................GTTCCGGGAGGTTACGCGAG....................................................................................2012.002.00--------2.00----------------------------------------------------------------------------------
....................................................AGGCTCGGGCCGGGTCTGT...................................................................................................................................................................................1912.002.00--2.00----------------------------------------------------------------------------------------
.......................................................................................................................GGGGGCCGGGCTGGGAGGGC...............................................................................................................2012.002.00---------1.00--------------------------------------------------------------1.00------------------
....................................................AGGCTCGGGCCGGGTCTG....................................................................................................................................................................................1812.002.00----------1.00--------------------------------------------1.00-----------------------------------
.......................................................................................................................GGGGGCCGGGCTGGGAGGGCA..............................................................................................................2112.002.00---------2.00---------------------------------------------------------------------------------
........................CAGCGGGGACGGCACGGCG...............................................................................................................................................................................................................1911.001.00-----------------------1.00-------------------------------------------------------------------
...........................CGGGGACGGCACGGCGCGCG...........................................................................................................................................................................................................2011.001.00-----------------------------------------------------1.00-------------------------------------
........................................................TCGGGCCGGGTCTGTCCCGCG.............................................................................................................................................................................2111.001.00-----------------------------------------1.00-------------------------------------------------
.........................................................................................................................................................................TTGGCGGGCGGGCGGTCCC..............................................................191.000.00-----------------1.00-------------------------------------------------------------------------
........................................................TCGGGCCGGGTCTGTCCCGCGGTT..........................................................................................................................................................................2411.001.00--------------------------------------1.00----------------------------------------------------
........................................................TCGGGCCGGGTCTGTCCCGC..............................................................................................................................................................................2011.001.00---------------------------------------------1.00---------------------------------------------
.......................................................CTCGGGCCGGGTCTGTCCCGCGGAA..........................................................................................................................................................................251.000.00----------1.00--------------------------------------------------------------------------------
......GGGGCTGGGCGGCGGGGAAAAA..............................................................................................................................................................................................................................221.000.00----------------1.00--------------------------------------------------------------------------
...................................................................................................................................GGGAGGGCACTGGCCCCCA....................................................................................................191.000.00----------------------------------------------1.00--------------------------------------------
.GCCGCGGGGCTGGGCGCA.......................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------1.00-----------
................................................................................................................................GCTGGGAGGGCACTGGGTCT......................................................................................................201.000.00------------------------------------1.00------------------------------------------------------
...................................................................................................................................GGGAGGGCACTGGCCCAAA....................................................................................................191.000.00-----------------------------------------------------------1.00-------------------------------
....GCGGGGCTGGGCGGCGGGGTT.................................................................................................................................................................................................................................211.000.00-------------------------------------------------------------------------------------1.00-----
.....CGGGGCTGGGCGGCGGGG...................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00------------------------------
......................................CGGCGCGCGCAGGTAGGCTCGGGCC...........................................................................................................................................................................................2511.001.00----1.00--------------------------------------------------------------------------------------
.................................CGGCACGGCGCGCGCAGGTAG....................................................................................................................................................................................................2111.001.00---------------1.00---------------------------------------------------------------------------
.........................................................CGGGCCGGGTCTGTCCCGCGGC...........................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------1.00----------
.............GGCGGCGGGGACAGCGGGA..........................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00-----------------
........................CAGCGGGGACGGCACGGCT...............................................................................................................................................................................................................191.000.00-----------------------1.00-------------------------------------------------------------------
..........................................GCGCGCAGGTAGGCTCGGGCCGGGTCT.....................................................................................................................................................................................2711.001.00----------------------------------------------------------------------------------1.00--------
...CGCGGGGCTGGGCGGAGG.....................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------1.00-------------------
..............................................GCAGGTAGGCTCGGGCCGGGT.......................................................................................................................................................................................2111.001.00-------1.00-----------------------------------------------------------------------------------
...............CGGCGGGGACAGCGGGGACGG......................................................................................................................................................................................................................2111.001.00----------------------------------1.00--------------------------------------------------------
..................................................GTAGGCTCGGGCCGGGTCTGTCCCGC..............................................................................................................................................................................2611.001.00---------------------------------1.00---------------------------------------------------------
..................................................................................CTCGCGTGTCCCCGCTGG......................................................................................................................................................1811.001.00-------------------------------1.00-----------------------------------------------------------
..................................................GTAGGCTCGGGCCGGGTCTGTCCCGCGGT...........................................................................................................................................................................291.000.00---------------------------1.00---------------------------------------------------------------
....GCGGGGCTGGGCGGCGGGGAC.................................................................................................................................................................................................................................2111.001.00----------------------1.00--------------------------------------------------------------------
..............................................................CGGGTCTGTCCCGCGGCGGA........................................................................................................................................................................2011.001.00----------------------------1.00--------------------------------------------------------------
......................................CGGCGCGCGCAGGTAGGCTCGGGC............................................................................................................................................................................................2411.001.00-1.00-----------------------------------------------------------------------------------------
................................................................................GACTCGCGTGTCCCCAGAG.......................................................................................................................................................191.000.00-----------------------------------------------------------------------------------1.00-------
....................................................................................................................GGTGGGGGCCGGGCTGGGAGGGCA..............................................................................................................2411.001.00----------------------1.00--------------------------------------------------------------------
..................................................................................................................GCGGTGGGGGCCGGGCTGGGAA..................................................................................................................221.000.00------------------1.00------------------------------------------------------------------------
........................................................TCGGGCCGGGTCTGTCCCGCGGCTT.........................................................................................................................................................................2511.005.00-------------------------------------1.00-----------------------------------------------------
...........................................CGCGCAGGTAGGCTCGGGCC...........................................................................................................................................................................................2011.001.00---1.00---------------------------------------------------------------------------------------
.............................................................................................................CGGGCGCGGTGGGGGCGGCT.........................................................................................................................201.000.00---------------------------------------------------------------------------1.00---------------
........................................................TCGGGCCGGGTCTGTCCCGCGGCTAT........................................................................................................................................................................2611.005.00--1.00----------------------------------------------------------------------------------------
............................................................................................................GCGGGCGCGGTGGGGGGG............................................................................................................................181.000.00----------------1.00--------------------------------------------------------------------------
........................................................TCGGGCCGGGTCTGTCCCGCGG............................................................................................................................................................................2211.001.00---------------------------------------------------1.00---------------------------------------
..........................................GCGCGCAGGTAGGCTCGGGCCGG.........................................................................................................................................................................................2311.001.00---------------------------------------------------------------------------------------1.00---
..................................................................................................................................................................CGAGCTGTTGGCGGGCGGG.....................................................................1911.001.00---1.00---------------------------------------------------------------------------------------
............................................GCGCAGGTAGGCTCGGGCCG..........................................................................................................................................................................................2011.001.001.00------------------------------------------------------------------------------------------
...........................................................................................................................GCCGGGCTGGGAGGGCGAG............................................................................................................191.000.00------------1.00------------------------------------------------------------------------------
.........................................................................................................................................GCACTGGCCGTTCCGCGG...............................................................................................181.000.00----------------------------------------------------------------------------1.00--------------
............GGGCGGCGGGGACAGCGGGGACGG......................................................................................................................................................................................................................2411.001.00------------------------1.00------------------------------------------------------------------
...........................................................................................................................................................GGTTACGCGAGCTGTTGGCGGGCGGGCGGCGC...............................................................3211.001.00------------------------------1.00------------------------------------------------------------
........................CAGCGGGGACGGCACGGCGCGCGTT.........................................................................................................................................................................................................251.000.00---------------------------------------------------------------1.00---------------------------
.............................................................................................................CGGGCGCGGTGGGGGTGGG..........................................................................................................................191.000.00----------------------------------------------------------------------1.00--------------------
...........TGGGCGGCGGGGACAGCGGGAT.........................................................................................................................................................................................................................221.000.00--------------------------------------------------1.00----------------------------------------
.....................................................................................................................................GAGGGCACTGGCCGTTCCGGGAGGCT...........................................................................................261.000.00------------------------------------------------------------------1.00------------------------
.........GCTGGGCGGCGGGGACAGCG.............................................................................................................................................................................................................................2011.001.00----------1.00--------------------------------------------------------------------------------
..........................................GCGCGCAGGTAGGCTCGGGCC...........................................................................................................................................................................................2111.001.00----------------------------------------------------1.00--------------------------------------
..................................................GTAGGCTCGGGCCGGGT.......................................................................................................................................................................................1711.001.00-------1.00-----------------------------------------------------------------------------------
..................................................................TCTGTCCCGCGGCGGACTCG....................................................................................................................................................................2011.001.00--------------------------------1.00----------------------------------------------------------
......GGGGCTGGGCGGCGGGGAAA................................................................................................................................................................................................................................201.000.00--------------------------------------------------------1.00----------------------------------
..................................................................................................................................................................................GGGCGGCGCCTGGCTCC.......................................................171.000.00----------------------------------------1.00--------------------------------------------------
............................................................................................................................................................................................................................AGCCGAGACCGCCCCCCGCA..........2011.001.00------1.00------------------------------------------------------------------------------------
.......................................................................................................................GGGGGCCGGGCTGGGAGG.................................................................................................................1830.670.67-------------------------------------------------0.67-----------------------------------------
........................................................................................................................................................................................................................................CCCCCGCAGCCCCGCGGAC1930.330.33-----------------------------------------------------------------------------------------0.33-
.......................................................................................................................GGGGGCCGGGCTGGGAGGG................................................................................................................1930.330.33-------------------------------------------------0.33-----------------------------------------
........................................................................................................................................................................................................................................CCCCCGCAGCCCCGCG..1630.330.33------0.33------------------------------------------------------------------------------------
................................................AGGTAGGCTCGGGCC...........................................................................................................................................................................................1530.330.33---------------------------0.33---------------------------------------------------------------
........................................................................................................................................................................................................................................CCCCCGCAGCCCCGCGCCGG2030.330.33----------------------------------------------------------------------------------------0.33--
........................................................................................................................GGGGCCGGGCTGGGAGGG................................................................................................................1840.250.25-0.25-----------------------------------------------------------------------------------------
...CGCGGGGCTGGGCGGC.......................................................................................................................................................................................................................................1650.200.20------------------------------------------------------------------------------------------0.20
............................................................................................................................CCGGGCTGGGAGGGC...............................................................................................................1560.170.17-------0.17-----------------------------------------------------------------------------------
...................................................................................................GCCGCCGGCGCGGGC........................................................................................................................................1580.120.12-----------------------------0.12-------------------------------------------------------------

Antisense strand
GGCCGCGGGGCTGGGCGGCGGGGACAGCGGGGACGGCACGGCGCGCGCAGGTAGGCTCGGGCCGGGTCTGTCCCGCGGCGGACTCGCGTGTCCCCGCTGGCCGCCGGCGCGGGCGCGGTGGGGGCCGGGCTGGGAGGGCACTGGCCGTTCCGGGAGGTTACGCGAGCTGTTGGCGGGCGGGCGGCGCCTGGCTGCGCCTGGGTCTTTACTCCGGCGGCCCAGCCGAGACCGCCCCCCGCAGCCCCGCGTG
.....................................................(((((((.(((((((((((....))))))))).(((((((.((((((...)))))).)))))))....)).))))))).......................................................................................................................
..................................................51..............................................................................131.....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040007(GSM532892)
G601T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR040017(GSM532902)
G645T. (cervix)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR029125(GSM416754)
U2OS. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............CGGCGGGGACAGCGGGGGCG....................................................................................................................................................................................................................... 202.000.00-------------2.00-----------------------------------------------------------------------------
...............CGGCGGGGACAGCGGGGGCGG...................................................................................................................................................................................................................... 212.000.00-----------------------------1.00--------------1.00----------------------------------------------
............................................................................................................................................GTAACCTCCCGGAACGGCCAG......................................................................................... 2112.002.00-----2.00-------------------------------------------------------------------------------------
...............................................................................................................................................GTAACCTCCCGGAACGGC......................................................................................... 1811.001.00------------------------------------------------------------------------------------1.00------
..............................................................................................................................................................................GGGCGGGCGGCGCCTCC........................................................... 171.000.00-----------------------------------------------------------------1.00-------------------------
.....................................................................................................................................................................................................................................CGCCCCCCGCAGCCCCGCTGAA 221.000.00----------------------------------------------------------1.00--------------------------------
..CCGCGGGGCTGGGCGGCG...................................................................................................................................................................................................................................... 181.000.00-----------1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................GCCGGAGTAAAGACCCAGG................................... 1911.001.00---------------1.00---------------------------------------------------------------------------
...............CGGCGGGGACAGCGGGGG......................................................................................................................................................................................................................... 181.000.00---------------------------------------------------------1.00---------------------------------
.....CGGGGCTGGGCGGCGGGGG.................................................................................................................................................................................................................................. 191.000.00------1.00------------------------------------------------------------------------------------
...................................................................................................GCCGCCGGCGCGGGCGTA..................................................................................................................................... 181.000.00-----------1.00-------------------------------------------------------------------------------
.................................................................................................CGCCCGCGCCGGCGGCCA....................................................................................................................................... 1811.001.00-----------1.00-------------------------------------------------------------------------------
.............................................................CCGGGTCTGTCCCGCGGGT.......................................................................................................................................................................... 191.000.00------------------------------------------------1.00------------------------------------------
...................................................................................................................GCCCTCCCAGCCCGGCCCCCACCG............................................................................................................... 2411.001.00--------------------------1.00----------------------------------------------------------------
..CCGCGGGGCTGGGCGGGG...................................................................................................................................................................................................................................... 181.000.00----------------------------------------------------------------1.00--------------------------
.........................AGCGGGGACGGCACGCCC............................................................................................................................................................................................................... 181.000.00-------------------------1.00-----------------------------------------------------------------
..........................................................................................................................GGCCGGGCTGGGAGGGTCCA............................................................................................................ 201.000.00--1.00----------------------------------------------------------------------------------------
........................................................................................................................................CCCGGAACGGCCAGTGCC................................................................................................ 1811.001.00-----------------1.00-------------------------------------------------------------------------
...............CGGCGGGGACAGCGGGGGC........................................................................................................................................................................................................................ 191.000.00-----------------------------------1.00-------------------------------------------------------
...................................................................................................................CGGTGGGGGCCGGGCTCGC.................................................................................................................... 191.000.00-------------------1.00-----------------------------------------------------------------------
.....................................................................................................................GTGGGGGCCGGGCTGGGT................................................................................................................... 181.000.00--------------------------------------------------------------------------------------1.00----
.....................................................................................................................................................................................................................................CGCCCCCCGCAGCCCTGTG.. 191.000.00------------1.00------------------------------------------------------------------------------
..CCGCGGGGCTGGGCGGCGG..................................................................................................................................................................................................................................... 191.000.00---------------------1.00---------------------------------------------------------------------
..................................................................................................GGCCGCCGGCGCGGGCGGC..................................................................................................................................... 191.000.00-------------------------1.00-----------------------------------------------------------------
..CCGCGGGGCTGGGCGGCGGGG................................................................................................................................................................................................................................... 211.000.00---------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................CGGGCGGGCGGCGCCGA............................................................ 171.000.00--1.00----------------------------------------------------------------------------------------
.CCGCCCAGCCCCGCGGC........................................................................................................................................................................................................................................ 1730.330.33--------------------------0.33----------------------------------------------------------------
......................................................................................................................TCCCAGCCCGGCCCCCA................................................................................................................... 1760.170.17----------------------------0.17--------------------------------------------------------------