| (1) AGO1.ip OTHER.mut | (9) B-CELL | (4) BRAIN | (6) BREAST | (14) CELL-LINE | (2) CERVIX | (1) HEART | (2) HELA | (2) OTHER | (8) SKIN | (1) TESTES | (1) XRN.ip |
| GAGTGTTGGGCTGAGGAGCCTGGGCTGCACCCCAGGAAGGGGAGAGACAGGTTGGTCTTGGGTTGTGGAGAGTGCTGCATGGAGGCCCAGTGGGGCAGTGGCCCCTGGGGGGATGCCAAAGGCTGGTGATGTTCAGTGGCTCGTGAGGTGGAGAGGAGCAGGTGAACACGAGAGAGATTTCAGGGAGAAAGAAAAGCAGCAAGATGGGGTGAGGCGCTCAAACCAGGACGCCGAGTGGGAAAGCCAGGAGTTGGCTAGAGAAGGGTCCTGGGTGGAGGCAGGGCCAGGGAGTGTCAGGCCCAGGGTGCGCAGCTGCCCGGGGCGGGACGGGGGAGGGGCGGGAACTCATGACTCGGGGAGCCAGACTGCGATCAGACGCGCGTGCCCAGCTGAACCAGGTGCGTGAGAAGGCTGCCTTCAGGTGGCCGGGGGCTCCCTCCAGGTAGGTGTGGGCACCTTGGGCAGCCAGAACCCCAGGGAGGAAATACATGCTGCCCCCAGCCCCTGAGCTGAAGACAGGCTCCCCTCCCCCCGGCCTGCAGCTGTCTCTAGACGGAGGGACGGGAAGTGGCCAGAAGGGGAAGTGTGAGGA ...........................................................................................................................................................................................................................................................................................................................................................................................................(((((.((......((((((((..(((((.(((((((...)))))..........)).))))).)))))))).........((((((........((((....))))....(((((.......))))).))))))..)))))))..................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................392...................................................................................................................................................542................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR189784 | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR189782 | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553576(SRX182782) source: Testis. (testes) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR039191(GSM494810) PBMCs were isolated by ficoll gradient from t. (blood) | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189787 | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189783 | SRR191566(GSM715676) 94genomic small RNA (size selected RNA from t. (breast) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | TAX577740(Rovira) total RNA. (breast) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR095854(SRX039177) "miRNA were isolated from FirstChoice Human B. (brain) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | TAX577741(Rovira) total RNA. (breast) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR191560(GSM715670) 77genomic small RNA (size selected RNA from t. (breast) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR191625(GSM715735) 32genomic small RNA (size selected RNA from t. (breast) | SRR191445(GSM715555) 110genomic small RNA (size selected RNA from . (breast) | SRR040020(GSM532905) G699N_2. (cervix) | SRR039637(GSM518474) THP1_total_sRNAs. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR040015(GSM532900) G623T. (cervix) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR038852(GSM458535) QF1160MB. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCGTGAGAAGGCTG.................................................................................................................................................................................. | 18 | 1 | 10.00 | 10.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTCCCCCCGGCCTGCAG.................................................. | 20 | 1 | 4.00 | 4.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GGCGCTCAAACCAGGACGCCGAGTGGGAAA.............................................................................................................................................................................................................................................................................................................................................................. | 30 | 1 | 4.00 | 4.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................AACTCATGACTCGGGGAGCCAGACTG................................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................ACAGGTTGGTCTTGGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................................................................................................................GCCAGACTGCGATCAGACG...................................................................................................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGCCTTCAGGTC........................................................................................................................................................................ | 17 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCTCCCCTCCCGA............................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................ACAGGTTGGTCTTGGACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................................................................................................CCAGACTGCGATCAGACG...................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCTCCCTCCAGGTAGGT................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................CTTGGGTTGTGGAGATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................CCTGGGCTGCACCCCCGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..............................................ACAGGTTGGTCTTGGGTTGTGGAGAGTGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 33 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................AGAGAGATTTCAGGGAGAAAGAAAAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCGTGAGAAGGCTGCCTTCAGG.......................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................GCCAGACTGCGATCAGACGCG.................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGTCTCTAGACCAT................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................................................................................................................AGACTGCGATCAGACGCG.................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGCGTGAGAAGGC.................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................GAGGAGCAGGTGAACTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................................................................................GGGAGGGGCGGGAACTGAA................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGTGCGTGAGAAGGCTGC................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................GCCCAGGGTGCGCAGCTGC.................................................................................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TGCGATCAGACGCGCGTGCCCAGCTG........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCGTGAGAAGGCTGC................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................CAGGTGCGTGAGAAGGCTGC................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAAGGGGAAGTGTAGGG. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCGTGAGAAGGCTGCCTTCAGT.......................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..GTGTTGGGCTGAGGAGCCAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGGCACCTTGGGCAGCCAGT.......................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGGGGCTCCCTCCAGA..................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGCGTGAGAAGGCTGC................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................CTCGGGGAGCCAGACTGCGATCAGACGC..................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGCGTGAGAAGG..................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................CCGGGGCGGGACGGGGGAGGGG.............................................................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................GACTCGGGGAGCCAGACTGC............................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................CAGACTGCGATCAGACGC..................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................GCCAGACTGCGATCAGACGC..................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................GACTCGGGGAGCCAGACCGC............................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................TGCCAAAGGCTGGTGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................................GCCCAGCTGAACCAGGTG............................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................CCAGACTGCGATCAGACGC..................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................ATGACTCGGGGAGCCAGACTGCGAT............................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................CGCGTGCCCAGCTGAACCAGG................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGGTGGCCGGGT................................................................................................................................................................. | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................................................ACTCGGGGAGCCAGACTGCGAT............................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................GTGCCCAGCTGAACCAGGTG............................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAACCAGGTGCGTGAGAAGGC.................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................AGACGCGCGTGCCCAGCTGAACCAG.................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................ACTCGGGGAGCCAGACTGC............................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCACCTTGGGCATC.............................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................ACCAGGACGCCGAGTGGGAAAGCCAGGAGCTGG.................................................................................................................................................................................................................................................................................................................................................. | 33 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................GGGGCGGGACGGGGGAGCGGT............................................................................................................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................GTTGGTCTTGGGTTGTTTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGCGTGAGAAGGCTGCCCTC............................................................................................................................................................................. | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................................................................................................................................................GAGCCAGACTGCGATCAGACG...................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .AGTGTTGGGCTGAGGAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................TGAACCAGGTGCGTGA.......................................................................................................................................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .............................................................................................................................................................................................................................................................................................................................CGGGGCGGGACGGGGGAGG................................................................................................................................................................................................................................................................ | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ................................CAGGAAGGGGAGAGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................CAGGTTGGTCTTGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GTCTTGGGTTGTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GAGTGTTGGGCTGAGGAGCCTGGGCTGCACCCCAGGAAGGGGAGAGACAGGTTGGTCTTGGGTTGTGGAGAGTGCTGCATGGAGGCCCAGTGGGGCAGTGGCCCCTGGGGGGATGCCAAAGGCTGGTGATGTTCAGTGGCTCGTGAGGTGGAGAGGAGCAGGTGAACACGAGAGAGATTTCAGGGAGAAAGAAAAGCAGCAAGATGGGGTGAGGCGCTCAAACCAGGACGCCGAGTGGGAAAGCCAGGAGTTGGCTAGAGAAGGGTCCTGGGTGGAGGCAGGGCCAGGGAGTGTCAGGCCCAGGGTGCGCAGCTGCCCGGGGCGGGACGGGGGAGGGGCGGGAACTCATGACTCGGGGAGCCAGACTGCGATCAGACGCGCGTGCCCAGCTGAACCAGGTGCGTGAGAAGGCTGCCTTCAGGTGGCCGGGGGCTCCCTCCAGGTAGGTGTGGGCACCTTGGGCAGCCAGAACCCCAGGGAGGAAATACATGCTGCCCCCAGCCCCTGAGCTGAAGACAGGCTCCCCTCCCCCCGGCCTGCAGCTGTCTCTAGACGGAGGGACGGGAAGTGGCCAGAAGGGGAAGTGTGAGGA ...........................................................................................................................................................................................................................................................................................................................................................................................................(((((.((......((((((((..(((((.(((((((...)))))..........)).))))).)))))))).........((((((........((((....))))....(((((.......))))).))))))..)))))))..................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................392...................................................................................................................................................542................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR189784 | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR189782 | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553576(SRX182782) source: Testis. (testes) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR039191(GSM494810) PBMCs were isolated by ficoll gradient from t. (blood) | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189787 | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189783 | SRR191566(GSM715676) 94genomic small RNA (size selected RNA from t. (breast) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | TAX577740(Rovira) total RNA. (breast) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR095854(SRX039177) "miRNA were isolated from FirstChoice Human B. (brain) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | TAX577741(Rovira) total RNA. (breast) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR191560(GSM715670) 77genomic small RNA (size selected RNA from t. (breast) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR191625(GSM715735) 32genomic small RNA (size selected RNA from t. (breast) | SRR191445(GSM715555) 110genomic small RNA (size selected RNA from . (breast) | SRR040020(GSM532905) G699N_2. (cervix) | SRR039637(GSM518474) THP1_total_sRNAs. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR040015(GSM532900) G623T. (cervix) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR038852(GSM458535) QF1160MB. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGGACGGGAAGCCC..................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .....................GGGCTGCACCCCAGGAAGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCTGGGGGCAGCATGT....................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGACGGAGGGACGGGAAGT....................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGGCCTGCAGCTGATG............................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................CCCACTCGGCGTCCTGGTTTGAG................................................................................................................................................................................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCTCAGGGGCTGGGGG.............................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCCCGGCCTGCATGGC............................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................................................................................CCTCCCCCGTCCCGCC................................................................................................................................................................................................................................................................ | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |