ID: uc003mhc.1_intron_8_0_chr5_176918927_r
GENE: PDLIM7(4)
chr5:176918877-176919455-


(2)
AGO2.ip
(5)
B-CELL
(3)
BRAIN
(9)
BREAST
(22)
CELL-LINE
(11)
CERVIX
(7)
HEART
(1)
HELA
(1)
KIDNEY
(3)
LIVER
(2)
OTHER
(34)
SKIN
(1)
UTERUS

Sense strand
CGCTTTCCTTCTCCTCCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGTACGAGGCTGGCCGGGACATCCGGGCGGTGGGCGGTGTGGGCTTGGACGGCCAGGCCTGCTCGCCCTCCTGGCACATTCTCGGTACCCCAATCCCTGGCCGGGAGTGGAGGGCAGAAACCGGAGCTAAGGCGGGTCTAGGGCCCTGGAGTTGAGCCAGGGGCTGCTGCACGGTCCTGGCACCACGCATGTCCGCCTGTCTGTCCGCCTGTCTGTCCGCCTGCTGCCTCCCGCCGCCGGCGCTGCGTGCTCGCCCGCACTCGGTCAGCCCTCGGTCCTGCGTGGACTGAGATCGCCACTCCCAAATGGGCCCCTTGAAACCTGAGTCGTCCTCTCCCCGTAGCCTCCAAATAGATGTAGGGGGTGGGGTGGGGGTGGGGGGCTGGAGCTGCCGCTGTCCTCTGCTGCAGGCGCCCCACTTCCACCCAGGCCCCCACCTTACCCTGCCCGCCCGCCCTGCCCGGCTGTGTCTCTGCCCAGGCCTCCGCCCCCGCCGCGGACCCTCCGCGGTACACCTTTGCACCCAGCGT
.............................................................................................................................................................................................................................................................................................................................................................................................................................................(((.((((.(((.((((.........(((((.((.............(((......)))..............))))))).)))).))).))))))).....................................................
.............................................................................................................................................................................................................................................................................................................................................................................................................................................430................................................................................................529................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040039(GSM532924)
G531T. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR040034(GSM532919)
G001N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR040021(GSM532906)
G761T_2. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM416733(GSM416733)
HEK293. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR037931(GSM510469)
293GFP. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR029126(GSM416755)
143B. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR343335SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCACCC.......................................................................................................2217.007.00----1.00--------1.00--2.00--------1.00----------------1.00-------------------1.00--------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCACC........................................................................................................2116.006.00----------------------1.00-2.00-----1.00--------------------------------------1.00---1.00---------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCACCCA......................................................................................................2315.005.001.00----------------------------------1.00----1.00------1.00--------------------------------1.00--------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGCCCCACTTCCACCCAGT....................................................................................................2314.001.001.00------------1.00-----1.00--------------------------------------------------1.00------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCACCCAT.....................................................................................................2412.005.00---------------------------------1.00-------------------------------------------------1.00-----------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGCCCCACTTCCACCCAGC....................................................................................................2312.001.00-------------------1.00-----------------------------------------------------------1.00---------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGCCCCACTTCCACCCAGA....................................................................................................2312.001.00-----------------------------------------1.00--1.00--------------------------------------------------------
...............................................................................................................................................................................................................................................................GCCTGTCTGTCCGCCGCT..................................................................................................................................................................................................................................................................................................................182.000.00--------------2.00--------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCACCCAGT....................................................................................................2512.001.00------------------------------------------------------1.00----1.00-----------------------------------------
.........................................................................................................................................................................................................................GCACGGTCCTGGCACCTGCG......................................................................................................................................................................................................................................................................................................................................................201.000.00--1.00--------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCACCCAGA....................................................................................................2511.001.00-------------------------------------------------------------------1.00---------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGCCCCACTTCCACCCAG.....................................................................................................2211.001.00---------------------1.00-------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................ACTCGGTCAGCCCTCTCCG.............................................................................................................................................................................................................................................................191.000.00---------------------------------------1.00-------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCAT.........................................................................................................201.000.00---------------------------------------------------------------------------------1.00-------------------
...........................................................................GCGGTGGGCGGTGTGGAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------1.00----------------------------------------------------------------------------------------
..................................................................................................................................................TGGCCGGGAGTGGAGGGCAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------1.00---------------------------------------------------------
.......................................................................................................................................................................AACCGGAGCTAAGGCGGGTCTAGGGCCCTGGAG...........................................................................................................................................................................................................................................................................................................................................................................................3311.001.00-1.00---------------------------------------------------------------------------------------------------
.................................AGAGCAAACCGCAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------------------1.00---------------------------------------------------------------------
...........................................................................GCGGTGGGCGGTGTGGCGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00----------------------------------------------------------------------------------1.00------------------
..................................................................................................................................TCGGTACCCCAATCCCTGGCCGGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----------1.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GGCTGCTGCACGGTCGC................................................................................................................................................................................................................................................................................................................................................................171.000.00------------------------------------------------------------1.00----------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCCGCCCCCGCCTCCG...............................191.000.00--------------------------------------------------1.00--------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCTTACCCTGCCCGCC..............................................................................1911.001.00---------------------------1.00-------------------------------------------------------------------------
................................................................................................................................................................................................................................CCTGGCACCACGCATGTCCGC..............................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------1.00--------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTGTCCTCTGCTGC..........................................................................................................................1811.001.00----------------------------------------------------------------1.00------------------------------------
.......................CAGCCGGTTCAGAGCAAACCGCAGAAGGTACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3211.001.00----------------------------1.00------------------------------------------------------------------------
..................................................GTACGAGGCTGGCCGGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------1.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................................AACCGGAGCTAAGGCGGG..........................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------1.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................CCTGAGTCGTCCTCTCC.................................................................................................................................................................................................1711.001.00------------------------------------------------------------------1.00----------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGCGCCCCACTTCCACCCAGT....................................................................................................261.000.00-----------------1.00-----------------------------------------------------------------------------------
...........................................................................GCGGTGGGCGGTGTGGCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------1.00----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................TGCGTGGACTGAGATCGCC.........................................................................................................................................................................................................................................1911.001.00---------------1.00-------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................GCCTCCCGCCGCCGGCGCTGC............................................................................................................................................................................................................................................................................................2111.001.00-----1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGCCCCACTTCCACCCAGA....................................................................................................221.000.00--------1.00--------------------------------------------------------------------------------------------
................................CAGAGCAAACCGCAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------------------------------1.00---------------------------------------------------
..........................CCGGTTCAGAGCAAACCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------1.00-----------------------
............................GGTTCAGAGCAAACCGCAGAAGGTACGAGGCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3411.001.00------1.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TCGGTCCTGCGTGGACTGAGATCGCCACT......................................................................................................................................................................................................................................2911.001.00-------------------------------------1.00---------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGGCGCCCCACTTCCACCC.......................................................................................................2311.001.00-----------------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCGCCGCGGACCA...........................161.000.00--------------------------------------------------------------------1.00--------------------------------
...............................TCAGAGCAAACCGCAGAAGGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.001.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCACCCAG.....................................................................................................2411.001.001.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGCCCCACTTCCACCCA......................................................................................................2111.001.00---------------------1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCCGCCGCGGACGG...........................171.000.00-----1.00-----------------------------------------------------------------------------------------------
...............................TCAGAGCAAACCGCAGAAGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00-----------------------1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGCCCCACTTCCAAAG.......................................................................................................201.000.00------------------------------------1.00----------------------------------------------------------------
............................................................................CGGTGGGCGGTGTGGGCTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCAC.........................................................................................................2011.001.00----------1.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................CGGAGCTAAGGCGGGTCTAGGGC..................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------1.00-----------------------------
.......................................................................CCGGGCGGTGGGCGGTGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------1.00----------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGGCTGGATAG............................................................................................................................................201.000.00--------------------------------------1.00--------------------------------------------------------------
.............................................................................................................................................................................................................................................................CCGCCTGTCTGTCCGC......................................................................................................................................................................................................................................................................................................................1621.001.00-----------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGGGGTGGGGTGGGTG...........................................................................................................................................................191.000.00----------------------------------------------1.00------------------------------------------------------
..............................................................................................................................................................................................................CAGGGGCTGCTGCACGGT...................................................................................................................................................................................................................................................................................................................................................................1811.001.00------1.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCGCCCCACTTCCACCA.......................................................................................................2211.006.00----------------------------------------------------------------------------1.00------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCTGCAGGCGC....................................................................................................................1530.330.33------------------------------------------------------------------------------------------0.33----------
......................................................................................................................................................................AAACCGGAGCTAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................1540.250.25---------------------------0.25-------------------------------------------------------------------------
..CTTTCCTTCTCCTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1770.140.14-------------------------------------------------------------------------------------0.14---------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCGGACCCTCCGCG.....................1980.120.12------------------------------------------------------------------------------------------------0.12----

Antisense strand
CGCTTTCCTTCTCCTCCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGTACGAGGCTGGCCGGGACATCCGGGCGGTGGGCGGTGTGGGCTTGGACGGCCAGGCCTGCTCGCCCTCCTGGCACATTCTCGGTACCCCAATCCCTGGCCGGGAGTGGAGGGCAGAAACCGGAGCTAAGGCGGGTCTAGGGCCCTGGAGTTGAGCCAGGGGCTGCTGCACGGTCCTGGCACCACGCATGTCCGCCTGTCTGTCCGCCTGTCTGTCCGCCTGCTGCCTCCCGCCGCCGGCGCTGCGTGCTCGCCCGCACTCGGTCAGCCCTCGGTCCTGCGTGGACTGAGATCGCCACTCCCAAATGGGCCCCTTGAAACCTGAGTCGTCCTCTCCCCGTAGCCTCCAAATAGATGTAGGGGGTGGGGTGGGGGTGGGGGGCTGGAGCTGCCGCTGTCCTCTGCTGCAGGCGCCCCACTTCCACCCAGGCCCCCACCTTACCCTGCCCGCCCGCCCTGCCCGGCTGTGTCTCTGCCCAGGCCTCCGCCCCCGCCGCGGACCCTCCGCGGTACACCTTTGCACCCAGCGT
.............................................................................................................................................................................................................................................................................................................................................................................................................................................(((.((((.(((.((((.........(((((.((.............(((......)))..............))))))).)))).))).))))))).....................................................
.............................................................................................................................................................................................................................................................................................................................................................................................................................................430................................................................................................529................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040039(GSM532924)
G531T. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR040034(GSM532919)
G001N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR040021(GSM532906)
G761T_2. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM416733(GSM416733)
HEK293. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR037931(GSM510469)
293GFP. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR029126(GSM416755)
143B. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR343335SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
..........................................................................................................................................................................................................................................................................CGCCTGCTGCCTCCCCGC....................................................................................................................................................................................................................................................................................................... 183.000.00----2.00-----------------1.00------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGGACCCTCCGCGCC................... 182.000.00----------------------------------------------------1.00-------------------------1.00----------------------
.......................................................................................................................................................GGGAGTGGAGGGCAGACAG......................................................................................................................................................................................................................................................................................................................................................................................................................... 192.000.00--2.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................GCCTGTCTGTCCGCCCAGA................................................................................................................................................................................................................................................................................................................. 192.000.00-----------2.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................CGCCTGCTGCCTCCCCGCA...................................................................................................................................................................................................................................................................................................... 192.000.00-------1.00-------------------------------------------------------------------1.00-------------------------
..............................................................................................................................................................................................................................................................CGCCTGTCTGTCCGCCAGCT................................................................................................................................................................................................................................................................................................................. 202.000.00---2.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCGCCGCGGACCTTG......................... 181.000.00---------------------------------------------------------1.00-------------------------------------------
..TGGAGGAGAAGGAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1601.001.00---------1.00-------------------------------------------------------------------------------------------
.............................................................................................................GCTCGCCCTCCTGGCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00--------------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCAGGCCTCCGCCCCCGC.................................... 221.000.00-1.00---------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................TGCCTCCCGCCGCCGGC................................................................................................................................................................................................................................................................................................. 171.000.00--------------------------------------------------------------------------1.00--------------------------
.......................................................................................................................................................................................................................................................................GTCCGCCTGCTGCCTTGGC......................................................................................................................................................................................................................................................................................................... 191.000.00-1.00---------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCACCCCCACCCCAC.................................................................................................................................................... 1901.001.00---------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCCGCCCTGCCCGGTGA............................................................... 201.000.00---1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGGACCCTCCGCGC.................... 171.000.00-------1.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................CCTCCCGCCGCCGGCGTT.............................................................................................................................................................................................................................................................................................. 181.000.00----------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCCCACCTTACCCGGGG.................................................................................. 201.000.00----------------------------------1.00------------------------------------------------------------------
...............................................................................................GGACGGCCAGGCCTGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 181.000.00------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGCCCGCCCGCGG......................................................................... 171.000.00---------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................CAGCCCTCGGTCCTGCGTGGT.................................................................................................................................................................................................................................................... 211.000.00------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................TGCCTCCCGCCGCCGAAG................................................................................................................................................................................................................................................................................................ 181.000.00------------------------------------------------1.00----------------------------------------------------
.......CTTCTCCTCCAGGGCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00--------------------------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................CCCGCCGCCGGCGCTGGGA.......................................................................................................................................................................................................................................................................................... 191.000.00-----1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCAGGCCTCCGTGGA....................................... 191.000.00-----------------------1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................CTCCCGCCGCCGGCGACCA............................................................................................................................................................................................................................................................................................ 191.000.00-----------------------------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................................................................................................................TGCCTCCCGCCGCCGAGCC............................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------1.00-----------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGCCCGGCTGTGTAGG......................................................... 191.000.00-1.00---------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGGGTGGGGGTGGGGGGTCTC................................................................................................................................................ 241.000.00--------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCCCCGCCGCGGCGGG........................... 191.000.00-------------------------------------------------------------1.00---------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCCCCCGCCGCCTA.............................. 181.000.00-------------------------------------------------------1.00---------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGGCGGGGGCGG............................... 1501.001.00---------------------------------------------------------------1.00-------------------------------------
...............................................................................................................................................................................................................................................................CAGCAGGCGGACAGACAGGC................................................................................................................................................................................................................................................................................................................ 2011.001.00---------------------------------------------1.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGCGGGCGGGCA....................................................................... 1561.001.00----------------------------0.170.17-------------------------------------------------------------0.170.170.170.17------
..............................................................................................................................................................................................................................................................CGCCTGTCTGTCCGCAGT................................................................................................................................................................................................................................................................................................................... 180.800.00----------------------------------------------------------------------------------------0.400.40-----------
....................................................................................................................................................................................................................................................................................................................AGGACCGAGGGCTGACCGAG........................................................................................................................................................................................................................................................... 2020.500.50-------------------------0.50---------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................CCGGCGGCGGGAGGCA.................................................................................................................................................................................................................................................................................................. 1620.500.50------------------------------------------------------------------------------------0.50----------------
.......................................................................................................................................................................................................................................................................................................................GACCGAGGGCTGACC............................................................................................................................................................................................................................................................. 1520.500.50-------------------------------------------------------------------------------------0.50---------------
..............................................................................................................................................................................................................................................................CGCCTGTCTGTCCGCACAT.................................................................................................................................................................................................................................................................................................................. 190.400.00--------------------------------------------------------------------------------------0.40--------------
..............................................................................................................................................................................................................................................................CGCCTGTCTGTCCGCAGAA.................................................................................................................................................................................................................................................................................................................. 190.400.00---------------------------------------------------------------------------------------0.40-------------
..............................................................................................................................................................................................................................................................GCGGACAGACAGGCG...................................................................................................................................................................................................................................................................................................................... 1550.400.40------------------------------------------------------------------------------------0.40----------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGCCCGCCCTGATT.................................................................... 180.170.000.17----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................AGGACCGAGGGCTGA........................................................................................................................................................................................................................................................... 1580.120.12-----------------------------------------------------------------------------------------------0.12-----
..................................................................................................................................................................................................................................................................................GCCTCCCGCCGCCGGTG................................................................................................................................................................................................................................................................................................ 170.120.00--------------------------------------------------------------------------------------------------0.12--
..................................................................................................................................................................................................................................................................................CCGGCGGCGGGAGGC.................................................................................................................................................................................................................................................................................................. 1580.120.12------------------------------0.12----------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................GCCTCCCGCCGCCGGGA................................................................................................................................................................................................................................................................................................ 170.120.00---------------------------------------------------------------------------------------------------0.12-
..................................................................................................................................................................................................................................................................................GCCTCCCGCCGCCGGTA................................................................................................................................................................................................................................................................................................ 170.120.00-------------------------------------------------------------------------------------------------0.12---
..................................................................................................................................................................................................................................................................................GCCTCCCGCCGCCGGGCC............................................................................................................................................................................................................................................................................................... 180.120.00--------------------------0.12--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................GCCTCCCGCCGCCGGGCA............................................................................................................................................................................................................................................................................................... 180.120.00--------------------------0.12--------------------------------------------------------------------------
...................................................................................................................................................CCTCCACTCCCGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................. 1590.110.11----------------------------------------------------------------------------------------------------0.11