ID: uc003mgp.2_intron_6_0_chr5_176860412_f
GENE: (7)
chr5:176860362-176860586+


(1)
AGO2.ip 		(2)
B-CELL 		(10)
BRAIN 		(7)
BREAST 		(7)
CELL-LINE 		(3)
CERVIX 		(1)
HELA 		(8)
LIVER 		(2)
OTHER 		(3)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AAAACACCTTCAGGCAATACCGAGTCCTGGGCAAAGGTGGCTTTGGGGAGGTGAGTGGCCAGGCCAGAGCCCCTGGGAGAGTGAATAGGGTGGGTGTGTTGGGACCTGGACCACCCCCTGGATGCCCAGCAATGGCACAGCTGGCCCCCATTCGCCCCTGTCTGTCTGGCCACAGGTGTGCGCCTGCCAGGTGCGGGCCACAGGTAAGATGTATGCCTGCAAGAA
................................................................................(((....((((((((((((((((.((.((.......)).))...)))))))..(((.......)))..)))))))))..(((.....))))))....................................................
................................................................................81............................................................................................175................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577579(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040029(GSM532914)
G026T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189785TAX577739(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR040008(GSM532893)
G727N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.....................................................................................TAGGGTGGGTGTGTTAGGT.........................................................................................................................1914.000.00-3.002.00-1.00--1.001.00-----1.001.002.00-1.00-1.00------------------------
.....................................................................................TAGGGTGGGTGTGTTAGG..........................................................................................................................1812.000.00--1.002.002.002.00-1.001.00--1.00-------1.00---------1.00---------------
..............................................................................................................................................................................................................AGATGTATGCCTGCAAGA.18110.0010.009.00-----------------------------1.00--------------
.....................................................................................TAGGGTGGGTGTGTTAGGA.........................................................................................................................198.000.00-1.001.001.00-------1.00-----------1.00-------1.001.00-1.00----------
.....................................................................................TAGGGTGGGTGTGTTGGGTG........................................................................................................................2023.000.50-1.00-----0.50-0.50----------------------------0.500.50-----
.....................................................................................TAGGGTGGGTGTGTTAA...........................................................................................................................172.000.00---1.00-1.00---------------------------------------
..................ACCGAGTCCTGGGCAAAGGTG..........................................................................................................................................................................................2122.002.00------2.00--------------------------------------
.....................................................................................TAGGGTGGGTGTGTTAGT..........................................................................................................................182.000.00--------------1.00----------------------1.00-------
....................................GTGGCTTTGGGGAGGTAGAC.........................................................................................................................................................................201.000.00---------------------1.00-----------------------
.............................................................................................................................................................................................................AAGATGTATGCCTGCAAG..1811.001.001.00--------------------------------------------
......................................................................................................................................................................................CCTGCCAGGTGCGGGCCACAGGT....................2311.001.00-----------------------------------1.00---------
...........AGGCAATACCGAGTCCTGGGCA................................................................................................................................................................................................2211.001.00------------1.00--------------------------------
.....................................................................................TAGGGTGGGTGTGTTAGGG.........................................................................................................................191.000.00----------------------------1.00----------------
...........................TGGGCAAAGGTGGCTTTGGGGTT...............................................................................................................................................................................231.000.00------------1.00--------------------------------
...................................................................AGCCCCTGGGAGAGTAGC............................................................................................................................................181.000.00----------------------1.00----------------------
.................................................................................................GTTGGGACCTGGACCACC..............................................................................................................1811.001.00--------------------------1.00------------------
..........................................................................................................................................................................................CCAGGTGCGGGCCACAGGTAAGA................2311.001.00-------------------------1.00-------------------
..............................................................................................................................................................................GGTGTGCGCCTGCCAGGTGCGGGCCACAGGT....................3111.001.00-----------------1.00---------------------------
..................ACCGAGTCCTGGGCAAAGGTGGCC.......................................................................................................................................................................................241.000.00-------------1.00-------------------------------
.....................................................................................TAGGGTGGGTGTGTTAGTT.........................................................................................................................191.000.00----------1.00----------------------------------
.............GCAATACCGAGTCCTGGG..................................................................................................................................................................................................1811.001.00---------1.00-----------------------------------
..............................................................................................................................................................................................................AGATGTATGCCTGCAAGAAGTTT231.000.00----------1.00----------------------------------
.......................................................................................................................................................................................CTGCCAGGTGCGGGCGCC........................181.000.00------------------------1.00--------------------
.............................................................................................................................................................................................................AAGATGTATGCCTGCAAGA.1911.001.00------1.00--------------------------------------
.....................................................................................TAGGGTGGGTGTGTTAGGC.........................................................................................................................191.000.00---------------1.00-----------------------------
.....................................................................................TAGGGTGGGTGTGTTGGGACC.......................................................................................................................2111.001.00----1.00----------------------------------------
...........................TGGGCAAAGGTGGCTTTGGGAA................................................................................................................................................................................221.000.00------------------------------------1.00--------
....................................................................................................................................................CATTCGCCCCTGTCTGTCTGGC.......................................................2211.001.00---------------------------------1.00-----------
....................CGAGTCCTGGGCAAAGGT...........................................................................................................................................................................................1820.500.50----------------------------------------0.50----
.....................................................................................TAGGGTGGGTGTGTTGGGTCGT......................................................................................................................2220.500.50-0.50-------------------------------------------
.....................................................................................TAGGGTGGGTGTGTTGGGTGA.......................................................................................................................2120.500.50-----------------------------------------0.50---
.....................................................................................TAGGGTGGGTGTGTTGGG..........................................................................................................................1820.500.50-0.50-------------------------------------------
.....................................................................................TAGGGTGGGTGTGTTGGGT.........................................................................................................................1920.500.50-0.50-------------------------------------------
.....................................................................................TAGGGTGGGTGTGTTGGGTGGG......................................................................................................................2220.500.50---------0.50-----------------------------------
............................................................................................................................................................................................AGGTGCGGGCCACAGG.....................1630.330.33-------------------------------------------0.33-
................................................................................................TGTTGGGACCTGGAC..................................................................................................................1550.200.20--------------------------------------------0.20

Antisense strand
AAAACACCTTCAGGCAATACCGAGTCCTGGGCAAAGGTGGCTTTGGGGAGGTGAGTGGCCAGGCCAGAGCCCCTGGGAGAGTGAATAGGGTGGGTGTGTTGGGACCTGGACCACCCCCTGGATGCCCAGCAATGGCACAGCTGGCCCCCATTCGCCCCTGTCTGTCTGGCCACAGGTGTGCGCCTGCCAGGTGCGGGCCACAGGTAAGATGTATGCCTGCAAGAA
................................................................................(((....((((((((((((((((.((.((.......)).))...)))))))..(((.......)))..)))))))))..(((.....))))))....................................................
................................................................................81............................................................................................175................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577579(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040029(GSM532914)
G026T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189785TAX577739(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR040008(GSM532893)
G727N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
...............................................................................................................................................................................GTGTGCGCCTGCCAGGGA................................ 181.000.00---------------------------1.00-----------------
.........................................................................................................................................CAGCTGGCCCCCATTAGC...................................................................... 181.000.00-------------1.00-------------------------------
...........................................................CCCAGGGGCTCTGGCCTG.................................................................................................................................................... 1830.330.33------------------------------------------0.33--