ID: uc003mgo.3_intron_3_0_chr5_176830619_r
GENE: (10)
chr5:176830569-176830909-


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(13)
BREAST 		(17)
CELL-LINE 		(8)
CERVIX 		(2)
HEART 		(1)
HELA 		(12)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(26)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CTCATCGCCCCCTGCTGGGTGCTGACGGCCGCTCACTGCCTGCAGGACCGGCGAGTACCCGCCCGCCCAGAGCCGCCCCAGGGGCCGCGGCTCCTCCGTCTCCCAGCGCAGCTTCCACGCTGCACCCGAACCCGTGCCCTACCTTCTCCCGCCCCACCCTTCTTTCCACGCCCCTCCGGAGCTCCCGGGGAGGAAGCTGGAACACGGGATTGGGGTTCGGGAGCAGGGGGCTTCCCCAGAACGCTTGTGGCCAGGTCTGAGAGCGCTGCCTCTCCCCTACCCCCCCCGCAGGCCCGCACCCGAGGATCTGACGGTGGTGCTCGGCCAGGAACGCCGTAACC
..................................................(((......))).(((...(((((((((....))..)))))))..............(((((......)))))..........))).............................................................................................................................................................................................................
..................................................51.................................................................................................150.............................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		GSM532877(GSM532877)
G691N. (cervix)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577743(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR343336SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343337SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR040016(GSM532901)
G645N. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR191531(GSM715641)
134genomic small RNA (size selected RNA from . (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		TAX577741(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
........................................................................CCGCCCCAGGGGCCGCGG...........................................................................................................................................................................................................................................................18211.0011.008.50-------2.50---------------------------------------------------------------------------------
...........CTGCTGGGTGCTGACGGCCGCT....................................................................................................................................................................................................................................................................................................................2217.007.00-3.00-2.00----------------------------1.00--------------1.00------------------------------------------
.........................................................................................................................................................................................................................................................................................................................GTGGTGCTCGGCCAGGAACGC.......2115.005.00---2.00-2.00-------------------------------------------------1.00----------------------------------
..............................................................................................................................................................................................................................................................................................................AGGATCTGACGGTGGTGCT....................1915.005.00-1.002.00------1.00--------------------------------1.00-----------------------------------------------
..................................................................................................................................................................................................................................................................................CCCTACCCCCCCCGCCCCG................................................195.000.00----3.00----------------------------------------------1.00------1.00-------------------------------
....................................................................................................................................................................................................................................................................................................................TGACGGTGGTGCTCGGCCAGGAACG........2514.004.00-2.002.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................CCCTACCCCCCCCGCCCCC................................................194.000.00----4.00-------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ACGGGATTGGGGTTCGGGAGCAGGG.................................................................................................................2513.003.00-------------1.00---------------------------------------1.001.00-----------------------------------
.............GCTGGGTGCTGACGGCCGCTC...................................................................................................................................................................................................................................................................................................................2113.003.00--2.00--------------------------------------------------------1.00------------------------------
..........CCTGCTGGGTGCTGACGGCCGC.....................................................................................................................................................................................................................................................................................................................2213.003.00-------3.00----------------------------------------------------------------------------------
...........CTGCTGGGTGCTGACGGCCG......................................................................................................................................................................................................................................................................................................................2013.003.00-2.00----1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................CCCTACCCCCCCCGCCCC.................................................183.000.00----2.00------------------1.00------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................GACGGTGGTGCTCGGCCAGGAACG........2413.003.00-2.001.00---------------------------------------------------------------------------------------
..................................ACTGCCTGCAGGACCGGCCCG..............................................................................................................................................................................................................................................................................................212.000.00---2.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................ACCCGAGGATCTGACGGTGGTGC.....................2312.002.00---2.00--------------------------------------------------------------------------------------
..................................ACTGCCTGCAGGACCGGCCCGC.............................................................................................................................................................................................................................................................................................222.000.00-1.001.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGGATCTGACGGTGGTGCTCGGCCAG.............2712.002.00-----2.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................GATCTGACGGTGGTGCTCGGCCAGGAACG........2912.002.00--2.00---------------------------------------------------------------------------------------
.........................................................................CGCCCCAGGGGCCGCGGTT.........................................................................................................................................................................................................................................................1932.000.67------------------1.00-------------------------------1.00---------------------------------------
..................................ACTGCCTGCAGGACCGGCCC...............................................................................................................................................................................................................................................................................................202.000.00---2.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................TGACGGTGGTGCTCGGCCAGGAAAG........252.000.00-1.00-------1.00--------------------------------------------------------------------------------
............TGCTGGGTGCTGACGGCCGCT....................................................................................................................................................................................................................................................................................................................2112.002.00-1.001.00---------------------------------------------------------------------------------------
...........................................................................CCCCAGGGGCCGCGG...........................................................................................................................................................................................................................................................1561.831.830.33--------------------------------------------------------------0.50---------------0.170.170.170.170.17-----0.17
..................................ACTGCCTGCAGGACCGGCCAG..............................................................................................................................................................................................................................................................................................211.000.00---------------------------------------1.00--------------------------------------------------
.........................................................................................................................................................................................................................................................................CTGCCTCTCCCCTACTTAG.........................................................191.000.00------------1.00-----------------------------------------------------------------------------
..........................GGCCGCTCACTGCCTGCAGGAC.....................................................................................................................................................................................................................................................................................................2211.001.00---1.00--------------------------------------------------------------------------------------
....................................TGCCTGCAGGACCGGCCCG..............................................................................................................................................................................................................................................................................................191.000.00------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGGATCTGACGGTGGTGCT....................2011.001.00-1.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................CCCGAGGATCTGACGGTGGTG......................2111.001.00-1.00----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................GGTGGTGCTCGGCCAGGAACGT.......2211.001.00------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................CCCTACCCCCCCCGCCCA.................................................181.000.00------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................ACGGGATTGGGGTTCGGGAGCAGGGTAA..............................................................................................................2811.003.00-------------------------1.00----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................CCCCCCCGCAGGCCCGCCGCG........................................211.000.00----------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................GCTTGTGGCCAGGTCTGA.................................................................................1811.001.00----------------------------------------------------1.00-------------------------------------
...........................................................................................................................................................................................................................................................................................................CCGAGGATCTGACGGTGGTG......................2011.001.00------1.00-----------------------------------------------------------------------------------
.............GCTGGGTGCTGACGGCCGCTCAATG...............................................................................................................................................................................................................................................................................................................251.000.00-1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................TCTGACGGTGGTGCTCGGCCAGGAAAGCC......291.000.00--1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................CCCTACCCCCCCCGCC...................................................161.000.00-----------------------------1.00------------------------------------------------------------
........................................................................CCGCCCCAGGGGCCGCGGTTCC.......................................................................................................................................................................................................................................................2221.0011.00------------------------------------------------1.00-----------------------------------------
.........CCCTGCTGGGTGCTGACGGCC.......................................................................................................................................................................................................................................................................................................................2111.001.00-1.00----------------------------------------------------------------------------------------
......GCCCCCTGCTGGGTGCTGACGGCCGCTA...................................................................................................................................................................................................................................................................................................................281.000.00--1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGGATCTGACGGTGGTGC.....................1911.001.00--1.00---------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................GATCTGACGGTGGTGCTCGGCCAGGA...........2611.001.00-1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................GACGGTGGTGCTCGGCCAGGAAAG........241.000.00-----1.00------------------------------------------------------------------------------------
............................................................................................................................................................................................................CGGGATTGGGGTTCGGGAGCAGGG.................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................GGTGGTGCTCGGCCAGGAACGCTT.....241.000.00-1.00----------------------------------------------------------------------------------------
..........CCTGCTGGGTGCTGACGGCCG......................................................................................................................................................................................................................................................................................................................2111.001.00-1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................GACGGTGGTGCTCGGAAA..............181.000.00-----------------------------------1.00------------------------------------------------------
...............................................................................................................................................TTCTCCCGCCCCACCATC....................................................................................................................................................................................181.000.00----------1.00-------------------------------------------------------------------------------
.........................................................................CGCCCCAGGGGCCGCGGCAC........................................................................................................................................................................................................................................................201.000.00----------1.00-------------------------------------------------------------------------------
...................................................................................................................................................CCCGCCCCACCCTTCTGGCC..............................................................................................................................................................................201.000.00----------------------------------------1.00-------------------------------------------------
............................................................................................................................................................................................................................................................................................................CGAGGATCTGACGGTGGTGC.....................2011.001.00-1.00----------------------------------------------------------------------------------------
...............TGGGTGCTGACGGCCGCTC...................................................................................................................................................................................................................................................................................................................1911.001.00-------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................GACGGTGGTGCTCGGCCAGGAACGC.......2511.001.00---1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................TGACGGTGGTGCTCGGCCAGGAACGG.......2611.004.00--------------1.00---------------------------------------------------------------------------
...........CTGCTGGGTGCTGACGGCCGCTC...................................................................................................................................................................................................................................................................................................................2311.001.00--1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGGATCTGACGGTGGGGC.....................191.000.00--1.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................GCCAGGAACGCCGTAACCAA201.000.00--1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................GACGGTGGTGCTCGGCCAGG............2011.001.00---------1.00--------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGGATCTGACGGTGGTG......................1811.001.00--1.00---------------------------------------------------------------------------------------
............TGCTGGGTGCTGACGGCCGCTC...................................................................................................................................................................................................................................................................................................................2211.001.00-1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGGATCTGACGGTGGTGC.....................1811.001.00--1.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................CCTCTCCCCTACCCCCCCGGCC...................................................221.000.00-------------------------------1.00----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................CGCACCCGAGGATCTGAC.............................1811.001.00--------------------------------------1.00---------------------------------------------------
......................................................................................................................................................................................TCCCGGGGAGGAAGCCGGG............................................................................................................................................191.000.00------------------------1.00-----------------------------------------------------------------
.............GCTGGGTGCTGACGGCCGCT....................................................................................................................................................................................................................................................................................................................2011.001.00------1.00-----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGGATCTGACGGTGGTGCTCGGCC...............2411.001.00---1.00--------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................ATCTGACGGTGGTGCTCGGCCAGGAACGCCGT....3211.001.00-------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................CACGGGATTGGGGTTCGGGAGCAA...................................................................................................................241.000.00----------------1.00-------------------------------------------------------------------------
.............................................................................................................................................................................................................GGGATTGGGGTTCGGGTCCC....................................................................................................................2021.000.50---------------------------------------------0.50----------------------0.50---------------------
.......................................................................................................................................................................................................................................................................................................GCACCCGAGGATCTGACGGTGGT.......................2311.001.00-1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................TCTGACGGTGGTGCTCGGCC...............2011.001.00-------1.00----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGGATCTGACGGTGGTGGT....................2011.001.00--1.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................TGACGGTGGTGCTCGGCCAGGAAAGCC......271.000.00-1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................TCTGACGGTGGTGCTCGGCCAGGAAA.........261.000.00--1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................................GGAACACGGGATTGGGGTTC...........................................................................................................................2011.001.00---------------------------------------------------------1.00--------------------------------
........................................................................................................................................................................................................AACACGGGATTGGGGTTCGGGAGC.....................................................................................................................2411.001.00---------------------1.00--------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................CCCTACCCCCCCCGCCCCT................................................191.000.00---------------------1.00--------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................CTCCCCTACCCCCCCGTCC...................................................191.000.00-------------------1.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................GGATCTGACGGTGGTGCT....................1811.001.00-------1.00----------------------------------------------------------------------------------
...........CTGCTGGGTGCTGACGGCCGCTCACTGCCT............................................................................................................................................................................................................................................................................................................3011.001.00--1.00---------------------------------------------------------------------------------------
........................................................................CCGCCCCAGGGGCCGCGGT..........................................................................................................................................................................................................................................................1921.0011.00-----------------1.00------------------------------------------------------------------------
...........................................................................CCCCAGGGGCCGCGGTT.........................................................................................................................................................................................................................................................1761.001.83---------------------------------------------------------------0.17-----0.33---0.170.33---------------
........................................................................................................................TGCACCCGAACCCGTGCCC..........................................................................................................................................................................................................1911.001.00------------------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................TGACGGTGGTGCTCGGCCAGGAAAGC.......261.000.00--------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................GGTGGTGCTCGGCCAGGAACG........2111.001.00-----1.00------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................CCGAGGATCTGACGGTGGTGCT....................2211.001.00------1.00-----------------------------------------------------------------------------------
............TGCTGGGTGCTGACGGCCGG.....................................................................................................................................................................................................................................................................................................................201.000.00-1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................GACGGTGGTGCTCGGCCAGGA...........2111.001.00-1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................GTGGTGCTCGGCCAGGAACG........2011.001.00-----1.00------------------------------------------------------------------------------------
.........................................................................CGCCCCAGGGGCCGCGGTA.........................................................................................................................................................................................................................................................1931.000.67---------------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................................CCCTACCCCCCCCGCCACG................................................191.000.00-----------------------1.00------------------------------------------------------------------
........................................................................CCGCCCCAGGGGCCGAGG...........................................................................................................................................................................................................................................................181.000.001.00-----------------------------------------------------------------------------------------
...........CTGCTGGGTGCTGACGGCC.......................................................................................................................................................................................................................................................................................................................1911.001.00--1.00---------------------------------------------------------------------------------------
........................................................................CCGCCCCAGGGGCCGCGGTTC........................................................................................................................................................................................................................................................2121.0011.00-----------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................CCCGCACCCGAGGATCTGACGG...........................2211.001.00-----------1.00------------------------------------------------------------------------------
...........................................................................CCCCAGGGGCCGCGGTTC........................................................................................................................................................................................................................................................1860.831.83---------------------------------------------------------------0.17-------0.17-0.17----------0.17-0.17---
.........................................................................CGCCCCAGGGGCCGCGG...........................................................................................................................................................................................................................................................1730.670.670.33---------------------------------------------------------------------------0.33-------------
........................................................................CCGCCCCAGGGGCCGCG............................................................................................................................................................................................................................................................1720.500.50--------0.50---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GTGCTCGGCCAGGAAC.........1620.500.50-------------------------------------------------------------------0.50----------------------
.............................................................................................................................................................................................................GGGATTGGGGTTCGG.........................................................................................................................1520.500.50---------------------------------------------0.50--------------------------------------------
.............................................................................................................................................................................................................GGGATTGGGGTTCGGG........................................................................................................................1620.500.50----------------------------------------------------------------0.50-------------------------
...........................................................................CCCCAGGGGCCGCGGT..........................................................................................................................................................................................................................................................1660.501.83---------------------------------------------------------------------0.17-------0.17-------0.17----
.................................................................................................................................................................................................................................................................................CCCCTACCCCCCCCG.....................................................1530.330.33------------------------------------------------------------------------0.33-----------------
.........................................................................CGCCCCAGGGGCCGCG............................................................................................................................................................................................................................................................1640.250.25------------------------------------------------------------------------------0.25-----------
.............................................................................CCAGGGGCCGCGGCT.........................................................................................................................................................................................................................................................1550.200.20-----------------------------------------------------------------------0.20------------------
..........................................................................GCCCCAGGGGCCGCGG...........................................................................................................................................................................................................................................................1660.170.17---------------------------------------------------------------------------------------0.17--
..........................................................................GCCCCAGGGGCCGCGGT..........................................................................................................................................................................................................................................................1760.170.17----------------------------------------------------------------------------------------0.17-
.........................................................................CGCCCCAGGGGCCGC.............................................................................................................................................................................................................................................................1580.120.12-----------------------------------------------------------------------------0.12------------

Antisense strand
CTCATCGCCCCCTGCTGGGTGCTGACGGCCGCTCACTGCCTGCAGGACCGGCGAGTACCCGCCCGCCCAGAGCCGCCCCAGGGGCCGCGGCTCCTCCGTCTCCCAGCGCAGCTTCCACGCTGCACCCGAACCCGTGCCCTACCTTCTCCCGCCCCACCCTTCTTTCCACGCCCCTCCGGAGCTCCCGGGGAGGAAGCTGGAACACGGGATTGGGGTTCGGGAGCAGGGGGCTTCCCCAGAACGCTTGTGGCCAGGTCTGAGAGCGCTGCCTCTCCCCTACCCCCCCCGCAGGCCCGCACCCGAGGATCTGACGGTGGTGCTCGGCCAGGAACGCCGTAACC
..................................................(((......))).(((...(((((((((....))..)))))))..............(((((......)))))..........))).............................................................................................................................................................................................................
..................................................51.................................................................................................150.............................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		GSM532877(GSM532877)
G691N. (cervix)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577743(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR343336SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343337SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR040016(GSM532901)
G645N. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR191531(GSM715641)
134genomic small RNA (size selected RNA from . (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		TAX577741(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
..............................................................................................................................................................................................................................................................................................................................GCTCGGCCAGGAACGGC...... 1717.000.0015.00-------2.00---------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................CTGCCTCTCCCCTACATGA......................................................... 194.000.00---------------2.00------2.00-------------------------------------------------------------------
..................................................................GGCCCCTGGGGCGGCTCTGG............................................................................................................................................................................................................................................................... 2012.002.00--------------------2.00---------------------------------------------------------------------
....................................................................................CCGCGGCTCCTCCGTCTGCCG............................................................................................................................................................................................................................................ 211.000.00------------------------------------------------------------1.00-----------------------------
...........................................................................................................................ACCCGAACCCGTGCCCTAA....................................................................................................................................................................................................... 191.000.00----------------1.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................GAGAGCGCTGCCTCTCCG................................................................. 181.000.00----------------------------------1.00-------------------------------------------------------
............................................................................................................................................................................................................................................................................................GGGTGCGGGCCTGCGGG........................................ 1711.001.00-------------------------------------1.00----------------------------------------------------
..........................................................................................AAGCTGCGCTGGGAGACGGAGGAG................................................................................................................................................................................................................................... 2411.001.00------------------------------------1.00-----------------------------------------------------
....GCACCCAGCAGGGGGCGA............................................................................................................................................................................................................................................................................................................................... 1811.001.00-----------------------------------------1.00------------------------------------------------
......................................................................................................................................................GCCCCACCCTTCTTTTGA............................................................................................................................................................................. 181.000.00--------------------------------------------------------1.00---------------------------------
................................................................................................................................................................TCTTTCCACGCCCCTCC.................................................................................................................................................................... 171.000.00------------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................TTCCACGCCCCTCCGTAG................................................................................................................................................................ 181.000.00--------------------------------------------1.00---------------------------------------------
.............................................................................................................................................................GGAGGGGCGTGGAAAGAAGG.................................................................................................................................................................... 2011.001.00----------------------------1.00-------------------------------------------------------------
..........................................................................................................................................CTACCTTCTCCCGCCTATG........................................................................................................................................................................................ 191.000.00---------------------------1.00--------------------------------------------------------------
........................................................................................................................................................................................................................................................................................CCCCCCCGCAGGCCCGCAC.......................................... 191.000.00-------------------------------------------------1.00----------------------------------------
..................................................................................................................................................................................................................................................................................CCCTACCCCCCCCGCTCC................................................. 181.000.001.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................CCCCGCAGGCCCGCACCCTGC..................................... 211.000.00----------------------------------------------1.00-------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GCTCGGCCAGGAACGG....... 161.000.001.00-----------------------------------------------------------------------------------------
.....................CAGTGAGCGGCCGTCAG............................................................................................................................................................................................................................................................................................................... 1711.001.00-------------------------------------------1.00----------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GCTCGGCCAGGAACGGG...... 171.000.001.00-----------------------------------------------------------------------------------------
........................................................................................................................................GGCGGGAGAAGGTAGGG............................................................................................................................................................................................ 1711.001.00--------------------------1.00---------------------------------------------------------------
............................................................................................................................................................AGGGGCGTGGAAAGAAGGG...................................................................................................................................................................... 1911.001.00--------------------------------------------------------------1.00---------------------------
......................................................GTACCCGCCCGCCCAAG.............................................................................................................................................................................................................................................................................. 171.000.00-------------------------------------------------------------1.00----------------------------
...............................................................................................................................................................................................................................................................................................................................CTCGGCCAGGAACGCTGA.... 181.000.00-------------------1.00----------------------------------------------------------------------
...........................................................................................CGTGGAAGCTGCGCTGGGAGACGGAGGA.............................................................................................................................................................................................................................. 2811.001.00-----------1.00------------------------------------------------------------------------------
.......................................................CTGGGCGGGCGGGTA............................................................................................................................................................................................................................................................................... 1520.500.50----------------------------------------------------------------------0.50-------------------
........................................................................................................CGTGGAAGCTGCGCT.............................................................................................................................................................................................................................. 1520.500.50------------------------------------------------------------------0.50-----------------------
..............................................................................................................................................................................................................................................................................................GGGTGCGGGCCTGCG........................................ 1520.500.50-----------------------------------------------------------------0.50------------------------
..............................................................................................................................................GGGTGGGGCGGGAGAAG...................................................................................................................................................................................... 1730.330.33---------------------------------------------------------------------------0.33--------------