ID: uc003lzv.2_intron_21_0_chr5_167894970_f.3p
GENE: (22)
chr5:167895756-167896005+


(1)
AGO2.ip
(2)
BRAIN
(1)
BREAST
(3)
CELL-LINE
(1)
CERVIX
(1)
LIVER
(4)
OTHER
(1)
SKIN

Sense strand
GCAATGAGCTTACGTTTTGGGTTGTCATAACTGGAGGTCAAGGATACAGCCAGCATCTAGAGGGTAAGAGGCCAAGGACGTTGCTAAACATTCTGCAGCGAATGTATAGGACAGCTCCCACGACAAAGAATTATCCTGCCCAGAATCTCTGTAGAGCGAGGTTGAAAACCCCTGCTCTAAAGGGATGGCCTCTCTTATAGGGAGAAGATGGCATTTTTCACCCGGCCTCGGATGAATATCCCAGCTCTCT
.........................................................................................................................................(((....((((((.(((((((.(((.....)))..))))))).))))))))).............................................................
......................................................................................................................119..............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR189785SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
...........................................................................................................................CAAAGAATTATCCTGTTG.............................................................................................................1851.000.0051.00------------
...........................................................................................................................CAAAGAATTATCCTGTTT.............................................................................................................1810.000.0010.00------------
...........................................................................................................................CAAAGAATTATCCTGTAG.............................................................................................................187.000.007.00------------
...........................................................................................................................CAAAGAATTATCCTGTAT.............................................................................................................183.000.003.00------------
...........................................................................................................................CAAAGAATTATCCTGTGG.............................................................................................................182.000.002.00------------
..........................................................................................................................ACAAAGAATTATCCTTTTG.............................................................................................................192.000.002.00------------
...........................................................................................................................CAAAGAATTATCCTGTTGG............................................................................................................191.000.00----1.00--------
...........................................................................................................................CAAAGAATTATCCTGTTCT............................................................................................................191.000.00---1.00---------
...............................................................................................................................................................................TCTAAAGGGATGGCCTCTCTT......................................................2111.001.00-----1.00-------
...........................................................................................................................................................................................................GAAGATGGCATTTTTCACCCGGC........................2311.001.00-1.00-----------
................................................................................................................................................................................................................................GCCTCGGATGAATATCC.........1711.001.00----------1.00--
............................AACTGGAGGTCAAGGATACAG.........................................................................................................................................................................................................2111.001.00------------1.00
...........................................................................................................................CAAAGAATTATCCTGTAC.............................................................................................................181.000.001.00------------
..................................................................................................................................TTATCCTGCCCAGAAAACG.....................................................................................................191.000.00--1.00----------
............................................................................................................................................................................................................................CCCGGCCTCGGATGAGCCA...........191.000.00--------1.00----
...........................................................................................................................CAAAGAATTATCCTGCCG.............................................................................................................181.000.001.00------------
.................................................................AAGAGGCCAAGGACGTTG.......................................................................................................................................................................1811.001.00-------1.00-----
.....................................................................................................................................................................................................TAGGGAGAAGATGGCGGT...................................181.000.00-----------1.00-
...........................................................................................................................CAAAGAATTATCCTGTA..............................................................................................................171.000.001.00------------
...........................................................................................................................CAAAGAATTATCCTGTCG.............................................................................................................181.000.001.00------------
...................................................................GAGGCCAAGGACGTTTTT.....................................................................................................................................................................181.000.00---------1.00---

Antisense strand
GCAATGAGCTTACGTTTTGGGTTGTCATAACTGGAGGTCAAGGATACAGCCAGCATCTAGAGGGTAAGAGGCCAAGGACGTTGCTAAACATTCTGCAGCGAATGTATAGGACAGCTCCCACGACAAAGAATTATCCTGCCCAGAATCTCTGTAGAGCGAGGTTGAAAACCCCTGCTCTAAAGGGATGGCCTCTCTTATAGGGAGAAGATGGCATTTTTCACCCGGCCTCGGATGAATATCCCAGCTCTCT
.........................................................................................................................................(((....((((((.(((((((.(((.....)))..))))))).))))))))).............................................................
......................................................................................................................119..............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR189785SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
...................................................................................................................................................................GAAAACCCCTGCTCTCCGA.................................................................... 191.000.00------1.00------