ID: uc003lvx.3_intron_2_0_chr5_154271303_r.3p
GENE: GEMIN5(25)
chr5:154271253-154271502-


(1)
AGO2.ip
(4)
BRAIN
(1)
BREAST
(5)
CELL-LINE
(1)
HEART
(2)
LIVER
(3)
OTHER
(1)
SKIN
(1)
XRN.ip

Sense strand
AGAACACTGTCGCAAGCCAGGAAATGTTTAGCCTCCAGTTGGCTCTTGGTGGAAAGGCATGTGGCCCGGTGGATCACACTGTTGTCCTTTTTCCTGGGGTCTGCTTCTTGGTTGATAAGAAATAGAACATAAGGGCAGGAAGCCACATTTCTGGCAACTAGAGAAATGCATGACCCAGTATCTTTTTCCTCTTTTCCTAGGCTGTGACCACCTAAGAGACAAGTTGGGGGACCATCAATCCCCTGCCACA
..............................................................................((.((((((((.....((...((((.((((((.....)))))).)))).)).))))))))..))............................................................................................................
..........................................................................75..................................................................143.........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189782SRR038852(GSM458535)
QF1160MB. (cell line)
SRR189784SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189787
..........................................................................................................................TAGAACATAAGGGCATC...............................................................................................................17183.000.00183.00----------------
.................................................................................................................................................................................................................ACCTAAGAGACAAGTTGGGGGACCAT...............2613.003.00--3.00--------------
..................................................................................................................................................................................................................CCTAAGAGACAAGTTGGGGGA...................2112.002.00----2.00------------
...............................................................................TGTTGTCCTTTTTCCTTAG........................................................................................................................................................191.000.00-1.00---------------
..........................................................................CACACTGTTGTCCTTTTG..............................................................................................................................................................181.000.00-1.00---------------
..............................................TGGTGGAAAGGCATGAACG.........................................................................................................................................................................................191.000.00------------1.00----
.....................................................................................................................................................................................................................................GACCATCAATCCCCTGCC...1811.001.00-----1.00-----------
...............................................................................TGTTGTCCTTTTTCCTTTG........................................................................................................................................................191.000.00---1.00-------------
..........................................................................................................................................................................................................TGTGACCACCTAAGAACGT.............................191.000.00---1.00-------------
......................................................................................................................................................................................................AGGCTGTGACCACCTAAGAGACAAGTTGGG......................3011.001.00------1.00----------
..................................................................CGGTGGATCACACTGC........................................................................................................................................................................161.000.00----------1.00------
..............................................................................................................................................................................................................ACCACCTAAGAGACAAGT..........................1820.500.50-----0.50-----------
.......................................................................................................................................................................................................................GAGACAAGTTGGGGG....................1580.120.12----------------0.12

Antisense strand
AGAACACTGTCGCAAGCCAGGAAATGTTTAGCCTCCAGTTGGCTCTTGGTGGAAAGGCATGTGGCCCGGTGGATCACACTGTTGTCCTTTTTCCTGGGGTCTGCTTCTTGGTTGATAAGAAATAGAACATAAGGGCAGGAAGCCACATTTCTGGCAACTAGAGAAATGCATGACCCAGTATCTTTTTCCTCTTTTCCTAGGCTGTGACCACCTAAGAGACAAGTTGGGGGACCATCAATCCCCTGCCACA
..............................................................................((.((((((((.....((...((((.((((((.....)))))).)))).)).))))))))..))............................................................................................................
..........................................................................75..................................................................143.........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189782SRR038852(GSM458535)
QF1160MB. (cell line)
SRR189784SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189787
..........................................................................................................................................................................................................................................TCAATCCCCTGCCACAATAG 203.000.00-3.00---------------
.........................................................................................................................................................................................................................................ATCAATCCCCTGCCACACAG 202.000.00-2.00---------------
.........................................................................................................................................................................................................................................TGTGGCAGGGGATTGAT 1711.001.00-----------1.00-----
.........................................................................................................................................................................................................................................ATCAATCCCCTGCCACTG 181.000.00-1.00---------------
..........................................................................................................................................................................................................................................TCAATCCCCTGCCACAAAAC 201.000.00-1.00---------------
.........................................................................................................................................................................................................................................ATCAATCCCCTGCCACATAG 201.000.00-1.00---------------
..........................................................................................................................................GAAGCCACATTTCTGGAAC............................................................................................. 191.000.00---------1.00-------
..........................................................................................................................................................................................................................................TCAATCCCCTGCCACAACGG 201.000.00-1.00---------------
.........................................................................................................................................................................................................................................ATCAATCCCCTGCCACACTGT 211.000.00--------1.00--------
.........................................................................................................................................................................................................................................ATCAATCCCCTGCCACATTGT 211.000.00-------------1.00---
..........................................................................................................................................................................................................................................TCAATCCCCTGCCACAAGAG 201.000.00-1.00---------------
.....................................................................................................................................................................................GAAAAGAGGAAAAAG...................................................... 1501.001.00--------------1.00--
.................................................................................................................................................................AGAAATGCATGACCCAGAG...................................................................... 191.000.00-1.00---------------
........................................................................ATCACACTGTTGTCCAAGT............................................................................................................................................................... 191.000.00-------1.00---------
..........................................................................................................TTTCTTATCAACCAAG................................................................................................................................ 1660.170.17---------------0.17-