| (1) B-CELL | (1) BRAIN | (8) CELL-LINE | (1) CERVIX | (1) HEART | (1) HELA | (2) LIVER | (2) OTHER | (5) SKIN |
| TTGTATACCTGTATCCTAGTTTATGTAGCCAGTCCTTTGATTTGTTTTCACTTCCCATTACAAAAAGGACTATAGTGTATATCCTTGCACTTTTATCTTAGCAAGCCTTTATGAGTCTATTAGCTTTTACCTCAAAATTTTAAGCCAGAACTATCATCTTTGTTTTTTTATTTTCTATCTTTAAACATTTATCTGTGAAGTGACAAATGGCCTACAGCTGTGAGAGCAAATGGACATCTCCTCCTGAACT ..............................................................((((((((...((((((......))))))...................((((.(((....((((...............)))).)))....))))....))))))))................................................................................. ............................................45.................................................................................................................................176........................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343337 | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR343334 | SRR189784 | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR343336 | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR189785 | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR040025(GSM532910) G613T. (cervix) | GSM359178(GSM359178) hela_nucl_t. (hela) | SRR343335 | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................AACTATCATCTTTGTTTTTTTATT.............................................................................. | 24 | 1 | 48.00 | 48.00 | 48.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACTATCATCTTTGTTT..................................................................................... | 17 | 3 | 10.33 | 10.33 | 10.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TCATCTTTGTTTTTTTATTTTCTACCT...................................................................... | 27 | 4.00 | 0.00 | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................TCATCTTTGTTTTTTTATTTTCTACCTT..................................................................... | 28 | 3.00 | 0.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................AACTATCATCTTTGTTTTTTCATT.............................................................................. | 24 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................ACTTCCCATTACAAATAG....................................................................................................................................................................................... | 18 | 3.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ....................................................................................................................................................AACTATCATCTTTGTTTTTTTACT.............................................................................. | 24 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................TTTTTTTATTTTCTATCTTTAAACATTTATCTG....................................................... | 33 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TGTAGCCAGTCCTTTGATTTGTCTTC......................................................................................................................................................................................................... | 26 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................ATCATCTTTGTTTTTTTATTTTCTATCTC..................................................................... | 29 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................TTTTTTTATTTTCTATCTTTAAACATTTATCCG....................................................... | 33 | 2.00 | 0.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................CTGTGAGAGCAAATGGACA.............. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACTATCATCTTTGTTTTTTGATA.............................................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................TTGCACTTTTATCTTAGCA................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................ATCATCTTTGTTTTTTTATTTTCTACCT...................................................................... | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................CAAATGGCCTACAGCTGTGAGAGCAAATGGAC............... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................ATATCCTTGCACTTTCAG.......................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................CAAATGGCCTACAGCTGTGAGAGCAAATGTACA.............. | 33 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................ATCATCTTTGTTTTTTTATTTTCTATC....................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TCTATTAGCTTTTACCTCAAAATTTCAAG.......................................................................................................... | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................TTTTTATTTTCTATCTTTGGTG................................................................ | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................GTGAGAGCAAATGGACATCTCCTCCT..... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................ACTTCCCATTACAAATAGA...................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................TTATTTTCTATCTTTACG................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................AATTTTAAGCCAGAACTATCATA............................................................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ..........................................................................................................................................................................................................................TGTGAGAGCAAATGGACAT............. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................TTTTTTTATTTTCTATCTTTAAACATTTATCCT....................................................... | 33 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................TTTTATTTTCTATCTTTAAACATTTATCTG....................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................CAGCTGTGAGAGCAAATGGACATCTC.......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................ATTACAAAAAGGACTATAGTGTA........................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................................................................................TTTTTTATTTTCTATCTTTAAACATTTATC......................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............CCTAGTTTATGTAGCCAGTCC....................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................AGCAAATGGACATCTCCCCTG..... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................ATGGCCTACAGCTGTGAGAGC....................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................TCATCTTTGTTTTTTTATTTTCTACC....................................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................AACTATCATCTTTGTTTTTTTTT............................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................TTTTTTTATTTTCTATCTTTAAACATTTATCT........................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................ATCTTTGTTTTTTTATTCATT.......................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................TACAGCTGTGAGAGCAAATGG................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................AACTATCATCTTTGTTTTTTTATC.............................................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................ACTATCATCTTTGTTTTTTTATTTTCTATCTC..................................................................... | 32 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................CTACAGCTGTGAGAGCAAATGG................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TTTGTTTTTTTATTTTCATG........................................................................ | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................AACTATCATCTTTGTCC..................................................................................... | 17 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................ACTATCATCTTTGTTT..................................................................................... | 16 | 7 | 0.14 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TTGTATACCTGTATCCTAGTTTATGTAGCCAGTCCTTTGATTTGTTTTCACTTCCCATTACAAAAAGGACTATAGTGTATATCCTTGCACTTTTATCTTAGCAAGCCTTTATGAGTCTATTAGCTTTTACCTCAAAATTTTAAGCCAGAACTATCATCTTTGTTTTTTTATTTTCTATCTTTAAACATTTATCTGTGAAGTGACAAATGGCCTACAGCTGTGAGAGCAAATGGACATCTCCTCCTGAACT ..............................................................((((((((...((((((......))))))...................((((.(((....((((...............)))).)))....))))....))))))))................................................................................. ............................................45.................................................................................................................................176........................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343337 | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR343334 | SRR189784 | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR343336 | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR189785 | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR040025(GSM532910) G613T. (cervix) | GSM359178(GSM359178) hela_nucl_t. (hela) | SRR343335 | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................TTTTTTTATTTTCTATGGG..................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................ATCTCCTCCTGAACTTTT | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ..............................................................................................................................................ACAAAGATGATAGTTCTGGCT....................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTTAAACATTTATCTGTTAG................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |