ID: uc003ldc.3_intron_9_0_chr5_137878626_r
GENE: (1)
chr5:137878576-137878835-


(2)
AGO2.ip 		(14)
B-CELL 		(3)
BRAIN 		(11)
BREAST 		(31)
CELL-LINE 		(22)
CERVIX 		(2)
HEART 		(3)
HELA 		(5)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(30)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
AGCCGCCGCCGGGGAGGAGCAGCCGCTGCCGCCCAGGACTGGGCCCTTAGGTAAGGCACAGGGAGGGAAAGGCCGGTGACCTTTGTGGCGAGCTGCACCGGACGGGAGGAGAGGGCCTCTGGGGGATGGCGAGGAAGGGGGCCGCTCTGCCCCAGCGGCGGCGCTAACTCTGTGGTCTTGGTGTCTCCGGGCCCCGCCGGGCCGCTCTAGGGAGGAGGAGGCGAGAAGATGGCGGACGACCCCAGTGCTGCCGACAGGAA
.....................................................((((...............((((((..(((......)))...)))))).............))))..............................................................................................................................................
..................................................51..................................................................119...........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR040037(GSM532922)
G243T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR040028(GSM532913)
G026N. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR038855(GSM458538)
D10. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR040034(GSM532919)
G001N. (cervix)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532890(GSM532890)
G576T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR040017(GSM532902)
G645T. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040030(GSM532915)
G013N. (cervix)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR189786SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR343335SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................ACCGGACGGGAGGAGAGGG.................................................................................................................................................19119.0019.009.00---1.001.001.00-4.00-----------1.00-------------1.00-------------------------------------------------1.00------------------------------------------
.GCCGCCGCCGGGGAGGAG.................................................................................................................................................................................................................................................1827.507.50--1.50------------------------------0.50-------1.001.00-0.50-----------------------------------1.00-----------------------------0.500.50-0.500.50------------
.......GCCGGGGAGGAGCAGCCG...........................................................................................................................................................................................................................................1817.007.00----------------1.00---------1.00----------------1.001.00---1.00---------1.00---------------1.00----------------------------------------------------
..............................................................................................................................................................................................................................GAGAAGATGGCGGACGAC....................1814.004.00-------------------2.00-----------------------------------1.00----------------------------------1.00------------------------------------
.................................................................................................CCGGACGGGAGGAGAGG..................................................................................................................................................1713.003.00-1.00-------------2.00---------------------------------------------------------------------------------------------------------------
...CGCCGCCGGGGAGGAGCAGC.............................................................................................................................................................................................................................................2013.003.00-----------------3.00-------------------------------------------------------------------------------------------------------------
...........................GCCGCCCAGGACTGGGCC.......................................................................................................................................................................................................................1813.003.00---------3.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GAAGATGGCGGACGACCCCATC..............223.000.00------------3.00------------------------------------------------------------------------------------------------------------------
.GCCGCCGCCGGGGAGGAGCAG..............................................................................................................................................................................................................................................2112.002.00----------------2.00--------------------------------------------------------------------------------------------------------------
.................................CAGGACTGGGCCCTTAGGTA...............................................................................................................................................................................................................2012.002.00------2.00------------------------------------------------------------------------------------------------------------------------
..................................AGGACTGGGCCCTTAGG.................................................................................................................................................................................................................1712.002.00---------------------------1.00---1.00-----------------------------------------------------------------------------------------------
.GCCGCCGCCGGGGAGGTGG................................................................................................................................................................................................................................................192.000.00----------------------------------------------1.00-------------------1.00------------------------------------------------------------
................................................................................................ACCGGACGGGAGGAGAGG..................................................................................................................................................1812.002.00----------------------------------1.00----------------------------------------------1.00---------------------------------------------
................................................................................................ACCGGACGGGAGGAGAGGGCCTC.............................................................................................................................................2312.002.00----1.00---------------------------------1.00----------------------------------------------------------------------------------------
..................................AGGACTGGGCCCTTAGGGAGG.............................................................................................................................................................................................................2112.002.00---2.00---------------------------------------------------------------------------------------------------------------------------
.........CGGGGAGGAGCAGCCGCT.........................................................................................................................................................................................................................................1812.002.00-----------------------------------2.00-------------------------------------------------------------------------------------------
....................................................AAGGCACAGGGAGGGAAAGGCCGG........................................................................................................................................................................................2412.002.00----1.00---------1.00----------------------------------------------------------------------------------------------------------------
............................................................................................CTGCACCGGACGGGAGGAGAG...................................................................................................................................................2112.002.00-1.00------------------1.00----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................GACCCCAGTGCTGCCGAC.....1812.002.00------------------------2.00------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GAAGATGGCGGACGACCCC.................1912.002.00----------------------------------------------------------------------------------1.00---------1.00----------------------------------
.GCCGCCGCCGGGGAGGCG.................................................................................................................................................................................................................................................182.000.00------------------------------------------------------------------------------1.00-------1.00----------------------------------------
................................................................................................ACCGGACGGGAGGAGAGGGC................................................................................................................................................2012.002.00----------------------2.00--------------------------------------------------------------------------------------------------------
................................................................................................ACCGGACGGGAGGAGAGGGCCT..............................................................................................................................................2212.002.00------------------------------------------------------------1.00------------1.00-----------------------------------------------------
....................................................................................GTGGCGAGCTGCACCGGACGG...........................................................................................................................................................2112.002.00-------2.00-----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AGGGAGGAGGAGGCGAGAAGT...............................211.000.00----------------------------------------------------1.00--------------------------------------------------------------------------
............................................................................................................................GATGGCGAGGAAGGGCTT......................................................................................................................181.000.00------------------------------------------------------------------------------------------------------1.00------------------------
..............................................................................................GCACCGGACGGGAGGAGAGGG.................................................................................................................................................2111.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------
................................................................................................ACCGGACGGGAGGAGAGGGCCTCTGG..........................................................................................................................................2611.001.00-----------------------------------------------------------------------------------------------------1.00-------------------------
................................................................................................ACCGGACGGGAGGAGAG...................................................................................................................................................1711.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................................................................GGGCCCCGCCGGGCCCG.......................................................171.000.00-----------------------------1.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................................................TGTGGTCTTGGTGTCTGTTG......................................................................201.000.00-----------------------------------------------------------------------------------------------------------1.00-------------------
............................................................................................................................................................................................GGGCCCCGCCGGGCCCGG......................................................181.000.00---------------------------------------------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................................................TCCGGGCCCCGCCGGGCCGCT......................................................2111.001.00----------------------------------------1.00--------------------------------------------------------------------------------------
..........................................................CAGGGAGGGAAAGGCCG.........................................................................................................................................................................................1711.001.00----------------------------1.00--------------------------------------------------------------------------------------------------
...................................................................................................GGACGGGAGGAGAGGGCCTCTGGGGGATGGC..................................................................................................................................3111.001.00--------------------------------------------------------------1.00----------------------------------------------------------------
................................................................................................................................................................................................................AGGGAGGAGGAGGCGAGTAA................................201.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------
.....CCGCCGGGGAGGAGCAGCCG...........................................................................................................................................................................................................................................2011.001.00----------1.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GAAGATGGCGGACGACC...................1711.001.00-----------------------------------------------------------------------------1.00-------------------------------------------------
..................................................................................................CGGACGGGAGGAGAGGGC................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------------------------1.00---------------------
.................................................................................................CCGGACGGGAGGAGAGGGCCTCTG...........................................................................................................................................2411.001.00------------------------------------------------------------------------1.00------------------------------------------------------
.................................................................................................................................................................................................................................AAGATGGCGGACGACCCC.................1811.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------
...............................................................................................CACCGGACGGGAGGAGAGGG.................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------1.00----------------------
...............................CCCAGGACTGGGCCCTTAG..................................................................................................................................................................................................................1911.001.00--------------1.00----------------------------------------------------------------------------------------------------------------
....................................................AAGGCACAGGGAGGGAAAGG............................................................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------
.....................GCCGCTGCCGCCCAGGACTG...........................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------1.00-------------------------------
.....................................................................AGGCCGGTGACCTTTGTGGCGAGA.......................................................................................................................................................................241.000.00--------------------------------------------------------1.00----------------------------------------------------------------------
..........................................................................................................................................................................................................CGCTCTAGGGAGGAGGAGG.......................................1911.001.00--------------------------1.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................GCGGACGACCCCAGTGCTGCC........2111.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------
.............................................................................................................................................................................................................................CGAGAAGATGGCGGAAGAG....................191.000.00---------------------------------------------------------------------------1.00---------------------------------------------------
........................................................................................................................................................................................................................................CGGACGACCCCAGTGCTGCCGACAGG..2611.001.00-------------1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GGCGGACGACCCCAGTG.............1711.001.00--------------------------------------------------------------------------------------------------1.00----------------------------
..................................................................................................CGGACGGGAGGAGAGGGCCTCTGGGGG.......................................................................................................................................2711.001.00-------------------------------------------------1.00-----------------------------------------------------------------------------
..CCGCCGCCGGGGAGGAGC................................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------------------1.00---------------------------
........................GCTGCCGCCCAGGACTGGGCCCTTAG..................................................................................................................................................................................................................2611.001.00--------------------------------------------------1.00----------------------------------------------------------------------------
..................................AGGACTGGGCCCTTAGGT................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------------------1.00-----------------------------
..................................AGGACTGGGCCCTTAGGTA...............................................................................................................................................................................................................1911.001.00---------------------------------------------1.00---------------------------------------------------------------------------------
...................................................................................................................................AGGAAGGGGGCCGCTCTG...............................................................................................................1811.001.00---------------------------------------1.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................GGGCCCCGCCGGGCCCGGG.....................................................191.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GGAGGCGAGAAGATGGCGG.........................1911.001.00---1.00---------------------------------------------------------------------------------------------------------------------------
...CGCCGCCGGGGAGGAGCAG..............................................................................................................................................................................................................................................1911.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------
....GCCGCCGGGGAGGAGCAGCCG...........................................................................................................................................................................................................................................2111.001.00------------------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................CCCCAGCGGCGGCGCTAACTCTGT.......................................................................................2411.001.00-------1.00-----------------------------------------------------------------------------------------------------------------------
..............................GCCCAGGACTGGGCCCTTAGGTAAGGCACAG.......................................................................................................................................................................................................3111.001.00---------------------------1.00---------------------------------------------------------------------------------------------------
...........................................................................................GCTGCACCGGACGGGAGGAA.....................................................................................................................................................201.000.00-----------------------------------------------------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................................................................GATGGCGGACGACCCCAGTG.............2011.001.00-------------------------------------------------------------------1.00-----------------------------------------------------------
............................................................GGGAGGGAAAGGCCGTTAG.....................................................................................................................................................................................191.000.00---------------------------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GGGAGGAGGAGGCGAGCCG................................191.000.00-----------------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................................................AGGAGGCGAGAAGATGGCGGACG......................2311.001.00---------------------------------------------------------------------------------------------1.00---------------------------------
.............................................................................................................................................................................................................................CGAGAAGATGGCGGACGACCCC.................2211.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGGAGGAGGCGAGAAGATG.............................1911.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------
................................................................................................ACCGGACGGGAGGAGAGGGCC...............................................................................................................................................2111.001.00------------------------------------------------------------------------------------------------1.00------------------------------
.................AGCAGCCGCTGCCGCCCAGGACTGGGCCCC.....................................................................................................................................................................................................................301.000.00-------------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................CCGGACGGGAGGAGAGGGCCT..............................................................................................................................................2111.001.00---------------------------------------1.00---------------------------------------------------------------------------------------
....GCCGCCGGGGAGGAGCAGC.............................................................................................................................................................................................................................................1921.001.00------------------0.50--------------0.50---------------------------------------------------------------------------------------------
................................................................................................................................GCGAGGAAGGGGGCCGCTC.................................................................................................................1911.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CGAGAAGATGGCGGACGATT...................201.000.00--------------------------------1.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................AGAAGATGGCGGACGACCCCAGTGCTGCCGACAGGA.3611.001.00---1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GAAGATGGCGGACGACCC..................1811.001.00-------------------------------------------------------------------------------------------1.00-----------------------------------
...........................................................AGGGAGGGAAAGGCCGGT.......................................................................................................................................................................................1811.001.00---------------------1.00---------------------------------------------------------------------------------------------------------
.................................................................................................CCGGACGGGAGGAGAGGGCC...............................................................................................................................................2011.001.00----1.00--------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CGGACGACCCCAGTGCTGCCGAC.....2311.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------
...........................................................................GTGACCTTTGTGGCGAGCTG.....................................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GGCGAGAAGATGGCGAAG.......................181.000.00--1.00----------------------------------------------------------------------------------------------------------------------------
........CCGGGGAGGAGCAGCCG...........................................................................................................................................................................................................................................1711.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................CCGGGCCCCGCCGGGCCCGGG.....................................................211.000.00----------------------------------------------------------------------------------------------------------1.00--------------------
........................................................................................................................GGGGGATGGCGAGGAAGGGGGC......................................................................................................................2211.001.00----------------------------------------1.00--------------------------------------------------------------------------------------
.......................................TGGGCCCTTAGGTAAGGCAC.........................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------1.00-------------------------------------
..................................................................................................CGGACGGGAGGAGAGGGCAA..............................................................................................................................................2011.001.00--------------------------------1.00----------------------------------------------------------------------------------------------
......CGCCGGGGAGGAGCAGCCGCTG........................................................................................................................................................................................................................................2211.001.00----------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GAGGAGGAGGCGAGAAGATGGCG..........................2311.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------
......CGCCGGGGAGGAGCAGCCGCT.........................................................................................................................................................................................................................................2111.001.00----------1.00--------------------------------------------------------------------------------------------------------------------
..............................................................................................................................TGGCGAGGAAGGGGGCCGCTC.................................................................................................................2111.001.00-----------------------------------------------------------1.00-------------------------------------------------------------------
....................................................................................GTGGCGAGCTGCACCGGACG............................................................................................................................................................2011.001.00----------------------------------------------------------------------------------------1.00--------------------------------------
...............................................................................................................AGGGCCTCTGGGGGATGTCCA................................................................................................................................211.000.00------------------------------------1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GAAGATGGCGGACGAGAG..................181.000.00------------------------------------------------------1.00------------------------------------------------------------------------
...................................................................................................................................................................................................................................GATGGCGGACGACCCCAG...............1811.001.00--------------1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GGGAGGAGGAGGCGACAGT................................191.000.00----------------------------------------------------------------------------------------------------1.00--------------------------
.......................................................................GCCGGTGACCTTTGTGGC...........................................................................................................................................................................1811.001.00---------------------1.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GATGGCGGACGACCCCAGTGCTGCCGAC.....2811.001.00-------------------------------1.00-----------------------------------------------------------------------------------------------
..................................................GTAAGGCACAGGGAGAAAA...............................................................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
.GCCGCCGCCGGGGAGGAGCA...............................................................................................................................................................................................................................................2011.001.00--1.00----------------------------------------------------------------------------------------------------------------------------
.GCCGCCGCCGGGGAGGCGCA...............................................................................................................................................................................................................................................201.000.00--1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................TTGTGGCGAGCTGCACCGGA..............................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------
...........................GCCGCCCAGGACTGGGCCCTTAGGTAAGGC...........................................................................................................................................................................................................3011.001.00---------------1.00---------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CTCTAGGGAGGAGGACAC......................................181.000.00-----------------------------------------1.00-------------------------------------------------------------------------------------
.......GCCGGGGAGGAGCAGCGAGC.........................................................................................................................................................................................................................................201.000.00-------------1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................AGGAGGCGAGAAGATGGCGG.........................2011.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------
........................................................CACAGGGAGGGAAAGGCCGG........................................................................................................................................................................................2011.001.00-------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................ATGGCGGACGACCCCAGTGCTGCCGACAGG..3011.001.00------------------------------------1.00------------------------------------------------------------------------------------------
...........................................................................................GCTGCACCGGACGGGAGG.......................................................................................................................................................1811.001.00------1.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................TGGCGAGGAAGGGGGGCTT...................................................................................................................191.000.00-------------------------------------------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................GCTCTGCCCCAGCGGACCA..................................................................................................191.000.00----------------------------------------------------------------------------1.00--------------------------------------------------
................................CCAGGACTGGGCCCTTAG..................................................................................................................................................................................................................1820.500.50----0.50--------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CGGACGACCCCAGTG.............1520.500.50---------0.50---------------------------------------------------------------------------------------------------------------------
..CCGCCGCCGGGGAGG...................................................................................................................................................................................................................................................1590.330.33-----------------------------------------------------------------------------------------------------------------------0.22-----0.11-
..........................................................................................................................................................................................CCGGGCCCCGCCGGGC..........................................................1630.330.33-------------------------------------------------------------------------------------------------------------0.33-----------------
..........................................................................................................AGGAGAGGGCCTCTGGGG........................................................................................................................................1830.330.33---------------------------------------------0.33---------------------------------------------------------------------------------
.........................................................................................................GAGGAGAGGGCCTCTGGG.........................................................................................................................................1840.250.25--------------------------------------------------------------------------------------------------------------------0.25----------
..CCGCCGCCGGGGAGGTGG................................................................................................................................................................................................................................................1890.220.33----------------------------------------------0.22--------------------------------------------------------------------------------
...........................................................................................................................................................................................CGGGCCCCGCCGGGC..........................................................1560.170.17--------------------------------------------------------------------------------------------------------------------------0.17----
..........GGGGAGGAGCAGCCGC..........................................................................................................................................................................................................................................1660.170.17-------------------------------------------------------------------------------------------------------------------------0.17-----
..........................................................................................................................................................................................CCGGGCCCCGCCGGG...........................................................1560.170.17------------------------------------------------------------------------------------------------------------------------0.17------
...................................................................................................................................................................................................................GAGGAGGAGGCGAGAA.................................1670.140.14---------------------------------------------------------------------------------------------------------------------------0.14---
...................................................................................................................CCTCTGGGGGATGGC..................................................................................................................................1590.110.11------------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
AGCCGCCGCCGGGGAGGAGCAGCCGCTGCCGCCCAGGACTGGGCCCTTAGGTAAGGCACAGGGAGGGAAAGGCCGGTGACCTTTGTGGCGAGCTGCACCGGACGGGAGGAGAGGGCCTCTGGGGGATGGCGAGGAAGGGGGCCGCTCTGCCCCAGCGGCGGCGCTAACTCTGTGGTCTTGGTGTCTCCGGGCCCCGCCGGGCCGCTCTAGGGAGGAGGAGGCGAGAAGATGGCGGACGACCCCAGTGCTGCCGACAGGAA
.....................................................((((...............((((((..(((......)))...)))))).............))))..............................................................................................................................................
..................................................51..................................................................119...........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR040037(GSM532922)
G243T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR040028(GSM532913)
G026N. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR038855(GSM458538)
D10. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR040034(GSM532919)
G001N. (cervix)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532890(GSM532890)
G576T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR040017(GSM532902)
G645T. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040030(GSM532915)
G013N. (cervix)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR189786SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR343335SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
..............AGGAGCAGCCGCTGCATTT................................................................................................................................................................................................................................... 192.000.00------------------------------1.00-------------------------------------1.00----------------------------------------------------------
..............................................................................................................................................................................................GCCCCGCCGGGCCGCAGCA................................................... 191.000.00--1.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................CCGGGCCCCGCCGGGCCGGG...................................................... 2031.000.00-------------------------------------------------------------------------------------------------------1.00-----------------------
.GCCGCCGCCGGGGAGGAGG................................................................................................................................................................................................................................................ 1921.000.00---------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................CTGCCCCAGCGGCGGCGG................................................................................................ 181.000.00--------------------------------------1.00----------------------------------------------------------------------------------------
..................GCAGCCGCTGCCGCCCAGGA.............................................................................................................................................................................................................................. 201.000.00----------------------------------------------------------------1.00--------------------------------------------------------------
............................................................................................................................................................................................GGGCCCCGCCGGGCCGCCGGC................................................... 211.000.00-----------------------------1.00-------------------------------------------------------------------------------------------------
.............GAGGAGCAGCCGCTGCTTT.................................................................................................................................................................................................................................... 191.000.00------------------------------1.00------------------------------------------------------------------------------------------------
.............GAGGAGCAGCCGCTGCTTTT................................................................................................................................................................................................................................... 201.000.00-----------------------------------------------------------------------------------1.00-------------------------------------------
............................................................................................................................................................................................................................................CTGTCGGCAGCACTGGGGTCG... 2111.001.00-------------------------------------------------------------------------------1.00-----------------------------------------------
........................................................................................................................................GGGGGCCGCTCTGCCCCG.......................................................................................................... 181.000.00-------------------------------------------------------------------------------------1.00-----------------------------------------
...................................................................................................................................................................................................CCCTAGAGCGGCCCGGC................................................ 1711.001.00----------------------------------------------------------------------------------------------1.00--------------------------------
...........................................................AGGGAGGGAAAGGCCGGCCGC.................................................................................................................................................................................... 211.000.00----------------------------1.00--------------------------------------------------------------------------------------------------
.GCCGCCGCCGGGGAGGAGG................................................................................................................................................................................................................................................ 191.000.00------------------1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................TCCTGTCGGCAGCACTG. 1711.001.00----------------------------------------------------------------------1.00--------------------------------------------------------
..........................................................................................................................................................................................CCGGGCCCCGCCGGGCGC........................................................ 1861.000.00---------------------------------------------------------------1.00---------------------------------------------------------------
.GCCGCCGCCGGGGAGGAGGG............................................................................................................................................................................................................................................... 201.000.00---------------------------------------------------------------------------------------1.00---------------------------------------
...........................................................................................................................................................................................CGGGCCCCGCCGGGCCGCCG..................................................... 201.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CCCCCAGAGGCCCTCTCCTC....................................................................................................................................... 2030.670.67------------------------------------------------------------------------------------------------------------0.67------------------
...............................................................................................................................................................................................................................................TCGGCAGCACTGGGG...... 1540.500.50----------------------------------------------------------------------------------------------------------------0.50--------------
............................................................................................................................................CTGGGGCAGAGCGGC......................................................................................................... 1540.500.50-------------------------------------------------------------------------------------------------------------0.25-------0.25---------
............................................................................................................................................GCCGCTCTGCCCCAGAAG...................................................................................................... 180.250.00----------------------------------------------------------------------------------------------------------------------0.25--------
............................................................................................................CCCCAGAGGCCCTCTC........................................................................................................................................ 1680.120.12----------------------------------------------------------------------------------------------------------------------------0.12--