ID: uc003ldc.3_intron_8_0_chr5_137854557_r.5p
GENE: (2)
chr5:137878322-137878571-


(3)
AGO2.ip 		(3)
B-CELL 		(3)
BREAST 		(18)
CELL-LINE 		(4)
CERVIX 		(4)
HEART 		(3)
LIVER 		(2)
OTHER 		(16)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
GAGATCTGGAAGATCAAGAAGCTCATTAAGAGCTTGGAGGCGGCCCGCGGGTGAGCGCCGCGTCCGGCACCCTCCGTGCCCTCTTGGTTCCCGGACCCCTCAGGATGGACGCCCCCGCGCCGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGGTAGTAGCCCCTGACCCAGGGGCGAGGGTCGGCGCGGTTGGCCCGAGAAGGGGTCCTTTCCCCGCATGGGGG
..................................................(((.((((.(((((((((((.....))))).((((((((....))))....)))).))))))....)))))))..(((.(((...((....)).(((....)))...))).))).(((((....))))).......................................................................
..................................................51...................................................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR040043(GSM532928)
G428T. (cervix)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR038862(GSM458545)
MM472. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................GGGTGAGCGCCGCGTGG.........................................................................................................................................................................................17139.001.0029.007.00----1.00----1.00-------1.00-----------------------------------
...............................................CGGGTGAGCGCCGCGTGG.........................................................................................................................................................................................18119.002.007.004.001.00--1.00-1.00--1.00---1.00-------1.00---1.00-----------1.00----------------
...............................................CGGGTGAGCGCCGCG............................................................................................................................................................................................1528.508.502.50--------1.50----------0.50--1.00------------------0.500.50-0.500.500.500.50------
...............................................CGGGTGAGCGCCGCGTGGG........................................................................................................................................................................................1917.002.003.00-1.00-------1.00----------1.00---------1.00-----------------------
................................................GGGTGAGCGCCGCGTGGG........................................................................................................................................................................................1815.001.003.00-1.00-------------------------------1.00--------------------
...............................................CGGGTGAGCGCCGCGTG..........................................................................................................................................................................................1714.002.00--1.00------1.00--2.00------------------------------------------
.......................CATTAAGAGCTTGGAGGCGGCCCGCGG........................................................................................................................................................................................................2713.003.00----------------2.00---------------1.00----------------------
..........................TAAGAGCTTGGAGGCAAAA.............................................................................................................................................................................................................193.000.00---------------2.00--1.00------------------------------------
...............................................CGGGTGAGCGCCGCGT...........................................................................................................................................................................................1612.002.00--1.00---1.00------------------------------------------------
................................................GGGTGAGCGCCGCGTGTG........................................................................................................................................................................................1812.001.00-----1.00-----------1.00-------------------------------------
...........................AAGAGCTTGGAGGCGGCCCGCGGCA......................................................................................................................................................................................................2512.001.00----2.00--------------------------------------------------
..................................................................................................................................................................CCTTCTGGATCTCTGGCA......................................................................181.000.00--------1.00----------------------------------------------
........................................................GCCGCGTCCGGCACCGGG................................................................................................................................................................................181.000.00-----------------------------------1.00-------------------
................................................GGGTGAGCGCCGCGTAG.........................................................................................................................................................................................1711.001.001.00------------------------------------------------------
..................................................................................................................................................................CCTTCTGGATCTCTGGGAA.....................................................................191.000.00--------1.00----------------------------------------------
............................AGAGCTTGGAGGCGGCCCGCGGCA......................................................................................................................................................................................................241.000.00----1.00--------------------------------------------------
...........................AAGAGCTTGGAGGCGGCCCGCGGGCG.....................................................................................................................................................................................................261.000.00----1.00--------------------------------------------------
...............................................CGGGTGAGCGCCGCGTGCG........................................................................................................................................................................................1911.002.00---1.00---------------------------------------------------
....TCTGGAAGATCAAGAAGCTCATT...............................................................................................................................................................................................................................2321.001.00-------------1.00-----------------------------------------
...ATCTGGAAGATCAAGAAGCT...................................................................................................................................................................................................................................2011.001.00-------------1.00-----------------------------------------
...................................................................................................................CGCGCCGCATGGCCGGATGAT..................................................................................................................211.000.00---1.00---------------------------------------------------
..GATCTGGAAGATCAAGAAGC....................................................................................................................................................................................................................................2011.001.00------------------1.00------------------------------------
................................................GGGTGAGCGCCGCGT...........................................................................................................................................................................................1511.001.00------------------------------1.00------------------------
....TCTGGAAGATCAAGAAGC....................................................................................................................................................................................................................................1821.001.00----------0.50---------------------------------------0.50----
.........................................................................................................................GCATGGCCGGATGAGGAGAACCAGGC.......................................................................................................2611.001.00--------1.00----------------------------------------------
........................................................................................................................................................................................GCCCCTGACCCAGGGGCGAGGGTCG.........................................2511.001.00----------------------------------------1.00--------------
...........................AAGAGCTTGGAGGCGGCCCGCGG........................................................................................................................................................................................................2311.001.00------------------------1.00------------------------------
......TGGAAGATCAAGAAGCTCAT................................................................................................................................................................................................................................2021.001.00--------------------------------------------0.50----0.50-----
................................................GGGTGAGCGCCGCGTG..........................................................................................................................................................................................1611.001.00--------------------1.00----------------------------------
...................................................................................................................CGCGCCGCATGGCCGGATGAG..................................................................................................................2111.001.00---1.00---------------------------------------------------
............................................................................................................................TGGCCGGATGAGGAGAACCAGGCAC.....................................................................................................2511.001.00---------------------------------------1.00---------------
................................................GGGTGAGCGCCGCGTGGT........................................................................................................................................................................................1811.001.00-----1.00-------------------------------------------------
...............................................CGGGTGAGCGCCGCGTGGGG.......................................................................................................................................................................................2011.002.00----------------------------1.00--------------------------
...................................................................................................................................ATGAGGAGAACCAGGCACTAGCCAA..............................................................................................2511.001.00---------------------------------1.00---------------------
................................................GGGTGAGCGCCGCGTGT.........................................................................................................................................................................................1711.001.001.00------------------------------------------------------
...........................................................................................................................ATGGCCGGATGAGGAGA..............................................................................................................1711.001.00--------------1.00----------------------------------------
...............................................CGGGTGAGCGCCGCGTTG.........................................................................................................................................................................................1811.002.00-----------------1.00-------------------------------------
...................................GGAGGCGGCCCGCGGCAAT....................................................................................................................................................................................................191.000.00-------------------------1.00-----------------------------
............................AGAGCTTGGAGGCGGCCCGCGGGCGAG...................................................................................................................................................................................................271.000.00-----------------------------1.00-------------------------
...............................................................................................................................CCGGATGAGGAGAACC...........................................................................................................1611.001.00------1.00------------------------------------------------
...ATCTGGAAGATCAAGAAGCTCATT...............................................................................................................................................................................................................................2411.001.00-------1.00-----------------------------------------------
.......................CATTAAGAGCTTGGAGGCG................................................................................................................................................................................................................1920.500.50-------------------0.50-----------------------------------
.....CTGGAAGATCAAGAAGCTCATT...............................................................................................................................................................................................................................2220.500.50-------0.50-----------------------------------------------
....TCTGGAAGATCAAGAAGCTC..................................................................................................................................................................................................................................2020.500.50-----------------------------------------0.50-------------
.......GGAAGATCAAGAAGCTCAT................................................................................................................................................................................................................................1920.500.50---------------------------------------------------0.50---
......TGGAAGATCAAGAAGCTCATT...............................................................................................................................................................................................................................2120.500.50-------0.50-----------------------------------------------
................AGAAGCTCATTAAGAGC.........................................................................................................................................................................................................................1720.500.50----0.50--------------------------------------------------
........GAAGATCAAGAAGCTC..................................................................................................................................................................................................................................1630.330.33-----------------------------------------0.33-------------
..................................................................................................................................................................................................CAGGGGCGAGGGTCG.........................................1530.330.33----------------------------------------------------0.33--
.....CTGGAAGATCAAGAAG.....................................................................................................................................................................................................................................1640.250.25-----------------------------------------------------0.25-
..................AAGCTCATTAAGAGC.........................................................................................................................................................................................................................1580.120.12----0.12--------------------------------------------------

Antisense strand
GAGATCTGGAAGATCAAGAAGCTCATTAAGAGCTTGGAGGCGGCCCGCGGGTGAGCGCCGCGTCCGGCACCCTCCGTGCCCTCTTGGTTCCCGGACCCCTCAGGATGGACGCCCCCGCGCCGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGGTAGTAGCCCCTGACCCAGGGGCGAGGGTCGGCGCGGTTGGCCCGAGAAGGGGTCCTTTCCCCGCATGGGGG
..................................................(((.((((.(((((((((((.....))))).((((((((....))))....)))).))))))....)))))))..(((.(((...((....)).(((....)))...))).))).(((((....))))).......................................................................
..................................................51...................................................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR040043(GSM532928)
G428T. (cervix)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR038862(GSM458545)
MM472. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................GTCCGGGAACCAAGAGGGCACGG.......................................................................................................................................................... 2312.002.00---2.00---------------------------------------------------
..................................................................................................................................................AAGGCGGGAGTTGGCTAGTG.................................................................................... 2011.001.00------------------------------------1.00------------------
.....................................................................................................................................................ACCCAGAGATCCAGAAGGCGGGAGTTGGCTA...................................................................... 3111.001.00---------------------------1.00---------------------------
.......................................................................................................................................GGAGAACCAGGCACTGGC................................................................................................. 181.000.00-----------1.00-------------------------------------------
............................................................................................................ACGCCCCCGCGCCGCTGTG........................................................................................................................... 191.000.00-------------------------------------1.00-----------------
........................................................................................................................................CTAGTGCCTGGTTCTC.................................................................................................. 1640.250.25------------------------------------------------------0.25