| (1) AGO2.ip | (4) B-CELL | (3) BRAIN | (6) BREAST | (32) CELL-LINE | (3) CERVIX | (1) FIBROBLAST | (4) HEART | (3) HELA | (1) KIDNEY | (4) LIVER | (1) OTHER | (10) SKIN | (1) TESTES | (1) XRN.ip |
| AAGCAAAGGCAGAAATCACCAGGCTCATAAAAGAAGAGCTGATCCGGCTGGTGAGTGAAAACCTTAAAGTTTCGTTTGTTTTGTTTTAATAAGTGTTTTATTGAAATATAAATACAGAGAAGTACTCAAATCATAAACATATAGTTTGATGAATTTTCACAAAGTAATAAGCATACCAGTGTAGTCACTACCCAGATCAAGAAATAAAAAACATTACTAATATCCCAGAAGTCTTCTCTGTGTCTATTCT ............................................................................(((((((((((((((((...)))))))))))).)))))........................................................................................................................................ ...........................................................60.....................................................115..................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037937(GSM510475) 293cand2. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029127(GSM416756) A549. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR553574(SRX182780) source: Heart. (Heart) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR553575(SRX182781) source: Kidney. (Kidney) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR038861(GSM458544) MM466. (cell line) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR015446(SRR015446) smallRNAs high-throughput sequencing Total. (breast) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR029126(GSM416755) 143B. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR040043(GSM532928) G428T. (cervix) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | TAX577745(Rovira) total RNA. (breast) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR029125(GSM416754) U2OS. (cell line) | SRR040018(GSM532903) G701N. (cervix) | SRR029124(GSM416753) HeLa. (hela) | SRR037936(GSM510474) 293cand1. (cell line) | SRR444068(SRX128916) Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330857(SRX091695) tissue: skin psoriatic involveddisease state:. (skin) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR038858(GSM458541) MEL202. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR553576(SRX182782) source: Testis. (testes) | TAX577579(Rovira) total RNA. (breast) | SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR038863(GSM458546) MM603. (cell line) | SRR191585(GSM715695) 196genomic small RNA (size selected RNA from . (breast) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR029131(GSM416760) MCF7. (cell line) | SRR040024(GSM532909) G613N. (cervix) | SRR038856(GSM458539) D11. (cell line) | SRR191632(GSM715742) 78genomic small RNA (size selected RNA from t. (breast) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189784 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................TAAAGTTTCGTTTGTAAA........................................................................................................................................................................ | 18 | 2 | 25.50 | 11.00 | 10.50 | 4.50 | - | 1.00 | - | 0.50 | 0.50 | - | - | 0.50 | - | - | - | 0.50 | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | 0.50 | - | - | 0.50 | 0.50 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTAAAA....................................................................................................................................................................... | 19 | 2 | 21.50 | 11.00 | 7.50 | 2.00 | - | 2.50 | 0.50 | - | - | - | 2.00 | 1.00 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | 1.00 | - | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | 0.50 | 0.50 | - | - | - | 0.50 | - | - | 0.50 | - | - |
| ................................................................TAAAGTTTCGTTTGT........................................................................................................................................................................... | 15 | 2 | 11.00 | 11.00 | - | - | - | - | - | 3.50 | 2.00 | - | - | - | - | - | - | 0.50 | - | 1.00 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTAA......................................................................................................................................................................... | 17 | 2 | 9.00 | 11.00 | - | 6.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | 0.50 | - | - | - | - | 0.50 | - | - | - |
| ...............................AGAAGAGCTGATCCGGCT......................................................................................................................................................................................................... | 18 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTACA........................................................................................................................................................................ | 18 | 2 | 2.50 | 11.00 | 1.00 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTTAA........................................................................................................................................................................ | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................AAAGTTTCGTTTGTTAAA....................................................................................................................................................................... | 18 | 2.00 | 0.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................GTTTCGTTTGTTTTGTTTTGTAG............................................................................................................................................................... | 23 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................TCATAAAAGAAGAGCTGATCCGG........................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................TAAAAGAAGAGCTGATCCGGCTGC....................................................................................................................................................................................................... | 24 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................ATAAAAGAAGAGCTGATCCGGCTGT....................................................................................................................................................................................................... | 25 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TAAAGTTTCGTTTGTAGAA....................................................................................................................................................................... | 19 | 2 | 1.50 | 11.00 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TTAAAGTTTCGTTTGTAAA........................................................................................................................................................................ | 19 | 2 | 1.50 | 0.50 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................GGCTCATAAAAGAAGAGCTGATCCGGC.......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................AAAAGAAGAGCTGATCCG............................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTTG......................................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................AAGAAGAGCTGATCCGGCTGCCA..................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TTTCGTTTGTTTTGTTTGGTT................................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................AAAGAAGAGCTGATCCGGCTGC....................................................................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................CATAAAAGAAGAGCTGATCCGG........................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................AAAGTTTCGTTTGTTAAAA...................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................TTTCGTTTGTTTTGTTCGTC................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................TTAAAGTTTCGTTTGTAA......................................................................................................................................................................... | 18 | 2 | 1.00 | 0.50 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TCATAAAAGAAGAGCTGAT............................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TTCGTTTGTTTTGTTTTAGTTT.............................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................AAAGTTTCGTTTGTTACAA...................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................CACCAGGCTCATAAAAGAAGAGCTGATCCGGCTGC....................................................................................................................................................................................................... | 35 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................AGAAGTCTTCTCTGTCAA...... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................ATAAAAGAAGAGCTGATCCT............................................................................................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................AAGAAGAGCTGATCCGGCTG........................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................GGCTCATAAAAGAAGAGCTGATCCTG........................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................TTAAAGTTTCGTTTGTTCAAC...................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................AAAGTTTCGTTTGTTGAA....................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................TTTCGTTTGTTTTGTTTTGCGG............................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................TGTTTTATTGAAATAATG........................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TAAAGTTTCGTTTGTA.......................................................................................................................................................................... | 16 | 2 | 1.00 | 11.00 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TTTCGTTTGTTTTGTTTCTAC................................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................AAGAAGAGCTGATCCGGCT......................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................AAAAGAAGAGCTGATCCGGCTGCAAA.................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................AGAGCTGATCCGGCTGCAAA.................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................AGCTGATCCGGCTGGTGTGGT................................................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................TAAAGTTTCGTTTGTACAA....................................................................................................................................................................... | 19 | 2 | 1.00 | 11.00 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTGCA........................................................................................................................................................................ | 18 | 2 | 0.50 | 11.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTCAA........................................................................................................................................................................ | 18 | 2 | 0.50 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTCG......................................................................................................................................................................... | 17 | 2 | 0.50 | 11.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTGAA........................................................................................................................................................................ | 18 | 2 | 0.50 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................CTGATCCGGCTGGTGAG................................................................................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTAAT........................................................................................................................................................................ | 18 | 2 | 0.50 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTCA......................................................................................................................................................................... | 17 | 2 | 0.50 | 11.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTAAC........................................................................................................................................................................ | 18 | 2 | 0.50 | 11.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTAGA........................................................................................................................................................................ | 18 | 2 | 0.50 | 11.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAAAGTTTCGTTTGTAC......................................................................................................................................................................... | 17 | 2 | 0.50 | 11.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TTAAAGTTTCGTTTGT........................................................................................................................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ................................GAAGAGCTGATCCGG........................................................................................................................................................................................................... | 15 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ......................................................................................................................................................................ATAAGCATACCAGTG..................................................................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| AAGCAAAGGCAGAAATCACCAGGCTCATAAAAGAAGAGCTGATCCGGCTGGTGAGTGAAAACCTTAAAGTTTCGTTTGTTTTGTTTTAATAAGTGTTTTATTGAAATATAAATACAGAGAAGTACTCAAATCATAAACATATAGTTTGATGAATTTTCACAAAGTAATAAGCATACCAGTGTAGTCACTACCCAGATCAAGAAATAAAAAACATTACTAATATCCCAGAAGTCTTCTCTGTGTCTATTCT ............................................................................(((((((((((((((((...)))))))))))).)))))........................................................................................................................................ ...........................................................60.....................................................115..................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR037937(GSM510475) 293cand2. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029127(GSM416756) A549. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR553574(SRX182780) source: Heart. (Heart) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR553575(SRX182781) source: Kidney. (Kidney) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR038861(GSM458544) MM466. (cell line) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR015446(SRR015446) smallRNAs high-throughput sequencing Total. (breast) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR029126(GSM416755) 143B. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR040043(GSM532928) G428T. (cervix) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | TAX577745(Rovira) total RNA. (breast) | SRR039611(GSM531974) Human Normal Liver Tissue Sample 1. (liver) | SRR029125(GSM416754) U2OS. (cell line) | SRR040018(GSM532903) G701N. (cervix) | SRR029124(GSM416753) HeLa. (hela) | SRR037936(GSM510474) 293cand1. (cell line) | SRR444068(SRX128916) Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330857(SRX091695) tissue: skin psoriatic involveddisease state:. (skin) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR330885(SRX091723) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR038858(GSM458541) MEL202. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR553576(SRX182782) source: Testis. (testes) | TAX577579(Rovira) total RNA. (breast) | SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR038863(GSM458546) MM603. (cell line) | SRR191585(GSM715695) 196genomic small RNA (size selected RNA from . (breast) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR029131(GSM416760) MCF7. (cell line) | SRR040024(GSM532909) G613N. (cervix) | SRR038856(GSM458539) D11. (cell line) | SRR191632(GSM715742) 78genomic small RNA (size selected RNA from t. (breast) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189784 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................................................TTCTCTGTGTCTATTCCG | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |