ID: uc003kyj.2_intron_7_0_chr5_132422551_f.5p
GENE: (8)
chr5:132422501-132422750+


(1)
B-CELL
(2)
BREAST
(3)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
LIVER
(1)
OTHER
(10)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
TCTCTTAGCTAGAGTGGAGCCACCACTTCGTAGTGTTTTGGAACAAACCAGTAAGTATTTTTGTGATTGAATTTGTTTGCGTATCTCAGACTGTTTGGAAATTGTTATTTATTATCTTACTTTTGCAAGCAGTGATAGAAATTTTTATTGTATGAACTAATTCAGTGGTATATATTAAACTTTTTTTCAACCTGTATCTTCCCCCTGCCCAAAGTAATCTTTTGAAATGTCTAGGGAAATCTAATAAAAG
.............................................................................................................((((((..........((.(((((((.........))))))).))..........))))))................................................................................
........................................................................................................105..............................................................170..............................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189782SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189785SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343335SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343334SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
.....................................................................................................................................................GTATGAACTAATTCAGA....................................................................................1738.334.67-1.003.00-1.00----1.33-----------0.330.670.330.33--0.33--
......................................................................................................................................................TATGAACTAATTCAGACT..................................................................................188.000.005.00--1.00-------1.00-----1.00------------
.....................................................................................................................................................GTATGAACTAATTCAGACT..................................................................................1937.334.672.002.671.001.000.33----------------0.33--------
.....................................................................................................................................................GTATGAACTAATTCAGAC...................................................................................1835.334.67-2.671.67-0.67--------------------0.33----
......................................................................................................................................................TATGAACTAATTCAGACTG.................................................................................195.000.002.00------2.001.00---------------------
.....................................................................................................................................................GTATGAACTAATTCAG.....................................................................................1634.674.67-2.001.67-1.00-------------------------
.....................................................................................................................................................GTATGAACTAATTCA......................................................................................1553.003.00-1.400.60-0.20----------------0.20-0.20----0.200.20
.....................................................................................................................................................GTATGAACTAATTCAGACTG.................................................................................2032.004.671.33-------0.67---------------------
..................................................GTAAGTATTTTTGTGATTGAATTTGTTTGCG.........................................................................................................................................................................3112.002.00------2.00-----------------------
...CTTAGCTAGAGTGGAGCCA....................................................................................................................................................................................................................................1911.001.00-------------1.00----------------
...............GGAGCCACCACTTCGTAGT........................................................................................................................................................................................................................1911.001.00------------1.00-----------------
.............................................................................................................TATTATCTTACTTTTGCACTA........................................................................................................................211.000.001.00-----------------------------
...........................TCGTAGTGTTTTGGAACAAACC.........................................................................................................................................................................................................2211.001.00-----1.00------------------------
........................ACTTCGTAGTGTTTTGGAACAAACC.........................................................................................................................................................................................................2511.001.00-----1.00------------------------
.........................................................................................ACTGTTTGGAAATTGACA...............................................................................................................................................181.000.00-----1.00------------------------
......................................................................................................................................................TATGAACTAATTCAGTCTG.................................................................................191.000.001.00-----------------------------
..........................TTCGTAGTGTTTTGGAACAA............................................................................................................................................................................................................2011.001.00-------------------1.00----------
............................CGTAGTGTTTTGGAACAAAC..........................................................................................................................................................................................................2011.001.00--------------------1.00---------
......................CCACTTCGTAGTGTTTTGGAACAAACC.........................................................................................................................................................................................................2711.001.00----------------1.00-------------
..........................TTCGTAGTGTTTTGGAAC..............................................................................................................................................................................................................1811.001.00----------1.00-------------------
..................................................GTAAGTATTTTTGTGATT......................................................................................................................................................................................1811.001.00---------------1.00--------------
.....................................................................................................................................................GTATGAACTAATTCAGATTG.................................................................................2030.334.67---0.33--------------------------
..........................TTCGTAGTGTTTTGG.................................................................................................................................................................................................................1530.330.33--------------------------0.33---
.....................................................................................................................................................GTATGAACTAATTCAGACC..................................................................................1930.334.670.33-----------------------------
.....................................................................................................................................................GTATGAACTAATTCAGATGT.................................................................................2030.334.67--0.33---------------------------

Antisense strand
TCTCTTAGCTAGAGTGGAGCCACCACTTCGTAGTGTTTTGGAACAAACCAGTAAGTATTTTTGTGATTGAATTTGTTTGCGTATCTCAGACTGTTTGGAAATTGTTATTTATTATCTTACTTTTGCAAGCAGTGATAGAAATTTTTATTGTATGAACTAATTCAGTGGTATATATTAAACTTTTTTTCAACCTGTATCTTCCCCCTGCCCAAAGTAATCTTTTGAAATGTCTAGGGAAATCTAATAAAAG
.............................................................................................................((((((..........((.(((((((.........))))))).))..........))))))................................................................................
........................................................................................................105..............................................................170..............................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR189782SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189785SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343335SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343334SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
.................................................................................................................................................................................................GTATCTTCCCCCTGCCGC....................................... 181.000.00------------------1.00-----------
.................................................................................................................................................................................................GTATCTTCCCCCTGCCCGC...................................... 191.000.00--------------1.00---------------
..................................................................................................................................................................CAGTGGTATATATTAATCT..................................................................... 191.000.00---1.00--------------------------
........................................................................................................................................................................................TTTCAACCTGTATCTTCGA............................................... 191.000.00---1.00--------------------------