| (1) AGO1.ip | (1) AGO2.ip | (1) AGO3.ip | (10) BREAST | (20) CELL-LINE | (10) CERVIX | (1) LIVER | (1) OTHER | (8) SKIN |
| CTCCCTGAATCTTTTCCTCCGGTAAATTGTGCTTCCTGGGAAACTAAGGGGTAAGGGACTATACTGTGTAGCTTTATAGATTTTACTATGTTACTGTTTTATGAAAATGCATCATTTTCTAAATATTTCAATCTTCTTAAAAATTCTTGTCTGAGTACAGATTTTTCGTTTTTTATTTTTGGAAATAGGGTGTAATTTTATGTGCATTACATTTAAATATGGGTATTTCATATATGATATAACTATGTTC ..............................................................................................................................................(((((..((((((((.(((........))).)))))..)))...)))))........................................................... ..........................................................................................................................................139..........................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR191568(GSM715678) 51genomic small RNA (size selected RNA from t. (breast) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR000562(DRX000320) Isolation of RNA following immunoprecipitatio. (ago3 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040024(GSM532909) G613N. (cervix) | DRR000560(DRX000318) Isolation of RNA following immunoprecipitatio. (ago1 cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189784 | SRR037936(GSM510474) 293cand1. (cell line) | SRR040030(GSM532915) G013N. (cervix) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR191397(GSM715507) 30genomic small RNA (size selected RNA from t. (breast) | TAX577746(Rovira) total RNA. (breast) | SRR191590(GSM715700) 48genomic small RNA (size selected RNA from t. (breast) | SRR191573(GSM715683) 68genomic small RNA (size selected RNA from t. (breast) | SRR040028(GSM532913) G026N. (cervix) | SRR040036(GSM532921) G243N. (cervix) | SRR191593(GSM715703) 62genomic small RNA (size selected RNA from t. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR040008(GSM532893) G727N. (cervix) | SRR191570(GSM715680) 56genomic small RNA (size selected RNA from t. (breast) | SRR040039(GSM532924) G531T. (cervix) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | GSM532884(GSM532884) G871T. (cervix) | SRR040022(GSM532907) G575N. (cervix) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR191404(GSM715514) 47genomic small RNA (size selected RNA from t. (breast) | SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | TAX577453(Rovira) total RNA. (breast) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | GSM532886(GSM532886) G850T. (cervix) | SRR330876(SRX091714) tissue: skin psoriatic involveddisease state:. (skin) | GSM532885(GSM532885) G850N. (cervix) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................ATTTTTGGAAATAGG............................................................. | 15 | 0 | 65.00 | 65.00 | 35.00 | 10.00 | 7.00 | 6.00 | - | 3.00 | - | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGATA.......................................................... | 18 | 0 | 5.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGGGAT......................................................... | 19 | 3.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGAGG.......................................................... | 18 | 0 | 3.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGAGC.......................................................... | 18 | 0 | 3.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGAGAA......................................................... | 19 | 0 | 2.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGAGTT......................................................... | 19 | 0 | 2.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGCGA.......................................................... | 18 | 0 | 2.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................................................ATTTTTCGTTTTTTATTTTTGGGC.................................................................. | 24 | 2.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGGGA.......................................................... | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGGATGG........................................................ | 20 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................TTCTTGTCTGAGTACAGATT....................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGAGAC......................................................... | 19 | 0 | 1.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................CGTTTTTTATTTTTGGGC.................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGATGG......................................................... | 19 | 0 | 1.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................ATTTTTCGTTTTTTATTTTTGGTC.................................................................. | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGATAT......................................................... | 19 | 0 | 1.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................................TTTGGAAATAGGGTGTAATGC.................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGAATA......................................................... | 19 | 0 | 1.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGAGCT......................................................... | 19 | 0 | 1.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGGGGGC........................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................TTTTCGTTTTTTATTTTTTATG.................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGAAAT......................................................... | 19 | 0 | 1.00 | 65.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................TTTTTCGTTTTTTATTTTTA..................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATTTTTGGAAATAGGGAATG........................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ......GAATCTTTTCCTCCGGCAT................................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................TTTATTTTTGGAAATAGG............................................................. | 18 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| CTCCCTGAATCTTTTCCTCCGGTAAATTGTGCTTCCTGGGAAACTAAGGGGTAAGGGACTATACTGTGTAGCTTTATAGATTTTACTATGTTACTGTTTTATGAAAATGCATCATTTTCTAAATATTTCAATCTTCTTAAAAATTCTTGTCTGAGTACAGATTTTTCGTTTTTTATTTTTGGAAATAGGGTGTAATTTTATGTGCATTACATTTAAATATGGGTATTTCATATATGATATAACTATGTTC ..............................................................................................................................................(((((..((((((((.(((........))).)))))..)))...)))))........................................................... ..........................................................................................................................................139..........................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR191568(GSM715678) 51genomic small RNA (size selected RNA from t. (breast) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR000562(DRX000320) Isolation of RNA following immunoprecipitatio. (ago3 cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040024(GSM532909) G613N. (cervix) | DRR000560(DRX000318) Isolation of RNA following immunoprecipitatio. (ago1 cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189784 | SRR037936(GSM510474) 293cand1. (cell line) | SRR040030(GSM532915) G013N. (cervix) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR191397(GSM715507) 30genomic small RNA (size selected RNA from t. (breast) | TAX577746(Rovira) total RNA. (breast) | SRR191590(GSM715700) 48genomic small RNA (size selected RNA from t. (breast) | SRR191573(GSM715683) 68genomic small RNA (size selected RNA from t. (breast) | SRR040028(GSM532913) G026N. (cervix) | SRR040036(GSM532921) G243N. (cervix) | SRR191593(GSM715703) 62genomic small RNA (size selected RNA from t. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR040008(GSM532893) G727N. (cervix) | SRR191570(GSM715680) 56genomic small RNA (size selected RNA from t. (breast) | SRR040039(GSM532924) G531T. (cervix) | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | GSM532884(GSM532884) G871T. (cervix) | SRR040022(GSM532907) G575N. (cervix) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR191404(GSM715514) 47genomic small RNA (size selected RNA from t. (breast) | SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | TAX577453(Rovira) total RNA. (breast) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | GSM532886(GSM532886) G850T. (cervix) | SRR330876(SRX091714) tissue: skin psoriatic involveddisease state:. (skin) | GSM532885(GSM532885) G850N. (cervix) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................TACTGTTTTATGAAACCA............................................................................................................................................. | 18 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................ATTTCAATCTTCTTATTTT........................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................AATATTTCAATCTTCTTAGTGG........................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ......GAATCTTTTCCTCCGCAA.................................................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................TTCGTTTTTTATTTTGTTC................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |