ID: uc003kdc.3_intron_1_0_chr5_73932324_r.3p
GENE: (1)
chr5:73932274-73932523-


(1)
BRAIN 		(2)
BREAST 		(8)
CELL-LINE 		(2)
CERVIX 		(1)
HEART 		(2)
OTHER 		(2)
SKIN

Sense strand
AGTATTAGCAGTGAATATCCTTCCTTCCGGGTAGTTGTCTCTGGCTTTGTCCTGGAATGGCCATACACTATTCTAGAATAGTAGGTGGCATGGTCAACAACAAAGTGTTCTGTTTTTTGTGCAAAACCATTGTTGCTTTCGTTCTGCTGTTCTGAACATCAGGAGCATCATTTTCAATTTATTATTATTATTATTTTTAGGAGTGGAAACAAAATGTCAGTCAGTGTGCATGAGAACCGCAAGTCCAGGG
........................................................................................................................((((........))))........((((..((((.....))))))))...................................................................................
...............................................................................................................112.....................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782SRR343337SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR189783SRR343336SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTATTTTTAG..................................................35123.0023.0011.003.006.003.00-------------------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTATTTTCAG..................................................3515.001.00-3.00-2.00-------------------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTATTTTTA...................................................3413.003.003.00----------------------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTTTT.......................................................302.000.00---1.00---1.00---------------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTATTTTAG...................................................3411.001.00---1.00-------------------
.............AATATCCTTCCTTCCGGG...........................................................................................................................................................................................................................1811.001.00-----------1.00-----------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTATTTTC....................................................3311.001.00-1.00---------------------
................................................................................................................................................................................ATTTATTATTATTATTATTTTTACAG................................................261.000.00--1.00--------------------
...............................................................................................................................................................................AATTTATTATTATTATTATTTTGTG..................................................251.000.001.00----------------------
...................................................................................................................................................................................................................AAATGTCAGTCAGTGTGCATGAG................2311.001.00-------------------1.00---
.................TCCTTCCTTCCGGGTAGTTGTCTCTGGCTC...........................................................................................................................................................................................................301.000.00-----------------1.00-----
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTTTTA......................................................311.000.00-1.00---------------------
.....................................................................................................................................TGCTTTCGTTCTGCTGTTCTGAACATCAGGAGCAT..................................................................................3511.001.00--------------------1.00--
........................................................................................................................................................................CATTTTCAATTTATTATTATTATTATTTCTAG..................................................321.000.00-1.00---------------------
........................................................................................................................................................................................................................TCAGTCAGTGTGCATGAGAACCGCAAGTCCAG..3211.001.00----1.00------------------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTATTTAG....................................................331.000.001.00----------------------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTTTTA.........................................................281.000.00--1.00--------------------
..........................................................................................................................................................................TTTTCAATTTATTATTATTATTATTTTTTTG.................................................311.000.001.00----------------------
....................................................................................................................................................................................................................AATGTCAGTCAGTGTGCATGAGAACCGCAAGTC.....3311.001.00----1.00------------------
..........................................................................................................................................................................................................................AGTCAGTGTGCATGAGAACCGCAAGTCCAG..3011.001.00----1.00------------------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTATTTCTAG..................................................351.000.00---1.00-------------------
...................................................................................................................................................................................................................AAATGTCAGTCAGTGTGCATG..................2111.001.00------------------1.00----
........................................................................................................................................................................CATTTTCAATTTATTATTATTATTATTTTTAG..................................................3211.001.001.00----------------------
....................................................................................................................TTGTGCAAAACCATTCTAG...................................................................................................................191.000.00-----1.00-----------------
................................................................................................................................................................................ATTTATTATTATTATTATTTTCCAG.................................................251.000.00---1.00-------------------
....................................................................................................................................................................................................................AATGTCAGTCAGTGTGCATGAGAACCGC..........2811.001.00--------------1.00--------
..........................................................................................................................................................................................................................AGTCAGTGTGCATGAGAACCGCAA........2411.001.00---------1.00-------------
................................................................................................................................................................................ATTTATTATTATTATTATTTTTAATTG...............................................271.000.00--1.00--------------------
.......................................................................................................AGTGTTCTGTTTTTTGATGC...............................................................................................................................201.000.00---------------1.00-------
.....................................................................................................................................................................CATCATTTTCAATTTATTATTATTATTATTTT.....................................................3211.001.00-1.00---------------------
........................................................................................................................................................................................................................TCAGTCAGTGTGCATGAGAACCGC..........2411.001.00----1.00------------------
............................GGGTAGTTGTCTCTGGAGT...........................................................................................................................................................................................................191.000.00----------1.00------------
.........................................................TGGCCATACACTATTATG...............................................................................................................................................................................181.000.00--------1.00--------------
...................................................................................................................................................................................................................AAATGTCAGTCAGTGTGCATGAGAACCGC..........2911.001.00----1.00------------------
........................................................................................................................................................................................................GAGTGGAAACAAAATGTCAGTCAGTGTGCATG..................3211.001.00----1.00------------------
.....................................................................................................................................................................................................................ATGTCAGTCAGTGTGCA....................1720.500.50---------------------0.50-
.....................................................................................................................................................................CATCATTTTCAATTTAT....................................................................1750.200.20-------0.20---------------

Antisense strand
AGTATTAGCAGTGAATATCCTTCCTTCCGGGTAGTTGTCTCTGGCTTTGTCCTGGAATGGCCATACACTATTCTAGAATAGTAGGTGGCATGGTCAACAACAAAGTGTTCTGTTTTTTGTGCAAAACCATTGTTGCTTTCGTTCTGCTGTTCTGAACATCAGGAGCATCATTTTCAATTTATTATTATTATTATTTTTAGGAGTGGAAACAAAATGTCAGTCAGTGTGCATGAGAACCGCAAGTCCAGGG
........................................................................................................................((((........))))........((((..((((.....))))))))...................................................................................
...............................................................................................................112.....................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782SRR343337SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR189783SRR343336SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................AAAGTGTTCTGTTTTTTACT................................................................................................................................. 202.000.00------1.00------1.00---------
.......................................................................................................................................................................................ATTATTATTATTTTTAGTTTG.............................................. 211.000.00------------1.00----------
.......................................................................................................AGTGTTCTGTTTTTTCAT................................................................................................................................. 181.000.00-----1.00-----------------
.....................................................................................................AAAGTGTTCTGTTTTTTACTT................................................................................................................................ 211.000.00------1.00----------------
...........TGAATATCCTTCCTTCTCTG........................................................................................................................................................................................................................... 201.000.00-----1.00-----------------
................................................................................................................TTTTTTGTGCAAAACGATA....................................................................................................................... 191.000.00----------------1.00------
...............................................................................ACCATGCCACCTACT............................................................................................................................................................ 1570.140.14---------------------0.14-
...........................................................................................ACTTTGTTGTTGACC................................................................................................................................................ 1580.120.12----------------------0.12