ID: uc003jts.2_intron_9_0_chr5_64857392_r.5p
GENE: (1)
chr5:64858725-64858974-


(1)
AGO2.ip 		(10)
B-CELL 		(1)
BRAIN 		(1)
BREAST 		(34)
CELL-LINE 		(3)
CERVIX 		(5)
HELA 		(1)
KIDNEY 		(1)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(13)
SKIN 		(1)
TESTES 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
GCGCTTCCTGCGCAGCGCCTAGGCGACCTGGAGTTTGTGACGCTGTGATGGTAAGACCTGGGCCGGGGAGGTTGATATAACGGTTGAATCTTGTGGAGCTCCAGTCCTGAAGGTGAAACCCTTATCGCCGGCCAACTAGATACCTGACTTCCCAGCCGGGCTTTGAGTCCCGTTCTTCTCGGCTTCCCGCGCGCCAACGCAAGCTCCATAACCTCACCAATATTTAGAGAAAGATGGAAGGGTGGGGACA
.........................................................................((((....((((..(((((..(((.......)))..)))))..))))..)))).(((((.....((........)).....)))))...........................................................................................
.........................................................................74.............................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM359174(GSM359174)
hela_5_1. (hela)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR040027(GSM532912)
G220T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)
.........................................GCTGTGATGGTAAGACCTGG.............................................................................................................................................................................................20113.0013.008.002.00-----1.00--------------------------1.00----------------------------1.00-------------
.......................................ACGCTGTGATGGTAAGACCTGG.............................................................................................................................................................................................22111.0011.007.001.00-1.00-1.00------------------1.00----------------------------------------------------
.........................................GCTGTGATGGTAAGACCT...............................................................................................................................................................................................1816.006.00---------3.00-------------1.00---1.00-1.00-----------------------------------------------
...........................CTGGAGTTTGTGACGCTG.............................................................................................................................................................................................................1815.005.00------------1.00--1.00---1.00------------------1.00-----------------1.00--------------------
...............................................ATGGTAAGACCTGGGCCGG........................................................................................................................................................................................1915.005.002.00--2.00-1.00-----------------------------------------------------------------------
..............................................................................AACGGTTGAATCTTGTGG..........................................................................................................................................................1814.004.003.00---1.00------------------------------------------------------------------------
..............................................................................AACGGTTGAATCTTGTGGA.........................................................................................................................................................1914.004.00-4.00---------------------------------------------------------------------------
......................................GACGCTGTGATGGTAAGA..................................................................................................................................................................................................1813.003.00--2.00------------------------------------1.00-------------------------------------
........................................CGCTGTGATGGTAAGACCTGG.............................................................................................................................................................................................2113.003.002.00-----------------------1.00----------------------------------------------------
.......................................ACGCTGTGATGGTAAGACCTG..............................................................................................................................................................................................2113.003.00-2.00----------------------------------------------------------------1.00----------
...............................................................................ACGGTTGAATCTTGTGGAGC.......................................................................................................................................................2013.003.00-2.00--1.00------------------------------------------------------------------------
.......................................ACGCTGTGATGGTAAGA..................................................................................................................................................................................................1713.003.00--2.00-1.00------------------------------------------------------------------------
..............................................GATGGTAAGACCTGGGCCGG........................................................................................................................................................................................2013.003.001.00--1.00------------------1.00------------------------------------------------------
.........................................GCTGTGATGGTAAGACCTGGGC...........................................................................................................................................................................................2213.003.00-3.00---------------------------------------------------------------------------
.........................ACCTGGAGTTTGTGACGCTG.............................................................................................................................................................................................................2013.003.00-2.00-1.00-------------------------------------------------------------------------
..........................................................................ATATAACGGTTGAATCTTG.............................................................................................................................................................1912.002.00------1.00----------------1.00-----------------------------------------------------
........................GACCTGGAGTTTGTGACGCTGTGATG........................................................................................................................................................................................................2612.002.00-------------1.00----------------------------------------------------------1.00----
...........................CTGGAGTTTGTGACGCTGTGA..........................................................................................................................................................................................................2112.002.00-1.00--------------1.00------------------------------------------------------------
..........................................CTGTGATGGTAAGACCTGGGC...........................................................................................................................................................................................2112.002.00-2.00---------------------------------------------------------------------------
...........................CTGGAGTTTGTGACGCTGA............................................................................................................................................................................................................1912.005.00------------2.00----------------------------------------------------------------
..............................................................................AACGGTTGAATCTTGTGGAGCTC.....................................................................................................................................................2312.002.00-2.00---------------------------------------------------------------------------
..............................................GATGGTAAGACCTGGGCCGGGGAGGTT.................................................................................................................................................................................2712.002.00--2.00--------------------------------------------------------------------------
...............................................................................................................................................CTGACTTCCCAGCCGGGCTTTG.....................................................................................2212.002.00--------2.00--------------------------------------------------------------------
....................................................................AGGTTGATATAACGGTTGAATC................................................................................................................................................................2212.002.00-1.00-------------------------------------------------1.00-------------------------
.......................CGACCTGGAGTTTGTGACGCT..............................................................................................................................................................................................................2112.002.002.00----------------------------------------------------------------------------
..............................................................................................................................GCCGGCCAACTAGATACCTGA.......................................................................................................2112.002.002.00----------------------------------------------------------------------------
.........................ACCTGGAGTTTGTGACGCTGTGATGG.......................................................................................................................................................................................................2612.002.00-----------------------------------1.00-----------1.00-----------------------------
.........................ACCTGGAGTTTGTGACGCTGT............................................................................................................................................................................................................2112.002.00---1.00-1.00-----------------------------------------------------------------------
..............GCGCCTAGGCGACCTGGAGT........................................................................................................................................................................................................................2012.002.00-----------2.00-----------------------------------------------------------------
................................................TGGTAAGACCTGGGCC..........................................................................................................................................................................................1612.002.00-----1.00-------------------1.00---------------------------------------------------
..................................................GTAAGACCTGGGCCGGGGAGG...................................................................................................................................................................................2112.002.00-1.00--------------------------------------------------------------1.00------------
....................AGGCGACCTGGAGTTTGTGACGCTGTGATGGT......................................................................................................................................................................................................3212.002.00--------------------------------1.00--------------------------------------1.00-----
...............................................................CGGGGAGGTTGATATAACGGTTGA...................................................................................................................................................................2411.001.00-------------------------1.00---------------------------------------------------
................................................TGGTAAGACCTGGGCCGGGGAGGTTGAT..............................................................................................................................................................................2811.001.00------1.00----------------------------------------------------------------------
.........................ACCTGGAGTTTGTGACGCTGTGATG........................................................................................................................................................................................................2511.001.00------1.00----------------------------------------------------------------------
.......................................................................TTGATATAACGGTTGAATCTTGTGGA.........................................................................................................................................................2611.001.00--1.00--------------------------------------------------------------------------
...............................................................................................................................CCGGCCAACTAGATACCTGA.......................................................................................................2011.001.00-1.00---------------------------------------------------------------------------
......................................GACGCTGTGATGGTAAGACATG..............................................................................................................................................................................................2211.001.00---1.00-------------------------------------------------------------------------
..........................................................................................TTGTGGAGCTCCAGTCCTGAAGGTGAAACC..................................................................................................................................3011.001.00-------------------------------------------1.00---------------------------------
............................TGGAGTTTGTGACGCTGTGATGG.......................................................................................................................................................................................................2311.001.00-----------------1.00-----------------------------------------------------------
....................AGGCGACCTGGAGTTTGTG...................................................................................................................................................................................................................1911.001.00----------1.00------------------------------------------------------------------
...........................CTGGAGTTTGTGACGCTGTG...........................................................................................................................................................................................................2011.001.00-------------------------------------1.00---------------------------------------
............................................................................................GTGGAGCTCCAGTCCTGAAGG.........................................................................................................................................2111.001.00-1.00---------------------------------------------------------------------------
...............................................................CGGGGAGGTTGATATAACGGT......................................................................................................................................................................2111.001.00-------------------1.00---------------------------------------------------------
...............................................ATGGTAAGACCTGGGCCG.........................................................................................................................................................................................1811.001.00------------------------------------------1.00----------------------------------
....................................GTGACGCTGTGATGGTAAGACCTGGG............................................................................................................................................................................................2611.001.00-----1.00-----------------------------------------------------------------------
..................................TTGTGACGCTGTGATGGTAA....................................................................................................................................................................................................2011.001.00---------1.00-------------------------------------------------------------------
................................................................................................................GTGAAACCCTTATCGCCGGC......................................................................................................................2011.001.00-------------1.00---------------------------------------------------------------
...............................................................................ACGGTTGAATCTTGTGG..........................................................................................................................................................1711.001.00--1.00--------------------------------------------------------------------------
.......................................ACGCTGTGATGGTAAGACCTGGGC...........................................................................................................................................................................................2411.001.00-1.00---------------------------------------------------------------------------
....................................................................AGGTTGATATAACGGTTGAATCTT..............................................................................................................................................................2411.001.00--------------------------------------------------------------------1.00--------
...................................................................................TTGAATCTTGTGGAGCTC.....................................................................................................................................................1811.001.00----1.00------------------------------------------------------------------------
.................................................GGTAAGACCTGGGCCGG........................................................................................................................................................................................1721.001.00-----------1.00-----------------------------------------------------------------
....................................GTGACGCTGTGATGGTAAGACCTGGATC..........................................................................................................................................................................................281.000.00---------------------------------------------1.00-------------------------------
...........................................TGTGATGGTAAGACCTGGGCC..........................................................................................................................................................................................2111.001.00--------------------1.00--------------------------------------------------------
....................................GTGACGCTGTGATGGTAAGA..................................................................................................................................................................................................2011.001.00-1.00---------------------------------------------------------------------------
.....................................................................GGTTGATATAACGGTG.....................................................................................................................................................................161.000.00------------------------------------1.00----------------------------------------
......................................................................................AATCTTGTGGAGCTCCAGTCCTGAAGGCG.......................................................................................................................................291.000.00-------------------------------------------------1.00---------------------------
..............................................................................................................AGGTGAAACCCTTATCGCCGGC......................................................................................................................2211.001.001.00----------------------------------------------------------------------------
..........................................................................................................................TATCGCCGGCCAACTAGAT.............................................................................................................1911.001.00--1.00--------------------------------------------------------------------------
....................................................................................................CCAGTCCTGAAGGTGAAAC...................................................................................................................................1911.001.00------------------------------1.00----------------------------------------------
.............................................................GCCGGGGAGGTTGATATAACGGT......................................................................................................................................................................2311.001.001.00----------------------------------------------------------------------------
.......................................ACGCTGTGATGGTAAGACCT...............................................................................................................................................................................................2011.001.00------------------1.00----------------------------------------------------------
.................................................GGTAAGACCTGGGCCGGGG......................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00---
.............................................................................................................AAGGTGAAACCCTTATCGCCGGCCA....................................................................................................................2511.001.00----------------------------------------------------------------------1.00------
.....................................TGACGCTGTGATGGTAAGACCTGGGC...........................................................................................................................................................................................2611.001.00-----1.00-----------------------------------------------------------------------
............................TGGAGTTTGTGACGCTGTGATGGTC.....................................................................................................................................................................................................251.000.00---------------------------------------------------------1.00-------------------
...........................CTGGAGTTTGTGACGCT..............................................................................................................................................................................................................1711.001.00-------1.00---------------------------------------------------------------------
.......................................................ACCTGGGCCGGGGAGGTTGATA.............................................................................................................................................................................2211.001.00--------1.00--------------------------------------------------------------------
...........................CTGGAGTTTGTGACGCTGTGAT.........................................................................................................................................................................................................2211.001.00-------------------------------1.00---------------------------------------------
.......................................................................................ATCTTGTGGAGCTCCAGT.................................................................................................................................................1811.001.00----1.00------------------------------------------------------------------------
..............................................................CCGGGGAGGTTGATATAACGGTTGAATCT...............................................................................................................................................................2911.001.00----------------------------------------------1.00------------------------------
.........................................GCTGTGATGGTAAGACCTGGGCC..........................................................................................................................................................................................2311.001.00--------------1.00--------------------------------------------------------------
.........................................................CTGGGCCGGGGAGGTGG................................................................................................................................................................................171.000.00-------------------------------------------------------1.00---------------------
...............................................................................................................GGTGAAACCCTTATCGCCGG.......................................................................................................................2011.001.00-------------------------------------------------------------------1.00---------
..........................................CTGTGATGGTAAGACCTG..............................................................................................................................................................................................1811.001.00-----------------1.00-----------------------------------------------------------
..................................TTGTGACGCTGTGATGG.......................................................................................................................................................................................................1711.001.00----1.00------------------------------------------------------------------------
......................GCGACCTGGAGTTTGTGACGCTGTGATGGT......................................................................................................................................................................................................3011.001.00--1.00--------------------------------------------------------------------------
..........................................CTGTGATGGTAAGACCTGGGCCGGGG......................................................................................................................................................................................2611.001.00--------------------------------------------------1.00--------------------------
......................................................................................................................................ACTAGATACCTGACTTCCCAGC..............................................................................................2211.001.001.00----------------------------------------------------------------------------
.................................TTTGTGACGCTGTGATG........................................................................................................................................................................................................1711.001.00--------------------1.00--------------------------------------------------------
.........................ACCTGGAGTTTGTGACGC...............................................................................................................................................................................................................1811.001.001.00----------------------------------------------------------------------------
..............................................................................AACGGTTGAATCTTGATTT.........................................................................................................................................................191.000.00----------------------------1.00------------------------------------------------
...................................................................................TTGAATCTTGTGGAGCATC....................................................................................................................................................191.000.00-----------------------------------------1.00-----------------------------------
.......................................ACGCTGTGATGGTAAGACATG..............................................................................................................................................................................................2111.001.00------------------1.00----------------------------------------------------------
.....................................................................................................................ACCCTTATCGCCGGCCAACTA................................................................................................................2111.001.00----------1.00------------------------------------------------------------------
......................................GACGCTGTGATGGTAAGACC................................................................................................................................................................................................2011.001.00--------------------------------------------1.00--------------------------------
........................................................................................TCTTGTGGAGCTCCAGTC................................................................................................................................................1811.001.00---------------------------------------------------------------------------1.00-
.........................ACCTGGAGTTTGTGACGCTTT............................................................................................................................................................................................................211.000.00------1.00----------------------------------------------------------------------
...................................TGTGACGCTGTGATGGTAAGA..................................................................................................................................................................................................2111.001.00-------1.00---------------------------------------------------------------------
.................................TTTGTGACGCTGTGATGG.......................................................................................................................................................................................................1811.001.00----------------------------------------------------1.00------------------------
.............................................................GCCGGGGAGGTTGATC.............................................................................................................................................................................161.000.00-----------------------------------------------------------1.00-----------------
....................AGGCGACCTGGAGTTTGTGA..................................................................................................................................................................................................................2011.001.00------1.00----------------------------------------------------------------------
...........................CTGGAGTTTGTGACGCTGTGATGGTAAGACC................................................................................................................................................................................................3111.001.00-----------------------------------------------------1.00-----------------------
..............................................................................................................................GCCGGCCAACTAGATACCTG........................................................................................................2011.001.001.00----------------------------------------------------------------------------
..........................................CTGTGATGGTAAGACCTGGGCCGG........................................................................................................................................................................................2411.001.00------------------------------------------------------1.00----------------------
..................................................................................GTTGAATCTTGTGGAGCTCCAGTCCTGAAGG.........................................................................................................................................3111.001.00--------------------------------------------------------------1.00--------------
..........................................CTGTGATGGTAAGACCTGGG............................................................................................................................................................................................2011.001.001.00----------------------------------------------------------------------------
............................................................................ATAACGGTTGAATCTTGTGGAGCTCC....................................................................................................................................................2611.001.00---1.00-------------------------------------------------------------------------
........................GACCTGGAGTTTGTGACGCTGTGATGG.......................................................................................................................................................................................................2711.001.00-------------1.00---------------------------------------------------------------
.............................................................................................................AAGGTGAAACCCTTATCGCCGGCCAA...................................................................................................................2611.001.00----------------1.00------------------------------------------------------------
..............................................................CCGGGGAGGTTGATATAT..........................................................................................................................................................................181.000.00--------------------------------------------------------------------------1.00--
................................................................................................................................CGGCCAACTAGATACCTGACTTC...................................................................................................2311.001.00-----1.00-----------------------------------------------------------------------
.........................................................................................CTTGTGGAGCTCCAGTCCTGAAG..........................................................................................................................................2311.001.00--------1.00--------------------------------------------------------------------
....................................GTGACGCTGTGATGGTGAGA..................................................................................................................................................................................................201.000.00------------------------------------------------1.00----------------------------
...........................................TGTGATGGTAAGACCTGGGCCGGGGA.....................................................................................................................................................................................2611.001.00-----------------------------------------------------------------1.00-----------
.....................................................................................GAATCTTGTGGAGCTCCAG..................................................................................................................................................1911.001.00--------------1.00--------------------------------------------------------------
........................................................................................................................CTTATCGCCGGCCAACTA................................................................................................................1811.001.00----------------------1.00------------------------------------------------------
...........................CTGGAGTTTGTGACGCTGTGATGGTA.....................................................................................................................................................................................................2611.001.00--------------------------1.00--------------------------------------------------
................................................................................................................................CGGCCAACTAGATACCTGA.......................................................................................................1911.001.001.00----------------------------------------------------------------------------
...............................................................................ACGGTTGAATCTTGTGGAGCTC.....................................................................................................................................................2211.001.00----1.00------------------------------------------------------------------------
.............................................................GCCGGGGAGGTTGATATAACGG.......................................................................................................................................................................2211.001.001.00----------------------------------------------------------------------------
......................................GACGCTGTGATGGTAAGAC.................................................................................................................................................................................................1911.001.00------------------------------------------------------------1.00----------------
..............................GAGTTTGTGACGCTGTGATGGTTTT...................................................................................................................................................................................................251.000.00----------1.00------------------------------------------------------------------
...........................................................................................TGTGGAGCTCCAGTCCTGAAG..........................................................................................................................................2111.001.00---------------1.00-------------------------------------------------------------
.........................................GCTGTGATGGTAAGACCTG..............................................................................................................................................................................................1911.001.00-1.00---------------------------------------------------------------------------
.......................................ACGCTGTGATGGTAAGAC.................................................................................................................................................................................................1811.001.00-------1.00---------------------------------------------------------------------
.....................................................................................................................ACCCTTATCGCCGGCCAACT.................................................................................................................2011.001.00----------1.00------------------------------------------------------------------
..........................CCTGGAGTTTGTGACGCT..............................................................................................................................................................................................................1811.001.00-------------------------------------------------------------1.00---------------
..........................................................................................TTGTGGAGCTCCAGTCC...............................................................................................................................................1730.670.67--0.67--------------------------------------------------------------------------
........................................................CCTGGGCCGGGGAGGTT.................................................................................................................................................................................1720.500.50-------0.50---------------------------------------------------------------------
.................................................................................................GCTCCAGTCCTGAAGGTG.......................................................................................................................................1820.500.500.50----------------------------------------------------------------------------
.........................................................CTGGGCCGGGGAGGTTGA...............................................................................................................................................................................1820.500.50--------------0.50--------------------------------------------------------------
......................................................GACCTGGGCCGGGGA.....................................................................................................................................................................................1560.170.17----0.17------------------------------------------------------------------------

Antisense strand
GCGCTTCCTGCGCAGCGCCTAGGCGACCTGGAGTTTGTGACGCTGTGATGGTAAGACCTGGGCCGGGGAGGTTGATATAACGGTTGAATCTTGTGGAGCTCCAGTCCTGAAGGTGAAACCCTTATCGCCGGCCAACTAGATACCTGACTTCCCAGCCGGGCTTTGAGTCCCGTTCTTCTCGGCTTCCCGCGCGCCAACGCAAGCTCCATAACCTCACCAATATTTAGAGAAAGATGGAAGGGTGGGGACA
.........................................................................((((....((((..(((((..(((.......)))..)))))..))))..)))).(((((.....((........)).....)))))...........................................................................................
.........................................................................74.............................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM359174(GSM359174)
hela_5_1. (hela)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR040027(GSM532912)
G220T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)
..............................................................CCGGGGAGGTTGATAAT........................................................................................................................................................................... 172.000.00---------------------2.00-------------------------------------------------------
..............................................GATGGTAAGACCTGGGTCC......................................................................................................................................................................................... 191.000.00---------------------------------1.00-------------------------------------------
...............................................................................................GAGCTCCAGTCCTGAAGGTGTG..................................................................................................................................... 221.000.00----------------------------------------1.00------------------------------------
.............................................................................................................................................CCGGCTGGGAAGTCAGGT........................................................................................... 1811.001.00---------------------------------------------------------------------1.00-------
...........................................................GGGCCGGGGAGGTTGCG.............................................................................................................................................................................. 171.000.00----------------------------------------------------------1.00------------------
.............................................................................................................................................................................GGGAAGCCGAGAAGA.............................................................. 1580.120.12----------------------------------------------------------------------------0.12