ID: uc003jth.3_intron_0_0_chr5_63461781_f.5p
GENE: (1)
chr5:63461731-63461980+


(2)
AGO2.ip
(6)
BRAIN
(13)
BREAST
(12)
CELL-LINE
(16)
CERVIX
(1)
FIBROBLAST
(7)
HEART
(1)
HELA
(1)
KIDNEY
(4)
LIVER
(3)
OTHER
(57)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GGAGCGCCGGGACGGGGCGCGAAGCCGGAGGCTCCGGGACGTGGATACAGGTAAAGGCCGGCGGGTCGGAGTCGGGCGGGGCGCGGCGGCGGCGCCTCTCGGAGGGACCTGGCCTCGGCCGGGCCCTACCCAGCCGCGGTGGCCCGGGCCCCCACGTTGGCCCAGGCGGGGACGTGCCAAGGGGCTGGGCTAGGGTTGCCGCTGGCCTGGCCGCCTCTCGCCCGGCGGGCCTCAGGTGACGCGGCCGCGG
...............................................................................((((((((.(((((.......((((((.((((((....)))))))))).))..))))).)).(((.(((((........))))).))).....))))))........................................................................
..............................................................................79....................................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040009(GSM532894)
G727T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343336SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532874(GSM532874)
G699T. (cervix)
SRR189782TAX577742(Rovira)
total RNA. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR191583(GSM715693)
97genomic small RNA (size selected RNA from t. (breast)
SRR191495(GSM715605)
159genomic small RNA (size selected RNA from . (breast)
SRR040038(GSM532923)
G531N. (cervix)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM532879(GSM532879)
G659N. (cervix)
SRR038863(GSM458546)
MM603. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR040030(GSM532915)
G013N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532880(GSM532880)
G659T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
...................................................................................CGGCGGCGGCGCCTCTGG.....................................................................................................................................................18423.250.757.253.00---1.000.50----0.75-0.25--------0.50-0.250.25---0.250.250.250.25-0.75-----0.50-0.250.25--------0.75--------------0.500.250.50---0.250.25--0.500.250.250.25--0.250.25--------------0.250.25--0.25---0.25-0.25--0.25--0.25-0.25-0.25--0.25--
...................................................................................CGGCGGCGGCGCCTCTG......................................................................................................................................................17411.500.752.500.50---------0.500.25---0.25----0.750.25-0.500.250.50-------0.25-----0.75----0.25------0.25---------------0.250.25---------0.25-0.50-0.25-----------0.25--0.25--0.25----0.25---0.25---0.25-0.25----0.25-0.25-
...................................................................................CGGCGGCGGCGCCTCTGGA....................................................................................................................................................1949.250.751.502.500.25--0.75----0.250.25---------0.250.25-0.50-0.25-----0.25------------0.25-------------------0.250.25-------------0.25-0.25---------------------0.250.25-----0.25--------0.25----
....................................................................................GGCGGCGGCGCCTCTGGAC...................................................................................................................................................198.000.002.001.00----------1.00-1.00----------------1.001.00-----------------------------1.00--------------------------------------------------------------
....................................................................................GGCGGCGGCGCCTCTGGA....................................................................................................................................................188.000.001.001.00----2.00-------1.00------1.00--------------------1.00---------------1.00------------------------------------------------------------------
..................................................................................GCGGCGGCGGCGCCTCTGG.....................................................................................................................................................1936.333.331.001.00---0.33------0.33-0.33---------0.33------0.33--------------------------------------0.670.670.33-0.33------------0.33---0.33---------------------------------
...................................................................................CGGCGGCGGCGCCTCTGGAC...................................................................................................................................................2046.250.751.251.25--------0.75--0.25--0.25----------0.25------0.25----------0.25---------------------0.25-------0.25--0.25---0.25--------------0.25---------------0.25----0.25------
................................................................................................................................................................CCCAGGCGGGGACGTGC.........................................................................1714.004.00-------------1.00-----------1.00----------------------1.00--------------1.00-------------------------------------------------------------
..................................................................................GCGGCGGCGGCGCCTCTGGA....................................................................................................................................................2033.673.33-1.00----------0.67---0.33-------------------------------------------------0.33------0.33-----------0.33--0.33-----0.33------------------------------
..................................................................................GCGGCGGCGGCGCCTCT.......................................................................................................................................................1733.333.33----1.67--0.33--------------------0.33--------0.33---------------------------------------------------0.33--0.33--------------------------------
..................................................................................GCGGCGGCGGCGCCTCTGGAC...................................................................................................................................................2133.333.33------------0.33--------------1.33-------0.33--0.33--------------------------0.67---------------------------0.33-------------------------------
................................................AGGTAAAGGCCGGCGC..........................................................................................................................................................................................163.000.00------------------2.00---------------------------1.00------------------------------------------------------------------------------
..................................................................................GCGGCGGCGGCGCCTCTG......................................................................................................................................................1832.333.33------------------------0.330.33---0.330.33--0.33-----0.33--------------------------------------------------0.33----------------------------------
...................................................................................CGGCGGCGGCGCCTCTCGAC...................................................................................................................................................202.000.00-------------1.00----------------------------------------1.00----------------------------------------------------------------------
.................................................................................CGCGGCGGCGGCGCCGGG.......................................................................................................................................................182.000.00--------------------------------------------1.00---------------1.00----------------------------------------------------------------
......................................................................................................................................................................................................................CTCTCGCCCGGCGGGT....................162.000.00--------------------2.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................................CAGGCGGGGACGTGC.........................................................................1512.002.00-----1.00-----1.00-----------------------------------------------------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGA.............................................................................................................................................................171.000.00---------------------------------------1.00-------------------------------------------------------------------------------------
..................................................................................GCGGCGGCGGCGCCTTTGG.....................................................................................................................................................191.000.00----------------------------------------------------------------1.00------------------------------------------------------------
.............................................................................GGGGCGCGGCGGCGGGGGC..........................................................................................................................................................191.000.00----1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................GCGGCGGCGCCTCTCGCCGC.................................................................................................................................................201.000.00-------1.00---------------------------------------------------------------------------------------------------------------------
........................CCGGAGGCTCCGGGACGTGGATACAGATGA....................................................................................................................................................................................................301.000.00---------------------------------------------------------1.00-------------------------------------------------------------------
...........................................................GGCGGGTCGGAGTCGGGGAG...........................................................................................................................................................................201.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CGGGCCTCAGGTGACGCGGCGGC..231.000.00-----------------------------------------------1.00-----------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTCGGGGC.................................................................................................................................................221.000.00----1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................GGCGGCGGCGCCTCTCGGCG..................................................................................................................................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------
........................CCGGAGGCTCCGGGACGGCT..............................................................................................................................................................................................................201.000.00-----------------------------------------------------------1.00-----------------------------------------------------------------
...........................................................................................................................................................GTTGGCCCAGGCGGGGAC.............................................................................1811.001.00-------------------1.00---------------------------------------------------------------------------------------------------------
...GCGCCGGGACGGGGCGCGAAGCCGGA.............................................................................................................................................................................................................................2611.001.00-------------------------------------------------1.00---------------------------------------------------------------------------
................................................................................GCGCGGCGGCGGCGCCTCT.......................................................................................................................................................1911.001.00---------------------------------1.00-------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCGCC.....................................................................................................................................................181.000.00------1.00----------------------------------------------------------------------------------------------------------------------
.................................................................................CGCGGCGGCGGCGCCTGG.......................................................................................................................................................181.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
........................................................................CGGGCGGGGCGCGGCGTCGG..............................................................................................................................................................201.000.00-------------------------------------------1.00---------------------------------------------------------------------------------
....................................................AAAGGCCGGCGGGTCAAAT...................................................................................................................................................................................191.000.00------------------------------------1.00----------------------------------------------------------------------------------------
....................................................................................GGCGGCGGCGCCTCTCGACG..................................................................................................................................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------
......................................................................................CGGCGGCGCCTCTCGGCGC.................................................................................................................................................191.000.00----------1.00------------------------------------------------------------------------------------------------------------------
................................................AGGTAAAGGCCGGCGCGC........................................................................................................................................................................................181.000.00-----------------------------1.00-----------------------------------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGCGTTG.........................................................................................................................................................211.000.00---------1.00-------------------------------------------------------------------------------------------------------------------
..........................GGAGGCTCCGGGACGTGGATAA..........................................................................................................................................................................................................221.000.00---------1.00-------------------------------------------------------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGTGGC..........................................................................................................................................................201.000.00----1.00------------------------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTGGCC...................................................................................................................................................2041.000.750.50----0.25----0.25------------------------------------------------------------------------------------------------------------------
.....................................................................................GCGGCGGCGCCTCTCGACGC.................................................................................................................................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCGCCT....................................................................................................................................................191.000.00----------------1.00------------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTCGCCC..................................................................................................................................................211.000.001.00----------------------------------------------------------------------------------------------------------------------------
.........................................................CCGGCGGGTCGGAGTGGA...............................................................................................................................................................................181.000.00-------------------------------------------------------------1.00---------------------------------------------------------------
............CGGGGCGCGAAGCCGGGC............................................................................................................................................................................................................................181.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GCCCGGCGGGCCTCA................1511.001.00------------------------------1.00----------------------------------------------------------------------------------------------
.................................CCGGGACGTGGATACAGGTA.....................................................................................................................................................................................................2011.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGAGGG..........................................................................................................................................................201.000.00-----------------------------------------------------1.00-----------------------------------------------------------------------
.............................GGCTCCGGGACGTGGCCG...........................................................................................................................................................................................................181.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
........................................................................CGGGCGGGGCGCGGCCGG................................................................................................................................................................181.000.00--------------------------1.00--------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTCGCCGC.................................................................................................................................................221.000.001.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GTGGCCCGGGCCCCCCGGC.............................................................................................191.000.00----------------------------1.00------------------------------------------------------------------------------------------------
....................................................................................GGCGGCGGCGCCTCTGTA....................................................................................................................................................181.000.00-------------------------------------1.00---------------------------------------------------------------------------------------
.....................................................................................GCGGCGGCGCCTCTCTGCG..................................................................................................................................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------
.................................CCGGGACGTGGATACAGATA.....................................................................................................................................................................................................201.000.00-----------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................CGGGCGGGGCGCGGCGTCG...............................................................................................................................................................191.000.00-------1.00---------------------------------------------------------------------------------------------------------------------
..........................GGAGGCTCCGGGACGTGGATAC..........................................................................................................................................................................................................2211.001.00---------1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................CGCGGCGGCGGCGCCGCGA......................................................................................................................................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................CGCGGCGGCGGCGCCGCGG......................................................................................................................................................191.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
...............................................................................GGCGCGGCGGCGGCGTCGG........................................................................................................................................................191.000.00----------------------1.00------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCT.......................................................................................................................................................1640.750.75----------------------------0.25---------------------------------------0.25---------------------------------0.25----------------------
...................................................................................CGGCGGCGGCGCCTCTGGC....................................................................................................................................................1940.750.750.50-----------------------------------------------------------------------------------------------0.25----------------------------
................................................................................GCGCGGCGGCGGCGCC..........................................................................................................................................................1670.570.57-----0.140.14--------------------------------------------------------------------0.29-------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTGGT....................................................................................................................................................1940.500.750.50----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................AAGGGGCTGGGCTAGGG.......................................................1720.500.50----------------------------------------------------------------------------0.50------------------------------------------------
..........................................GGATACAGGTAAAGGC................................................................................................................................................................................................1620.500.50-----0.50-----------------------------------------------------------------------------------------------------------------------
..................................................................................GCGGCGGCGGCGCCTCTGGCC...................................................................................................................................................2130.333.33------------------------------------0.33----------------------------------------------------------------------------------------
.............GGGGCGCGAAGCCGG..............................................................................................................................................................................................................................1560.330.33--------------------------------------------0.17-------------------------------------------------------------------------------0.17
..................................................................................GCGGCGGCGGCGCCTCTGGT....................................................................................................................................................2030.333.33--------------------------------------------------------------------------------------0.33--------------------------------------
..................................................................................GCGGCGGCGGCGCCTCTGA.....................................................................................................................................................1930.333.33------------------------------------------------------------------------0.33----------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTC......................................................................................................................................................1730.330.330.33----------------------------------------------------------------------------------------------------------------------------
................................................................................GCGCGGCGGCGGCGCCGG........................................................................................................................................................1870.290.57-----0.14------------------------------------------------------------------------------0.14----------------------------------------
......................................................................GTCGGGCGGGGCGCG.....................................................................................................................................................................1570.290.29---------------------------------0.140.14------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTTGCC...................................................................................................................................................2040.250.75----------0.25------------------------------------------------------------------------------------------------------------------
..............................GCTCCGGGACGTGGA.............................................................................................................................................................................................................1540.250.25-----------0.25-----------------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTTAAC...................................................................................................................................................2040.250.75----------0.25------------------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTGGGC...................................................................................................................................................2040.250.750.25----------------------------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTTGA....................................................................................................................................................1940.250.75-----------------------------------------0.25-----------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTGCA....................................................................................................................................................1940.250.750.25----------------------------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTTCA....................................................................................................................................................1940.250.750.25----------------------------------------------------------------------------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTTCC....................................................................................................................................................1940.250.75------------------------------------------------------------------------------------------------------------0.25----------------
...................................................................................CGGCGGCGGCGCCTCTGTA....................................................................................................................................................1940.250.75------------------------------------------------------------------0.25----------------------------------------------------------
...................................................................................CGGCGGCGGCGCCTCTTG.....................................................................................................................................................1840.250.750.25----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TGCCAAGGGGCTGGGC............................................................1660.170.17----------------0.17------------------------------------------------------------------------------------------------------------
..........................................................................GGCGGGGCGCGGCGGCGGCG............................................................................................................................................................2060.170.17---------------------------------------------0.17-------------------------------------------------------------------------------
................................................................................GCGCGGCGGCGGCGCCGGC.......................................................................................................................................................1970.140.57---------------------------------------------0.14-------------------------------------------------------------------------------
...........................................................................GCGGGGCGCGGCGGCGGC.............................................................................................................................................................1890.110.11----------0.11------------------------------------------------------------------------------------------------------------------

Antisense strand
GGAGCGCCGGGACGGGGCGCGAAGCCGGAGGCTCCGGGACGTGGATACAGGTAAAGGCCGGCGGGTCGGAGTCGGGCGGGGCGCGGCGGCGGCGCCTCTCGGAGGGACCTGGCCTCGGCCGGGCCCTACCCAGCCGCGGTGGCCCGGGCCCCCACGTTGGCCCAGGCGGGGACGTGCCAAGGGGCTGGGCTAGGGTTGCCGCTGGCCTGGCCGCCTCTCGCCCGGCGGGCCTCAGGTGACGCGGCCGCGG
...............................................................................((((((((.(((((.......((((((.((((((....)))))))))).))..))))).)).(((.(((((........))))).))).....))))))........................................................................
..............................................................................79....................................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040009(GSM532894)
G727T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343336SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532874(GSM532874)
G699T. (cervix)
SRR189782TAX577742(Rovira)
total RNA. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR191583(GSM715693)
97genomic small RNA (size selected RNA from t. (breast)
SRR191495(GSM715605)
159genomic small RNA (size selected RNA from . (breast)
SRR040038(GSM532923)
G531N. (cervix)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM532879(GSM532879)
G659N. (cervix)
SRR038863(GSM458546)
MM603. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR040030(GSM532915)
G013N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532880(GSM532880)
G659T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
....................................................................................GGCGGCGGCGCCTCTCCC.................................................................................................................................................... 187.000.00--------2.00--------2.00-----------------1.00-----1.00--------------1.00--------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGGGA........................................................................................................................................................... 193.000.00--1.002.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................GGCGGCGGCGCCTCTCCCC................................................................................................................................................... 192.000.00--------1.00----------1.00---------------------------------------------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGGC............................................................................................................................................................ 182.000.00--2.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CGTGGGGGCCCGGGCCA.............................................................................................. 1712.002.00---------------2.00-------------------------------------------------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGGCGC.......................................................................................................................................................... 201.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................GGCGGGGCGCGGCGGCGGC............................................................................................................................................................. 191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.......CGGGACGGGGCGCGAACGC................................................................................................................................................................................................................................ 191.000.00--------------------------------------1.00--------------------------------------------------------------------------------------
................................................................................GCGCCGCCGCCGCGC........................................................................................................................................................... 1501.001.00--------------------------------------------------1.00--------------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGCGC........................................................................................................................................................... 191.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
............................................................................CGGGGCGCGGCGGCGGGGC........................................................................................................................................................... 191.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
.......CGGGACGGGGCGCGAAGTC................................................................................................................................................................................................................................ 191.000.00-------------------------------------------------------1.00---------------------------------------------------------------------
....................................................................................GGCGGCGGCGCCTCTCCC.................................................................................................................................................... 181.000.00---------------------------------------------------1.00-------------------------------------------------------------------------
....................................................................................GGCGGCGGCGCCTCTTA..................................................................................................................................................... 171.000.00-------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................GGCGCCGCCGCCGCGC.......................................................................................................................................................... 1670.140.14------------0.14----------------------------------------------------------------------------------------------------------------