ID: uc003jqg.3_intron_20_0_chr5_55111252_f.3p
GENE: (21)
chr5:55112091-55112340+


(8)
CELL-LINE
(1)
HEART
(2)
LIVER
(2)
OTHER
(3)
SKIN

Sense strand
TGCAATTTAGATTTCCTCATTTGACAGGAGCCTTTTTTCAGGTGAATCAGATTTAGTGAGAATAAAGTTCTTTGATTATTTGGGGAAGACATGGTAGATACTTTGAGTCCTTGCTCTCAGTCTGAGTGATGTAACTTTAAAGCTGTCATAAAATTAAATGTTTGTTTGTTTCTTTTTTTTTTTTTTTAAATAATTACCAGGGCAAGAGCACTTTGAACACAGCTGGGTTTTCTTCTTCACAAGCTCCCAA
.........................................................((((((...))))))((((((((((..(((((.......((((((((((((..((((((.......))))))....)))).)))).))))..((((..(((((......)))))..))))..)))))..))))))))))......................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189782SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAAACAG.....................................................26177.000.0094.0069.00-9.00--5.00---------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTAAATTCAA.......................................................2527.000.0013.0010.00-2.00-1.001.00---------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAAACAT.....................................................2611.000.005.006.00--------------
..................................................................................................................................................................TGTTTGTTTCTTTTTTTTTTTTTTGGC.............................................................274.000.00--4.00-------------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTTTTTTTGG...............................................................273.000.00--1.00-2.00-----------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTTTTTTTTTTTGC...........................................................313.000.00--3.00-------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAACAG......................................................253.000.00-1.00-1.00--1.00---------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTTGGAG...............................................................262.000.00--2.00-------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATACCAG......................................................252.000.00-1.00-1.00------------
...................................................................................................................................................................GTTTGTTTCTTTTTTTTTTTCT.................................................................222.000.00--2.00-------------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTTTTGC...............................................................262.000.00--2.00-------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAAACGG.....................................................262.000.001.001.00--------------
...................................................................................................................................................................GTTTGTTTCTTTTTTTTTTCTA.................................................................221.000.00-----1.00----------
..............................................................................................................................................................TGTTTGTTTGTTTCTTTTTTTTTTGG..................................................................261.000.00--1.00-------------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTGCTG................................................................251.000.00-----1.00----------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTCCGG...................................................................231.000.00----1.00-----------
..................................................................................................................................................................TGTTTGTTTCTTTTTTTTTGGA..................................................................221.000.00----1.00-----------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTTTTTTTTTCCTT...........................................................311.000.00-----1.00----------
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTTACAT...............................................................231.000.00-----1.00----------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTTTTTTCG.............................................................281.000.00--1.00-------------
...................................................................................................................................................................GTTTGTTTCTTTTTTTTTTTTTTTGT.............................................................261.000.00-1.00--------------
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTTTTTGGCT............................................................261.000.00--1.00-------------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTAAATATTTG......................................................271.000.00---1.00------------
.......................................................................................................................................................................GTTTCTTTTTTTTTTTTTTTAGCC...........................................................241.000.00--1.00-------------
......................................................................................................................................................................TGTTTCTTTTTTTTTTTTTTTATTAG..........................................................261.000.00----1.00-----------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAATCAG.....................................................261.000.00-1.00--------------
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTTTTTTATTTT..........................................................281.000.00-----1.00----------
...............................................................................................................................................................GTTTGTTTGTTTCTTTTTTTTTGCTT.................................................................261.000.00--1.00-------------
...................................................................................................................................................................GTTTGTTTCTTTTTTTTTTTTTTTATT............................................................271.000.00-----1.00----------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTAAATAATTTG.....................................................281.000.00-1.00--------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAATCCG.....................................................261.000.001.00---------------
.....................................................................................................................................................................TTGTTTCTTTTTTTTTTTTTTGAGC............................................................251.000.00----1.00-----------
......................................................................................................................................................................TGTTTCTTTTTTTTTTTTTTTATCCC..........................................................261.000.00--1.00-------------
.....................................................................................................................................................................TTGTTTCTTTTTTTTTTCCCA................................................................211.000.00--1.00-------------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTTTTTGG.................................................................251.000.00--1.00-------------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTTTTTTTTGAGC............................................................301.000.00--1.00-------------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTTTTTTTTTTGC............................................................301.000.00--1.00-------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAAAAGG.....................................................261.000.001.00---------------
..................................................................................................................................................................TGTTTGTTTCTTTTTTTTTTTTTTGG..............................................................261.000.00--1.00-------------
...................................................................................................................................................................GTTTGTTTCTTTTTTTTTTTTTTTCC.............................................................261.000.00----1.00-----------
......................................................................................................................................................................TGTTTCTTTTTTTTTTTTTTTACCCC..........................................................261.000.00--1.00-------------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTTCTC................................................................251.000.00--1.00-------------
.....................................................................................................................................................................TTGTTTCTTTTTTTTTTTTTTCGCG............................................................251.000.00-----1.00----------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTTTCT................................................................251.000.00--1.00-------------
...................................................................................................................................................................GTTTGTTTCTTTTTTTTTTTTTTTCAAT...........................................................281.000.00-----1.00----------
..............................................................................................................................................................TGTTTGTTTGTTTCTTTTTTTCTG....................................................................241.000.00----1.00-----------
.............................................................................ATTTGGGGAAGACATGGTAGATACTTTG.................................................................................................................................................2811.001.00-------------1.00--
................................................................................................................................................................TTTGTTTGTTTCTTTTTTAATC....................................................................221.000.00--1.00-------------
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTTTTTTAAAGTAG........................................................301.000.00--1.00-------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTAAATAAACG......................................................261.000.001.00---------------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTTTTTTTTACC.............................................................291.000.00--1.00-------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTAAATTCAC.......................................................251.000.00-----1.00----------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTAAATAATTGG.....................................................271.000.00-1.00--------------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAACCAT.....................................................261.000.001.00---------------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTTGGGG...............................................................261.000.00--1.00-------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTAAATTGAA.......................................................251.000.00-1.00--------------
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTTTTTGGTC............................................................261.000.00----1.00-----------
..................................................................................................................................................................TGTTTGTTTCTTTTTTTTTTTTTTGGAG............................................................281.000.00----1.00-----------
............................................................................................................................................................................TTTTTTTTTTTTTTTAAATAATTCAAG...................................................271.000.00------1.00---------
..................................................................................................................................................................TGTTTGTTTCTTTTTTTTTTTTTTAATG............................................................281.000.00--1.00-------------
........................................................................................................................................................................TTTCTTTTTTTTTTTTTTTAAATAATTG......................................................281.000.00------1.00---------
...........................................................GAATAAAGTTCTTTGACA.............................................................................................................................................................................181.000.00--------------1.00-
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTTTTTCTTA............................................................261.000.00--1.00-------------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTAATG................................................................251.000.00-----1.00----------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAAACCG.....................................................261.000.00------1.00---------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAACCT......................................................251.000.001.00---------------
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTATG.................................................................211.000.00-----1.00----------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTAAATACCTG......................................................261.000.001.00---------------
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTTTTTGAGG............................................................261.000.00----1.00-----------
............................................................................................................................................................AATGTTTGTTTGTTTCTTTGCC........................................................................221.000.00--1.00-------------
................................................................................................................................................................TTTGTTTGTTTCTTTTTTTTTTTTTTGGA.............................................................291.000.00--1.00-------------
............................................................................TATTTGGGGAAGACACTTT...........................................................................................................................................................191.000.00-----1.00----------
...........................................................................................................................................................................CTTTTTTTTTTTTTTTAAATAACTTG.....................................................261.000.00---1.00------------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTTCGG................................................................251.000.00--1.00-------------
......................................................................................................................................................................TGTTTCTTTTTTTTTTTTTTTACTTC..........................................................261.000.00--1.00-------------
..................................................................................................................................................................TGTTTGTTTCTTTTTTTTTTTTTTGCG.............................................................271.000.00----1.00-----------
..................................................................................................................................................................TGTTTGTTTCTTTTTTTTTTTTTGGA..............................................................261.000.00--1.00-------------
......................................................................................................................................................................TGTTTCTTTTTTTTTTTTTTTAGTTT..........................................................261.000.001.00---------------
..........................................................................................................................................................................TCTTTTTTTTTTTTTTTAAATAAAATC.....................................................271.000.00-1.00--------------
....................................................................................................................................................................TTTGTTTCTTTTTTTTTTTTTTGGG.............................................................251.000.00----1.00-----------
.................................................................................................................................................................TTGTTTGTTTCTTTTTTTTTTTTTTGG..............................................................271.000.00--1.00-------------
..................................................................................................................................................................TGTTTGTTTCTTTTTTTTTTTTTTTGGA............................................................281.000.00----1.00-----------
.........................................................................................................................................................................TTCTTTTTTTTTTTTTTTAAATAAT........................................................2520.500.500.50---------------
........................................................................................................................................................................TTTCTTTTTTTTTTTTTTTAAATAAG........................................................2690.220.110.22---------------
..................................................................................................................................................................................................................CTTTGAACACAGCTGG........................1660.170.17---------------0.17
........................................................................................................................................................................TTTCTTTTTTTTTTTTTTTAAATAA.........................................................2590.110.110.11---------------

Antisense strand
TGCAATTTAGATTTCCTCATTTGACAGGAGCCTTTTTTCAGGTGAATCAGATTTAGTGAGAATAAAGTTCTTTGATTATTTGGGGAAGACATGGTAGATACTTTGAGTCCTTGCTCTCAGTCTGAGTGATGTAACTTTAAAGCTGTCATAAAATTAAATGTTTGTTTGTTTCTTTTTTTTTTTTTTTAAATAATTACCAGGGCAAGAGCACTTTGAACACAGCTGGGTTTTCTTCTTCACAAGCTCCCAA
.........................................................((((((...))))))((((((((((..(((((.......((((((((((((..((((((.......))))))....)))).)))).))))..((((..(((((......)))))..))))..)))))..))))))))))......................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189782SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
.......................ACAGGAGCCTTTTTTCAG................................................................................................................................................................................................................. 181.000.00--------1.00-------
...................TTTGACAGGAGCCTTTTTATC.................................................................................................................................................................................................................. 211.000.00-------1.00--------
............................................................................................................CCTTGCTCTCAGTCTCCAC........................................................................................................................... 191.000.00------------1.00---
.......................................................................................................................................................................................................GGGCAAGAGCACTTTGCCAG............................... 201.000.00----------1.00-----
..............CCTCATTTGACAGGAGC........................................................................................................................................................................................................................... 171.000.00-----------1.00----
.................................................................AGTTCTTTGATTATTCTG....................................................................................................................................................................... 181.000.00---------1.00------