ID: uc003joa.2_intron_9_0_chr5_43556102_r.5p
GENE: (1)
chr5:43556721-43556970-


(1)
AGO2.ip
(15)
B-CELL
(2)
BRAIN
(12)
BREAST
(42)
CELL-LINE
(13)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(3)
HELA
(9)
LIVER
(2)
OTHER
(1)
RRP40.ip
(26)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
GAGGAGGCGGAGGAGGAGGAGCATGTCGGACGGTTTCGATCGGGCCCCAGGTGCTGGTCGGGGCCGGAGCCGGGGCCTGGGCCGCGGAGGGGGCGGGCCTGAGGGCGGCGGTTTCCCGAACGGAGCGGGGCCTGCTGAGCGGGCGCGGCACCAGCCGCCGCAACCCAAAGCCCCGGGCTTCCTGCAGCCACCGCCGCTGCGCCAGCCCAGGACGACCCCGCCGCCAGGGGCCCAGTGCGAGGTCCCCGCC
...................................................(((((.(((((.(((...(((.(((....))).)))......))).)))))...)))))............................................................................................................................................
..................................................51.............................................................114......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
TAX577739(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577579(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR040034(GSM532919)
G001N. (cervix)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM532888(GSM532888)
G761T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532929(GSM532929)
G702N. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040036(GSM532921)
G243N. (cervix)
SRR040023(GSM532908)
G575T. (cervix)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359191(GSM359191)
HepG2_3pM_5. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038853(GSM458536)
MELB. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
TAX577589(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...GAGGCGGAGGAGGAGGACGA...................................................................................................................................................................................................................................206.000.00------1.001.00---------------------1.00---------1.00--1.00--------------1.00--------------------------------------------------------------------------
....................................................GCTGGTCGGGGCCGGAGC....................................................................................................................................................................................1815.005.005.00-----------------------------------------------------------------------------------------------------------------------------------
..................................TTCGATCGGGCCCCAGG.......................................................................................................................................................................................................1715.005.00----2.001.00-------------------1.00------------------------------------------1.00---------------------------------------------------------------
..................GAGCATGTCGGACGGTTT......................................................................................................................................................................................................................1814.004.00------2.00---1.00----------------------------------------------------------------1.00--------------------------------------------------------
.......................................................................................AGGGGGCGGGCCTGAGGGCGGCGGC..........................................................................................................................................2513.001.00--1.00----------2.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGCTGGTCGGGGCCGGAGC....................................................................................................................................................................................2013.003.00-2.00--------------------1.00-------------------------------------------------------------------------------------------------------------
................................................AGGTGCTGGTCGGGGCCGGAGC....................................................................................................................................................................................2213.003.00-3.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................CCGGAGCCGGGGCCTGGGC........................................................................................................................................................................1913.003.003.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................GGGCCCCAGGTGCTGGTCGGG............................................................................................................................................................................................2113.003.001.001.00----------------------------------------------------------------------------------------------------------------1.00-----------------
.............AGGAGGAGCATGTCGGACGAA........................................................................................................................................................................................................................213.000.00-----------------3.00------------------------------------------------------------------------------------------------------------------
.............................................CCCAGGTGCTGGTCGGGGC..........................................................................................................................................................................................1913.003.003.00-----------------------------------------------------------------------------------------------------------------------------------
....................................................GCTGGTCGGGGCCGGAGCCGG.................................................................................................................................................................................2113.003.00----1.00---------1.00--------------------------------------------------------------------------------------1.00------------------------------
......................ATGTCGGACGGTTTCGA...................................................................................................................................................................................................................1713.003.003.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GCCCCGGGCTTCCTGCAGC..............................................................1922.502.50---2.50--------------------------------------------------------------------------------------------------------------------------------
........GGAGGAGGAGGAGCATTA................................................................................................................................................................................................................................182.000.00-------2.00----------------------------------------------------------------------------------------------------------------------------
........GGAGGAGGAGGAGCATGTCGA.............................................................................................................................................................................................................................212.000.00-------------------2.00----------------------------------------------------------------------------------------------------------------
...GAGGCGGAGGAGGAGGATGA...................................................................................................................................................................................................................................202.000.00-------1.00-----------------------------------------------------------------------------------------------1.00----------------------------
................AGGAGCATGTCGGACGGT........................................................................................................................................................................................................................1812.002.00---1.00------1.00-------------------------------------------------------------------------------------------------------------------------
..........................CGGACGGTTTCGATCGGG..............................................................................................................................................................................................................1812.002.00----1.00-----1.00-------------------------------------------------------------------------------------------------------------------------
.............................ACGGTTTCGATCGGGCCC...........................................................................................................................................................................................................1812.002.00-----1.00------1.00-----------------------------------------------------------------------------------------------------------------------
...................................TCGATCGGGCCCCAGG.......................................................................................................................................................................................................1612.002.00-----2.00------------------------------------------------------------------------------------------------------------------------------
.................................TTTCGATCGGGCCCCAGGTG.....................................................................................................................................................................................................2012.002.00------1.00--------------------------------------1.00--------------------------------------------------------------------------------------
.................GGAGCATGTCGGACGGTT.......................................................................................................................................................................................................................1812.002.00-1.00------------1.00---------------------------------------------------------------------------------------------------------------------
......................................................................CGGGGCCTGGGCCGCGGAGGG...............................................................................................................................................................2112.002.00-1.00------------------1.00---------------------------------------------------------------------------------------------------------------
................................................AGGTGCTGGTCGGGGCC.........................................................................................................................................................................................1712.002.00------------------------1.00-----------------------1.00-----------------------------------------------------------------------------------
.....................CATGTCGGACGGTTTCG....................................................................................................................................................................................................................1712.002.00-----------2.00------------------------------------------------------------------------------------------------------------------------
.....GGCGGAGGAGGAGGATGAC..................................................................................................................................................................................................................................192.000.00----------------------1.00-----------------------------------------------------1.00-------------------------------------------------------
....AGGCGGAGGAGGAGGAGCA...................................................................................................................................................................................................................................1912.002.00------------------2.00-----------------------------------------------------------------------------------------------------------------
.....................CATGTCGGACGGTTTCGA...................................................................................................................................................................................................................1812.002.00-----------------------------------------------------------------1.00------------1.00-----------------------------------------------------
......................ATGTCGGACGGTTTCG....................................................................................................................................................................................................................1612.002.00----2.00-------------------------------------------------------------------------------------------------------------------------------
........................GTCGGACGGTTTCGATCGGGC.............................................................................................................................................................................................................2112.002.00-2.00----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................GGAGGGGGCGGGCCTTT....................................................................................................................................................172.000.00--------1.00-------------------------------------------------------------------------------------------------1.00-------------------------
......................................................TGGTCGGGGCCGGAG.....................................................................................................................................................................................1512.002.00---------1.00--------------1.00-----------------------------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGAGCATGTCGGAC...........................................................................................................................................................................................................................2712.002.00--------------------1.00----------------------------------------------------------------------------1.00----------------------------------
....AGGCGGAGGAGGAGGCGAA...................................................................................................................................................................................................................................192.000.00-----------------------------1.00------------1.00-----------------------------------------------------------------------------------------
...........................................GCCCCAGGTGCTGGTCGG.............................................................................................................................................................................................1822.002.00------------------------0.50---------------------1.50-------------------------------------------------------------------------------------
...................................................................................GCGGAGGGGGCGGGCTC......................................................................................................................................................172.000.00--------2.00---------------------------------------------------------------------------------------------------------------------------
........GGAGGAGGAGGAGCATGTC...............................................................................................................................................................................................................................1912.002.00---------------------------2.00--------------------------------------------------------------------------------------------------------
.AGGAGGCGGAGGAGGAGGAGCATGCCGG.............................................................................................................................................................................................................................282.000.00-------------2.00----------------------------------------------------------------------------------------------------------------------
...................................................................................GCGGAGGGGGCGGGCTCCG....................................................................................................................................................192.000.00------------------------------------------------------1.00------------1.00----------------------------------------------------------------
.........................TCGGACGGTTTCGATCGGGCCCCAGGCGC....................................................................................................................................................................................................292.000.00--2.00---------------------------------------------------------------------------------------------------------------------------------
.............AGGAGGAGCATGTCGGACGGT........................................................................................................................................................................................................................2111.001.00--------------------------1.00---------------------------------------------------------------------------------------------------------
..............................CGGTTTCGATCGGGC.............................................................................................................................................................................................................1511.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...........................GGACGGTTTCGATCGGGC.............................................................................................................................................................................................................1811.001.00------1.00-----------------------------------------------------------------------------------------------------------------------------
..GGAGGCGGAGGAGGAGGCGTT...................................................................................................................................................................................................................................211.000.00-------------------------------------------------1.00----------------------------------------------------------------------------------
...GAGGCGGAGGAGGAGGAGCATGT................................................................................................................................................................................................................................2311.001.00-------------------------------------1.00----------------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGCAA....................................................................................................................................................................................................................................181.000.00-------------------------------------------1.00----------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGCGTT...................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------1.00-----------------------
....................GCATGTCGGACGGTTT......................................................................................................................................................................................................................1611.001.00-----------------------------------------------------1.00------------------------------------------------------------------------------
........................GTCGGACGGTTTCGATCGG...............................................................................................................................................................................................................1911.001.00--------------------------------------1.00---------------------------------------------------------------------------------------------
......................................................................................................................AACGGAGCGGGGCCTCTGT.................................................................................................................191.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGAGCATGCCGG.............................................................................................................................................................................................................................251.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCGGTTTCCCGAACGGAGCG...........................................................................................................................2211.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------
......GCGGAGGAGGAGGAGCATGT................................................................................................................................................................................................................................2011.001.00------------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................CGGAGGGGGCGGGCCTGA....................................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------------------------1.00---------------------
..................................TTCGATCGGGCCCCAGGTGCTGGT................................................................................................................................................................................................2411.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------
............................GACGGTTTCGATCGGGCCC...........................................................................................................................................................................................................1911.001.00--------------------------------------------------------------1.00---------------------------------------------------------------------
...........................GGACGGTTTCGATCGGGCCCC..........................................................................................................................................................................................................2111.001.00-----------------------------------------1.00------------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGAGTT...................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------------------1.00---------------------------
........................................................GTCGGGGCCGGAGCCGG.................................................................................................................................................................................1731.001.000.67-----------------------0.33-----------------------------------------------------------------------------------------------------------
................................GTTTCGATCGGGCCCCAGGTGCTGG.................................................................................................................................................................................................2511.001.00-----------------------------------------1.00------------------------------------------------------------------------------------------
............................GACGGTTTCGATCGGGC.............................................................................................................................................................................................................1711.001.00---------------------------------1.00--------------------------------------------------------------------------------------------------
.................................................GGTGCTGGTCGGGGCCGGA......................................................................................................................................................................................1911.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
...GAGGCGGAGGAGGAGGATG....................................................................................................................................................................................................................................191.000.00---------------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................CTGGTCGGGGCCGGAGCC...................................................................................................................................................................................1811.001.00--------------------------------------------------------1.00---------------------------------------------------------------------------
....................................................................................................................................TGCTGAGCGGGCGCGGCAAC..................................................................................................201.000.00-----------------------1.00------------------------------------------------------------------------------------------------------------
..GGAGGCGGAGGAGGATTA......................................................................................................................................................................................................................................181.000.00-------1.00----------------------------------------------------------------------------------------------------------------------------
...................AGCATGTCGGACGGTTTCGATCGGGCCCCA.........................................................................................................................................................................................................3011.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...GAGGCGGAGGAGGAGGAGCATGCCGG.............................................................................................................................................................................................................................261.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGGAGGGGGCGGGCCTGCGTG.................................................................................................................................................221.000.00---------------------------------------------------------------------1.00--------------------------------------------------------------
.......................................................................................AGGGGGCGGGCCTGAGGGCGGCGG...........................................................................................................................................2411.001.00----------------------------------------------------------------------------------------------1.00-------------------------------------
.AGGAGGCGGAGGAGGAGGATA....................................................................................................................................................................................................................................211.000.00------1.00-----------------------------------------------------------------------------------------------------------------------------
........GGAGGAGGAGGAGCATGCCGA.............................................................................................................................................................................................................................211.000.00-------------------1.00----------------------------------------------------------------------------------------------------------------
....................................................GCTGGTCGGGGCCGGAGCCG..................................................................................................................................................................................2011.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------
............GAGGAGGAGCATGTCGGACGGTTTTTTT..................................................................................................................................................................................................................281.000.00----------------------------------------1.00-------------------------------------------------------------------------------------------
..GGAGGCGGAGGAGGAGGACGG...................................................................................................................................................................................................................................211.000.00--------------------------------------------------1.00---------------------------------------------------------------------------------
....................................................................................CGGAGGGGGCGGGCCGGTT...................................................................................................................................................191.000.00--------------------------------------1.00---------------------------------------------------------------------------------------------
...................................................................................GCGGAGGGGGCGGGCTCC.....................................................................................................................................................181.000.00----------------------1.00-------------------------------------------------------------------------------------------------------------
.....GGCGGAGGAGGAGGACGGC..................................................................................................................................................................................................................................191.000.00------------------------------1.00-----------------------------------------------------------------------------------------------------
.AGGAGGCGGAGGAGGATGAT.....................................................................................................................................................................................................................................201.000.00---------------1.00--------------------------------------------------------------------------------------------------------------------
..............................CGGTTTCGATCGGGCCCCAGGTG.....................................................................................................................................................................................................2311.001.00------------1.00-----------------------------------------------------------------------------------------------------------------------
..GGAGGCGGAGGAGGAGGATT....................................................................................................................................................................................................................................201.000.00-------1.00----------------------------------------------------------------------------------------------------------------------------
..............................CGGTTTCGATCGGGCCC...........................................................................................................................................................................................................1711.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------
......................................................TGGTCGGGGCCGGAGCC...................................................................................................................................................................................1711.001.00---------------------------------------------------------------------------------------------------------------1.00--------------------
..................................................................................................CTGAGGGCGGCGGTTTCCCGAACGGAGCGGGGCCTGCTGA................................................................................................................4011.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------
...............GAGGAGCATGTCGGACGGTTT......................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------------------------1.00---------------------------------
....................................................................................CGGAGGGGGCGGGCCTTC....................................................................................................................................................181.000.00----------------------------------------------------------------------1.00-------------------------------------------------------------
.....................................................CTGGTCGGGGCCGGAGC....................................................................................................................................................................................1711.001.00--------------------------------1.00---------------------------------------------------------------------------------------------------
........................................CGGGCCCCAGGTGCTGGTCGGGG...........................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------1.00---------------------------------------
....................................................GCTGGTCGGGGCCGGAGCCGGGG...............................................................................................................................................................................2311.001.00-------------------------------------------------------1.00----------------------------------------------------------------------------
..................................................................................................CTGAGGGCGGCGGTTTCCCGAACG................................................................................................................................2411.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------
...GAGGCGGAGGAGGAGGCT.....................................................................................................................................................................................................................................181.000.00-------------------------------------------1.00----------------------------------------------------------------------------------------
..............................................................................GGGCCGCGGAGGGGGCGGGC........................................................................................................................................................2011.001.00----------------------------1.00-------------------------------------------------------------------------------------------------------
.................................TTTCGATCGGGCCCCAGCGGC....................................................................................................................................................................................................211.000.00---------1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CCCGGGCTTCCTGCAGC..............................................................1721.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGACGCG..................................................................................................................................................................................................................................201.000.00------------------------------------------------------------1.00-----------------------------------------------------------------------
....................................................................................CGGAGGGGGCGGGCCAGT....................................................................................................................................................181.000.00------------------------------------------------------------------1.00-----------------------------------------------------------------
....AGGCGGAGGAGGAGGAGCATGTCGGACGGTC.......................................................................................................................................................................................................................311.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGAGTA...................................................................................................................................................................................................................................191.000.00----------------------------------1.00-------------------------------------------------------------------------------------------------
.....GGCGGAGGAGGAGGAGTATT.................................................................................................................................................................................................................................201.000.00--------------------------------------------1.00---------------------------------------------------------------------------------------
...................................TCGATCGGGCCCCAGGTGCT...................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------1.00--------------------------
..........................................................CGGGGCCGGAGCCGGCGG..............................................................................................................................................................................181.000.00------------------------------------------------------------------------------------1.00-----------------------------------------------
....................................................................................CGGAGGGGGCGGGCCGGT....................................................................................................................................................181.000.00----------------------------------------------------------------------------------------------------1.00-------------------------------
........GGAGGAGGAGGAGCATTTCA..............................................................................................................................................................................................................................201.000.00----------------------------------------1.00-------------------------------------------------------------------------------------------
...................AGCATGTCGGACGGT........................................................................................................................................................................................................................1511.001.00--------------------------1.00---------------------------------------------------------------------------------------------------------
................................GTTTCGATCGGGCCCCAG........................................................................................................................................................................................................1811.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------
.................................TTTCGATCGGGCCCCAGGTGC....................................................................................................................................................................................................2111.001.00---------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................CCGCGGAGGGGGCGGTCGC......................................................................................................................................................191.000.00-----------------------------------------------------------------------------1.00------------------------------------------------------
.....GGCGGAGGAGGAGGAGTCAG.................................................................................................................................................................................................................................201.000.00----------1.00-------------------------------------------------------------------------------------------------------------------------
............................GACGGTTTCGATCGGGCC............................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------------------------------1.00-------------------
..............................................................................................GGGCCTGAGGGCGGCCGCT.........................................................................................................................................191.000.00---------1.00--------------------------------------------------------------------------------------------------------------------------
...........................GGACGGTTTCGATCGGGCCCCAG........................................................................................................................................................................................................2311.001.00-----------------------1.00------------------------------------------------------------------------------------------------------------
................................................................................................................TTCCCGAACGGAGCGGGGCCTG....................................................................................................................2211.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
..............................................................GCCGGAGCCGGGGCCTGGG.........................................................................................................................................................................1911.001.00-------------------------------1.00----------------------------------------------------------------------------------------------------
................................................AGGTGCTGGTCGGGGCCGG.......................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------1.00----------------------------------------
............................GACGGTTTCGATCGGGCCCCAGGAAT....................................................................................................................................................................................................261.000.00----------------------------------------------------------------1.00-------------------------------------------------------------------
...............GAGGAGCATGTCGGACGGTTTC.....................................................................................................................................................................................................................2211.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------
.................GGAGCATGTCGGACGGTTTCGATCG................................................................................................................................................................................................................2511.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGGAGGGGGCGGGCCTGAGGGCGGCGGTT.........................................................................................................................................2911.001.00---------------------------------------------------------------------------------------1.00--------------------------------------------
....................................................................................CGGAGGGGGCGGGCCAA.....................................................................................................................................................171.000.00--------1.00---------------------------------------------------------------------------------------------------------------------------
.......CGGAGGAGGAGGAGCATGTCGGACG..........................................................................................................................................................................................................................2511.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------
..................................TTCGATCGGGCCCCAGGTG.....................................................................................................................................................................................................1911.001.00-----------------------1.00------------------------------------------------------------------------------------------------------------
..............................CGGTTTCGATCGGGCCCCAGGTGCTGGTCGGGGC..........................................................................................................................................................................................3411.001.00-----1.00------------------------------------------------------------------------------------------------------------------------------
....................GCATGTCGGACGGTTTCGA...................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------------------1.00--------------------------------------------------
.....GGCGGAGGAGGAGGACGA...................................................................................................................................................................................................................................181.000.00-----------------------------------1.00------------------------------------------------------------------------------------------------
..................GAGCATGTCGGACGGTTTC.....................................................................................................................................................................................................................1911.001.00--------------------1.00---------------------------------------------------------------------------------------------------------------
..GGAGGCGGAGGAGGAGGCGAC...................................................................................................................................................................................................................................211.000.00---------------------1.00--------------------------------------------------------------------------------------------------------------
.....................................................CTGGTCGGGGCCGGAGCCGGGG...............................................................................................................................................................................2211.001.00---------------------------------------------------------------------------------------------1.00--------------------------------------
......................ATGTCGGACGGTTTC.....................................................................................................................................................................................................................1511.001.00-------------------------------1.00----------------------------------------------------------------------------------------------------
....................................CGATCGGGCCCCAGGTGC....................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------
................................GTTTCGATCGGGCCCCAGGT......................................................................................................................................................................................................2011.001.00---------------------------------------1.00--------------------------------------------------------------------------------------------
................AGGAGCATGTCGGACGGC........................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------1.00---------------------------------------------------------
..................................................................................................................................................................................................................................GGGGCCCAGTGCGAGTA.......171.000.00--------1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................GGCGGGCCTGAGGGCGGCGGAAT........................................................................................................................................231.000.00-----------------------------------------------------------------------------------------------------------------1.00------------------
............................................................................CTGGGCCGCGGAGGGGGC............................................................................................................................................................1811.001.00--------------------------------------------------------------------------------------1.00---------------------------------------------
................................................AGGTGCTGGTCGGGGCCGGCG.....................................................................................................................................................................................2111.001.00----------------1.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................CTGAGGGCGGCGGTTTC.......................................................................................................................................1711.001.00-----------------------------------------------1.00------------------------------------------------------------------------------------
..................GAGCATGTCGGACGGTTTCG....................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------1.00--------------------------------
....................................................................................CGGAGGGGGCGGGCCGGTC...................................................................................................................................................191.000.00---------------------------------------------------------------1.00--------------------------------------------------------------------
....AGGCGGAGGAGGAGGAGCATGT................................................................................................................................................................................................................................2211.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
..................GAGCATGTCGGACGGTTTAGAT..................................................................................................................................................................................................................2211.004.00----------------------------------------------------------------------------------1.00-------------------------------------------------
...............................GGTTTCGATCGGGCCCCAGAGC.....................................................................................................................................................................................................221.000.00-----------1.00------------------------------------------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGCGT....................................................................................................................................................................................................................................181.000.00------------------1.00-----------------------------------------------------------------------------------------------------------------
...................AGCATGTCGGACGGTTTCGATCGGG..............................................................................................................................................................................................................2511.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------
......................................................TGGTCGGGGCCGGAGCCGGGGCCTGG..........................................................................................................................................................................2611.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------
...............................................................CCGGAGCCGGGGCCTGGGCCGCG....................................................................................................................................................................2311.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................CGGGCCTGAGGGCGGCGGT..........................................................................................................................................1911.001.00---------------------------------------------------1.00--------------------------------------------------------------------------------
.........................................................................................................CGGCGGTTTCCCGAAGGCG..............................................................................................................................191.000.00---------------------------------------------1.00--------------------------------------------------------------------------------------
...........................................................................CCTGGGCCGCGGAGGGGGCG...........................................................................................................................................................2011.001.00------------------------------------------------------------------------1.00-----------------------------------------------------------
.......................................................................GGGGCCTGGGCCGCGGCG.................................................................................................................................................................181.000.00-----------------------------------------------------------------------------------1.00------------------------------------------------
........................................................GTCGGGGCCGGAGCCGGGGC..............................................................................................................................................................................2011.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGGAGGGGGCGGGCT.......................................................................................................................................................161.000.00-------------------------------------------------------------1.00----------------------------------------------------------------------
.....GGCGGAGGAGGAGGACAA...................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------1.00---------------------------------------------------
................................GTTTCGATCGGGCCCCAGGTGCTGGTCGG.............................................................................................................................................................................................2911.001.00------------------------------------------------------------------------------------------------------1.00-----------------------------
............................................................................................GCGGGCCTGAGGGCGGCTGT..........................................................................................................................................201.000.00------------------------------------------------------------------------------------------------1.00-----------------------------------
..............................................................................................GGGCCTGAGGGCGGCGGTTTC.......................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------1.00------------------------------------
...............................GGTTTCGATCGGGCCCCAGGTGCTG..................................................................................................................................................................................................2511.001.00----------------------------------------------------1.00-------------------------------------------------------------------------------
.......................................................................................AGGGGGCGGGCCTGAGGGCGGCGGTA.........................................................................................................................................261.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------
..............................CGGTTTCGATCGGGCCCCAGG.......................................................................................................................................................................................................2111.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
............GAGGAGGAGCATGTCGGACGGTTTCGAT..................................................................................................................................................................................................................2811.001.00------------------------------------------------------------------------------------------1.00-----------------------------------------
......................ATGTCGGACGGTTTCGATCGGGC.............................................................................................................................................................................................................2311.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------
........................................CGGGCCCCAGGTGCTGGT................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------------------------------1.00----------------------
...................................................................................GCGGAGGGGGCGGGCCGGT....................................................................................................................................................191.000.00--------------------------------1.00---------------------------------------------------------------------------------------------------
.....................................................CTGGTCGGGGCCGGA......................................................................................................................................................................................1511.001.00----------------------------1.00-------------------------------------------------------------------------------------------------------
.......CGGAGGAGGAGGAGCATT.................................................................................................................................................................................................................................181.000.00----------------1.00-------------------------------------------------------------------------------------------------------------------
.........GAGGAGGAGGAGCATTTTT..............................................................................................................................................................................................................................191.000.00----------------1.00-------------------------------------------------------------------------------------------------------------------
..........AGGAGGAGGAGCATGTCGGACGGGTTC.....................................................................................................................................................................................................................271.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------
......................................................TGGTCGGGGCCGGAGC....................................................................................................................................................................................1611.001.00---------1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................CTGGTCGGGGCCGGAGCCGG.................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------1.00----------------------------------------------------------
.........GAGGAGGAGGAGCATGTC...............................................................................................................................................................................................................................1811.001.00----------------------------------1.00-------------------------------------------------------------------------------------------------
................................................................CGGAGCCGGGGCCTGGGCCG......................................................................................................................................................................2011.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
.AGGAGGCGGAGGAGGTCG.......................................................................................................................................................................................................................................181.000.00---------------1.00--------------------------------------------------------------------------------------------------------------------
.................................................GGTGCTGGTCGGGGCCGGAGCC...................................................................................................................................................................................2211.001.00------------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................AGGGCGGCGGTTTCCCGAACGGAGCGGGGCCGC....................................................................................................................331.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTGCTGAGCGGGCGCGGCAC...................................................................................................2020.500.50------------------------------------------------0.50-----------------------------------------------------------------------------------
...........................................................................................................................AGCGGGGCCTGCTGAGCG.............................................................................................................1820.500.50--------------------------------------------------0.50---------------------------------------------------------------------------------
...........................................................................................GGCGGGCCTGAGGGCGGC.............................................................................................................................................1820.500.50-------------------------------------0.50----------------------------------------------------------------------------------------------
......................................................................................................................................................CCAGCCGCCGCAACCCAAAGCCCCGGGC........................................................................2820.500.50------------------------------------------------------------------------------------------------------------------------0.50-----------
........................................................GTCGGGGCCGGAGCCGGG................................................................................................................................................................................1820.500.50-----------------------------------------------------------------------------------------------------------------------0.50------------
...........................................................................................................................................................................CCCGGGCTTCCTGCAGCC.............................................................1820.500.50---------------------------------------------------------------------------------------------------------------------0.50--------------
........................................................................................................................................................................................................GCCAGCCCAGGACGACCCCGCC............................2220.500.50-------------------------------------------------------------------------------------------------------------------------0.50----------
..............................................................................................................................................................................GGGCTTCCTGCAGCCACCG.........................................................1920.500.500.50-----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CGCCGCCAGGGGCCCAGTGCG...........2120.500.50-------------------------------------------------------------------------------------------------------------------0.50----------------
.......................................................................................................................................................................AAGCCCCGGGCTTCCTGCAGCCACCG.........................................................2620.500.50--0.50---------------------------------------------------------------------------------------------------------------------------------
.................................................GGTGCTGGTCGGGGCC.........................................................................................................................................................................................1620.500.50-----------------------------------------------0.50------------------------------------------------------------------------------------
...GAGGCGGAGGAGGAGGAGC....................................................................................................................................................................................................................................1920.500.50-------------------------0.50----------------------------------------------------------------------------------------------------------
.................................................................................................................................GCCTGCTGAGCGGGCGCGG......................................................................................................1920.500.500.50-----------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CGGAGCGGGGCCTGCTGAGCGGGC..........................................................................................................2420.500.50--------------------------------------------------------------------------------------------------------------------0.50---------------
....................................................................................................................................................................CCAAAGCCCCGGGCTTCCTGCA................................................................2220.500.50----------------------------------------------------------------------------------------------------------------------0.50-------------
...........................................................................................................................AGCGGGGCCTGCTGAGC..............................................................................................................1720.500.50-------------------------0.50----------------------------------------------------------------------------------------------------------
......................................................................................................................AACGGAGCGGGGCCTGCTGAGCGG............................................................................................................2420.500.50--------------------------0.50---------------------------------------------------------------------------------------------------------
......................................................................................................................................CTGAGCGGGCGCGGCACCAGCC..............................................................................................2220.500.50---------------------------------------------------------------------------------------------------------------------------0.50--------
..................................................................................................................CCCGAACGGAGCGGGGCCTGCTGA................................................................................................................2420.500.50-------------------------------------------------0.50----------------------------------------------------------------------------------
.....................................................................................................................................................................................................TGCGCCAGCCCAGGACGAC..................................1920.500.50---------------------------0.50--------------------------------------------------------------------------------------------------------
..................................................................................................................CCCGAACGGAGCGGGGCCTGCT..................................................................................................................2220.500.50--------------0.50---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................CGGGGCCTGCTGAGCGGG...........................................................................................................1820.500.50--------------------------------------------------------------------------------------------------------------------------0.50---------
..................................................................................................................................................................ACCCAAAGCCCCGGGCTTCCTGCAGCCACCG.........................................................3120.500.50--0.50---------------------------------------------------------------------------------------------------------------------------------
.......................................................................................AGGGGGCGGGCCTGA....................................................................................................................................................1570.430.43----------------------------0.14----------------------0.14-------------------------------------------------------------------------------0.14
.........................................................................................................................................................................GCCCCGGGCTTCCTGCAG...............................................................1830.330.33---0.33--------------------------------------------------------------------------------------------------------------------------------
....AGGCGGAGGAGGAGGAGC....................................................................................................................................................................................................................................1830.330.33-----------------------------------------------------------------------------------------------------------------------------0.33------
......................................................................................................................................................................................................................ACCCCGCCGCCAGGG.....................1540.250.25------------------------------------------------------------------------------------------------------------------------------0.25-----
......................................................................................................................................................................................................................ACCCCGCCGCCAGGGAG...................1740.250.25--------------------------------------------------------------------------------------------------------------------------------0.25---
..........................................................CGGGGCCGGAGCCGGGG...............................................................................................................................................................................1750.200.20---------------------------------------------------------------------------------------------------------------------------------0.20--
..................................................GTGCTGGTCGGGGCC.........................................................................................................................................................................................1550.200.20----------------------------------------------------------------------------------------------------------------------------------0.20-
...........................................................GGGGCCGGAGCCGGGGCC.............................................................................................................................................................................1850.200.20----------0.20-------------------------------------------------------------------------------------------------------------------------

Antisense strand
GAGGAGGCGGAGGAGGAGGAGCATGTCGGACGGTTTCGATCGGGCCCCAGGTGCTGGTCGGGGCCGGAGCCGGGGCCTGGGCCGCGGAGGGGGCGGGCCTGAGGGCGGCGGTTTCCCGAACGGAGCGGGGCCTGCTGAGCGGGCGCGGCACCAGCCGCCGCAACCCAAAGCCCCGGGCTTCCTGCAGCCACCGCCGCTGCGCCAGCCCAGGACGACCCCGCCGCCAGGGGCCCAGTGCGAGGTCCCCGCC
...................................................(((((.(((((.(((...(((.(((....))).)))......))).)))))...)))))............................................................................................................................................
..................................................51.............................................................114......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
TAX577739(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577579(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR040034(GSM532919)
G001N. (cervix)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM532888(GSM532888)
G761T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532929(GSM532929)
G702N. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040036(GSM532921)
G243N. (cervix)
SRR040023(GSM532908)
G575T. (cervix)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359191(GSM359191)
HepG2_3pM_5. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038853(GSM458536)
MELB. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
TAX577589(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................CGCTCCGTTCGGGAAACCGC........................................................................................................................... 2012.002.00----2.00-------------------------------------------------------------------------------------------------------------------------------
.....................ATCGAAACCGTCCGACATG.................................................................................................................................................................................................................. 1912.002.00------1.00---------------------------------------------------------------------------------1.00-------------------------------------------
.............................................................................................................................................................................................................................CGCCAGGGGCCCAGTTGCA.......... 191.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................CGGGGTCGTCCTGGGCTGGCG.............................. 2121.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------
.....................GATCGAAACCGTCCGACATG................................................................................................................................................................................................................. 2011.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------
...............................................................CCCAGGCCCCGGCTCCGG......................................................................................................................................................................... 1821.001.00-------------------------------------------------------------------------------------1.00----------------------------------------------
.........................CCCGATCGAAACCGTCCGA.............................................................................................................................................................................................................. 1911.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
......................GATCGAAACCGTCCGACAT................................................................................................................................................................................................................. 1911.001.00---------------------------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................GGAGGGGGCGGGCCTGACG.................................................................................................................................................. 191.000.00----------------------------------------------------------1.00-------------------------------------------------------------------------
.................................TTTCGATCGGGCCCCAGGG...................................................................................................................................................................................................... 191.000.00-------------------------------------------------------------------------------1.00----------------------------------------------------
......................................................................................................................AACGGAGCGGGGCCTG.................................................................................................................... 161.000.00-----------------------------------------------------------1.00------------------------------------------------------------------------
........................................................................................................................................................................................................TCGTCCTGGGCTGGC................................... 1540.500.50-----0.25-------------------------------------------------------------------------------------------------------------------------0.25----
...........................................................................................................................................................CCCGGGGCTTTGGGTTGCGGCG......................................................................... 2220.500.50--------------0.50---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................GTGGCTGCAGGAAGCCCGGGGCTTT........................................................... 2520.500.50----------------------------------------------------------------------------------------------------------------------------0.50-------
........................................................................................................................................................................TGGCTGCAGGAAGCCCGGGGCT............................................................ 2220.500.50-------------------------0.50----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CGGGGCTTTGGGTTGCGG........................................................................... 1820.500.50-------------------------------------0.50----------------------------------------------------------------------------------------------