ID: uc003jja.2_intron_8_0_chr5_34925081_f
GENE: (9)
chr5:34925031-34925380+


(1)
AGO2.ip
(3)
B-CELL
(1)
BRAIN
(2)
BREAST
(11)
CELL-LINE
(1)
CERVIX
(2)
HEART
(2)
HELA
(2)
LIVER
(5)
OTHER
(3)
SKIN
(1)
XRN.ip

Sense strand
TTGGAGGACCAACTTTATATGAAAATCCTCACTACCAGTCACCAAACATGGTAAGCGGTTGTGTCATTCAGTAGTCTTCAATGTACCAGAACCCTTTGGCCAAAATGATTCTGTGAAGTAATTGCTGTTTTATTACCTGTGAAACTGAATTTGGTTTTTGCTGCATAGAAACTTGGAAATTACTCCCTTTTTTCATGACACTGGCTGAAAGGATATATGGTTCATAACTGAAAGTCTTTGCCTTATATAAAATGTTTATTTTTATTTCAAAAGCATCTAATCTTTTTTTTTTTTTTTTAGCATCGGCGTGTCATAAGATCCATCACAGCTGCAAAATACAGAGAGAAACA
.............................................................................................................((((((.(((((..((((((((((.....))))))).......)))..))))).))))))...((((((.......((((((.(((......)))..))))))(((((.(((.....((.....))....))).)))))................))))))................................................................................
.............................................................................................................110...........................................................................................................................................................................................300................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR343335DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR040018(GSM532903)
G701N. (cervix)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359174(GSM359174)
hela_5_1. (hela)
SRR189787SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTAG..................................................241354.00354.0094.00104.00100.0053.003.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTAAG..................................................2434.000.009.0013.009.003.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTAT...................................................2323.000.007.006.008.002.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTCTAG................................................2623.000.008.00--13.002.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTCTAG..................................................2418.000.0010.00--6.002.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTCTAG.................................................2510.000.002.00--7.001.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTCTAG....................................................228.000.005.00--2.001.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTCAG....................................................228.000.003.00-1.004.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTCTAG.....................................................217.000.006.00--1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTAGG.................................................2515.00354.001.002.001.00-1.00---------------------------
.............................................................................................................................................................................................................................................................................................................................ATCCATCACAGCTGCAAAATACAG.........2414.004.00------2.00---2.00---------------------
.....................AAAATCCTCACTACCAGTCACCAA.................................................................................................................................................................................................................................................................................................................2413.003.00------3.00-------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTAAAAG...............................................263.000.00-1.002.00-----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTCTAT....................................................223.000.002.00--1.00----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTAAGG...................................................223.000.00-1.00-2.00----------------------------
.....................AAAATCCTCACTACCAGTCACC...................................................................................................................................................................................................................................................................................................................2213.003.00------1.002.00------------------------
......................................................................................................................................................................................................................................................................................AATCTTTTTTTTTTTTTTTTATTTG...............................................253.000.00--3.00-----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTCCAG....................................................222.000.001.00---1.00---------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTAG......................................................232.000.001.001.00------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTCCAG.................................................252.000.00-1.00-1.00----------------------------
..................................................................................................................................................................................................................................................................................ATCTAATCTTTTTTTTTTTG........................................................202.000.00-1.00-1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTATT..................................................242.000.001.00-1.00-----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTACTG................................................252.000.00-1.00-1.00----------------------------
.............................................................................................................................................................................................................................................................................................................................ATCCATCACAGCTGCAAAACACA..........232.000.00-------2.00------------------------
...................................................................................................................................................................................................................................................................................................................................CACAGCTGCAAAATACAG.........1812.002.00----------1.00------1.00--------------
.....................AAAATCCTCACTACCAGTCACCAAACATGCAT.........................................................................................................................................................................................................................................................................................................322.000.00------2.00-------------------------
......................................................................................................................................................................................................................................................................................AATCTTTTTTTTTTTTTTTTATACG...............................................252.000.00-2.00------------------------------
.............................................................................................................................................................................................................................................................................................................ATCGGCGTGTCATAAGATA..............................192.000.00-------------2.00------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTCCAA.................................................251.000.00---1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTCTC.................................................251.000.001.00-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTCC....................................................221.000.001.00-------------------------------
................................................................................................................................................................................................................................................................................................................GGCGTGTCATAAGATCCA............................1811.001.00-------------------------1.00------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTATTT.................................................251.000.00---1.00----------------------------
............................................................................................................................................................................................................................................................................................................CATCGGCGTGTCATAAGATCCATCACAG......................2811.001.00-------1.00------------------------
................................................................................................................................................................................................................................................................................................TTTTTTTTTTAGCATCCCAG..........................................201.000.00----1.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTATAG.......................................................191.000.001.00-------------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTTTTTAG..................................................2711.001.00--1.00-----------------------------
............................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTAGCATCGC............................................221.000.00-----1.00--------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTGGTG.................................................251.000.00--1.00-----------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTA.......................................................221.000.00---1.00----------------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTAGCCGGG.............................................261.000.00-----1.00--------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTATTTG...............................................261.000.001.00-------------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTATAG....................................................211.000.00-1.00------------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTG.........................................................201.000.00-1.00------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTCTAA.....................................................211.000.00---1.00----------------------------
...........................................................................................................................................................................................................................................................................................................GCATCGGCGTGTCATAAG.................................1811.001.00-------------------1.00------------
......................................................................................................................................................................................................................................................................................................................TCATAAGATCCATCACAG......................1811.001.00----------------------------1.00---
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTCAAG................................................261.000.00---1.00----------------------------
......................................................................................................................................................................................................................................................................................AATCTTTTTTTTTTTTTTTTACGGT...............................................251.000.00-----1.00--------------------------
.......................................................................................................................................................................................................................................................................................................................CATAAGATCCATCACAGCTGCAAAATACAGA........3111.001.00--------------------1.00-----------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTCTAT...................................................231.000.001.00-------------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTCTCG................................................251.000.00-----1.00--------------------------
...................................................................................................................................................................................................................................................................................TCTAATCTTTTTTTTTTTTTAAAG...................................................241.000.00--1.00-----------------------------
..................................................................................................................................................................................................................................................................................ATCTAATCTTTTTTTTTTTTTTTTATTCC...............................................291.000.00----1.00---------------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTAGCAGCCT............................................271.000.00-----1.00--------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTCAT.....................................................211.000.001.00-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTCG.....................................................211.000.001.00-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTACG..................................................241.000.001.00-------------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTTTTTAT..................................................271.000.001.00-------------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTCTAG.................................................241.000.00---1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTCGAG.................................................251.000.001.00-------------------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTAGCAGTTC............................................271.000.00--------1.00-----------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTCCG.................................................251.000.00---1.00----------------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTAGCGGG..............................................251.000.00-----1.00--------------------------
........................................................................................................................................................................................................................................................................................TCTTTTTTTTTTTTTTTTAGCAGTTC............................................261.000.00-----1.00--------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTTAG.....................................................241.000.00---1.00----------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTAG..........................................................191.000.00-1.00------------------------------
........................................................................................................................................................................................................CTGGCTGAAAGGATATATGGTTCATAA...........................................................................................................................2711.001.00---------1.00----------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTAGCATTTTG...........................................281.000.00-----1.00--------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTAG.........................................................201.000.00--1.00-----------------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTAGGCTT..............................................251.000.00-----1.00--------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTTTTAG...................................................261.000.00---1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTCCG....................................................221.000.001.00-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTGACG..................................................241.000.00--1.00-----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTAAATG...............................................261.000.00----1.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTCTAA.................................................251.000.00---1.00----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTCTAG..................................................231.000.001.00-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTCGAG...................................................231.000.00---1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTAGG....................................................221.000.00-1.00------------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTACT.................................................241.000.00-1.00------------------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTAGTAG...............................................241.000.00--------1.00-----------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTTTAG....................................................251.000.00-1.00------------------------------
...................................................................................................................................................................................................................................................................................TCTAATCTTTTTTTTTCTAA.......................................................201.000.00----1.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTCAT.................................................251.000.001.00-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTAAAG....................................................221.000.00----1.00---------------------------
..................................................................................................................................................................................................................................................................................ATCTAATCTTTTTTTTTTTTCG......................................................221.000.001.00-------------------------------
.......................AATCCTCACTACCAGTCACCAAACATG............................................................................................................................................................................................................................................................................................................2711.001.00--------------1.00-----------------
......................................................................................................................................................................................................................................................................................AATCTTTTTTTTTTTTTTTTAGTAG...............................................251.000.00--------1.00-----------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTTTCTAG..................................................271.000.00---1.00----------------------------
........................................................................................................................................................................................................................................................................................TCTTTTTTTTTTTTTTTTAGCAGCTG............................................261.000.00-----1.00--------------------------
..................................................................................................................................................................................................................................................................................ATCTAATCTTTTTTTTTTTTTCTTG...................................................251.000.00-1.00------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTAGTAG...............................................2711.00354.00----1.00---------------------------
.........................................................................................................................................................................................................................................................................................................................TAAGATCCATCACAGCTGT..................191.000.00---------1.00----------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTAGTG................................................2611.00354.00-1.00------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTCTAT................................................261.000.001.00-------------------------------
..................................................................................................................GAAGTAATTGCTGTTTTGG.........................................................................................................................................................................................................................191.000.00------1.00-------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTATAT...................................................231.000.00-1.00------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTAAGG....................................................221.000.001.00-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTCCAG................................................261.000.00---1.00----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTATT.................................................241.000.00-1.00------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTCTT..................................................241.000.001.00-------------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTATG.....................................................201.000.00---1.00----------------------------
......................................................................................................................................................................................................................................................................................AATCTTTTTTTTTTTTTTTTATTG................................................241.000.00--1.00-----------------------------
...................................................................................................................................................................................TTACTCCCTTTTTTCATTTC.......................................................................................................................................................201.000.00----1.00---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTCTAC................................................261.000.00----1.00---------------------------
.....................AAAATCCTCACTACCAGTCACCAAACAT.............................................................................................................................................................................................................................................................................................................2811.001.00------1.00-------------------------
..................................................GTAAGCGGTTGTGTCATTCAGTAG....................................................................................................................................................................................................................................................................................2411.001.00---------1.00----------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTACTTA...............................................261.000.00-1.00------------------------------
........................................................................................................................................................................................................................................................................................TCTTTTTTTTTTTTTTTTAGCAGCTT............................................261.000.00-----1.00--------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTTTAAG...................................................261.000.00--1.00-----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTATTG................................................251.000.00--1.00-----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTCTTA................................................251.000.00--1.00-----------------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTAGCAGTCT............................................271.000.00-----1.00--------------------------
........................................................................................................................................................................................................................................................................................TCTTTTTTTTTTTTTTTTAGCGG...............................................231.000.00--------1.00-----------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTCAA...................................................231.000.00---1.00----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTACTG....................................................211.000.00---1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTCC...................................................231.000.00---1.00----------------------------
..................ATGAAAATCCTCACTACCAGTCACCA..................................................................................................................................................................................................................................................................................................................2611.001.00---------------------1.00----------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTAAA....................................................221.000.00---1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTAGG.....................................................211.000.00--1.00-----------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTCTAG.........................................................201.000.00---1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTACTT.................................................251.000.00---1.00----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTATTA....................................................221.000.00---1.00----------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTTTTTAT....................................................251.000.00---1.00----------------------------
........................................................................................................................................................................................................................................................................................TCTTTTTTTTTTTTTTTTAGCAGGTT............................................261.000.00-----1.00--------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTAGG..................................................241.000.001.00-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTCCAG..................................................241.000.00---1.00----------------------------
.................................................................................................................................................................................................................................................................................CATCTAATCTTTTTTTTTTAG........................................................211.000.00-1.00------------------------------
...................................................................................................................................................................................................................................................................................TCTAATCTTTTTTTTTTTTTTTTAAAAG...............................................281.000.001.00-------------------------------
......................................................................................................................................................................................................................................................................................AATCTTTTTTTTTTTTTTTTACTTT...............................................251.000.00-----1.00--------------------------
.......................................................................................................................................................................................................................................................................................ATCTTTTTTTTTTTTTTTTATCAA...............................................241.000.00--1.00-----------------------------
..............................................................................................................................................................................................................................................................................................TTTTTTTTTTTTAGCATCCAGC..........................................221.000.00-----1.00--------------------------
..........AACTTTATATGAAAATCCTCACTACC..........................................................................................................................................................................................................................................................................................................................2611.001.00----------------1.00---------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTA...................................................2371.001.000.140.570.140.14----------------------------
.....................................................................................................................................................................................................................................................................................TAATCTTTTTTTTTTTTTTTTAG..................................................2380.880.880.38-0.380.12----------------------------
......................................................................................................................................................................................................CACTGGCTGAAAGGAT........................................................................................................................................1620.500.50------------------------------0.50-
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTAAAG................................................2670.291.000.140.14------------------------------
............................................................................................................................................................................................................................................................................................................................................AAAATACAGAGAGAAACA1850.200.20-------------------------------0.20
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTAAA.................................................2570.141.00--0.14-----------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTATTGG...............................................2770.141.00----0.14---------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTAAGG................................................2670.141.000.14-------------------------------
....................................................................................................................................................................................................................................................................................CTAATCTTTTTTTTTTTTTTTTACAG................................................2670.141.00---0.14----------------------------

Antisense strand
TTGGAGGACCAACTTTATATGAAAATCCTCACTACCAGTCACCAAACATGGTAAGCGGTTGTGTCATTCAGTAGTCTTCAATGTACCAGAACCCTTTGGCCAAAATGATTCTGTGAAGTAATTGCTGTTTTATTACCTGTGAAACTGAATTTGGTTTTTGCTGCATAGAAACTTGGAAATTACTCCCTTTTTTCATGACACTGGCTGAAAGGATATATGGTTCATAACTGAAAGTCTTTGCCTTATATAAAATGTTTATTTTTATTTCAAAAGCATCTAATCTTTTTTTTTTTTTTTTAGCATCGGCGTGTCATAAGATCCATCACAGCTGCAAAATACAGAGAGAAACA
.............................................................................................................((((((.(((((..((((((((((.....))))))).......)))..))))).))))))...((((((.......((((((.(((......)))..))))))(((((.(((.....((.....))....))).)))))................))))))................................................................................
.............................................................................................................110...........................................................................................................................................................................................300................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR343335DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR040018(GSM532903)
G701N. (cervix)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359174(GSM359174)
hela_5_1. (hela)
SRR189787SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
............................................................AAGACTACTGAATGACAC................................................................................................................................................................................................................................................................................ 1812.002.00-----------2.00--------------------
..................................................................................................................GAAGTAATTGCTGTTTTATTG....................................................................................................................................................................................................................... 211.000.00-------1.00------------------------
.......................................................................AGGGTTCTGGTACATTGAAGACTA............................................................................................................................................................................................................................................................... 2411.001.00-----------------------------1.00--
........................................................................................................................................................TCTATGCAGCAAAAACC..................................................................................................................................................................................... 1711.001.00-----------------------1.00--------
..................................................................................................................GAAGTAATTGCTGTTTTTC......................................................................................................................................................................................................................... 191.000.00-------1.00------------------------
.....................AAAATCCTCACTACCAAAA...................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------1.00-----
....................................................................................................................AGTAATTGCTGTTTTAATTG...................................................................................................................................................................................................................... 201.000.00------1.00-------------------------
.......................................................................................................................................................................................................................................................................AGATTAGATGCTTTTGAAAT................................................................... 2011.001.00--------------1.00-----------------
..........................CCTCACTACCAGTCACGTT................................................................................................................................................................................................................................................................................................................. 191.000.00------------------1.00-------------
..................................................................................................................GAAGTAATTGCTGTTTTGGCA....................................................................................................................................................................................................................... 211.000.00----------------------1.00---------
....................................................................................................................AGTAATTGCTGTTTTAATT....................................................................................................................................................................................................................... 191.000.00---------------------------1.00----
.............TTTATATGAAAATCCAAA............................................................................................................................................................................................................................................................................................................................... 181.000.00---------------1.00----------------
................ATATGAAAATCCTCATGTA........................................................................................................................................................................................................................................................................................................................... 191.000.00------------------------1.00-------
..................................................................................................................................................................................................................................................AATAAACATTTTATATAA.......................................................................................... 1850.200.20----0.20---------------------------