ID: uc003jia.1_intron_3_0_chr5_33549489_r.5p
GENE: ADAMTS12(20)
chr5:33560932-33561181-


(1)
AGO2.ip 		(4)
B-CELL 		(2)
BREAST 		(11)
CELL-LINE 		(2)
CERVIX 		(7)
HEART 		(5)
LIVER 		(6)
OTHER 		(1)
RRP40.ip 		(14)
SKIN 		(1)
TESTES

Sense strand
GATGCCACCTCCGTCCCTGTGCTGGCTGGAAAGTGGGAAACTGGAGCAAGGTAACTTATCAGGCTTGGCAGAGTCTTGGAGGTAGAGAAGGTGGGGATGGGTTGGAAAGGGAATCTTATATAAACACTTGCTAAAGTCGTTTTTTTTTTTTTTCTTTTTCTTAATTAAAGTTCTAGGGTACATGTGCACAACGTTCAGGTTTGTTACATATGTATACATGTGTCATGTTGGTGTGCTGCACCCATTAACT
................................................................((.((....((((.......))))..)).))....((((((((((((((........((((((((....)))).)))).........)))))))))).))))....................................................................................
................................................................65....................................................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR343334SRR189784SRR189782SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532929(GSM532929)
G702N. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343335GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189785SRR553576(SRX182782)
source: Testis. (testes)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................AGAGTCTTGGAGGTAGAGCAC................................................................................................................................................................216.000.00-----------5.001.00---------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTCACT....................................................................................275.000.00-----1.002.00-2.00-------------------------------------------
.....................................................................AGAGTCTTGGAGGTAGAGCACT...............................................................................................................................................................224.000.00------------2.001.00-------------------------1.00------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCGGT.......................................................................................244.000.001.003.00--------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCGGAG......................................................................................243.000.002.001.00--------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAAACAG..................................................................................283.000.00--3.00-------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTGG.........................................................................................253.000.003.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCGGAG......................................................................................253.000.003.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCCGG.......................................................................................243.000.003.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCGGTG......................................................................................223.000.001.002.00--------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCGGGG......................................................................................252.000.002.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTCCCC....................................................................................242.000.002.00---------------------------------------------------
.......................................................................................................................................................................AAGTTCTAGGGTACATGTGCACAACGCAGG.....................................................302.000.00-2.00--------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCGGAG......................................................................................232.000.001.001.00--------------------------------------------------
.......................................................................AGTCTTGGAGGTAGAGCACT...............................................................................................................................................................202.000.00-------------1.00----------------------------------1.00---
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTATCT....................................................................................242.000.002.00---------------------------------------------------
..............................................................................................................................................................................AGGGTACATGTGCACAACGCGA......................................................222.000.00-2.00--------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCACT....................................................................................252.000.00------2.00---------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAAATG...................................................................................272.000.00--1.00--1.00----------------------------------------------
..................................................................................................................................................TTTTTTTCTTTTTCTTAATTCT..................................................................................222.000.00----2.00-----------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCGCAG......................................................................................242.000.001.001.00--------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTAACAG...................................................................................262.000.00--2.00-------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTGTTG....................................................................................262.000.002.00---------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTCAG.....................................................................................252.000.00--1.00--1.00----------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTGTTG....................................................................................242.000.001.001.00--------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTAAACAG..................................................................................272.000.00--2.00-------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCGGC.......................................................................................232.000.002.00---------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCGCAG......................................................................................232.000.002.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTCCC.....................................................................................261.000.001.00---------------------------------------------------
......................................................................................................................................AGTCGTTTTTTTTTTTTTTCTTGAG...........................................................................................251.000.00-1.00--------------------------------------------------
...............................................................................................................................................TTTTTTTTTTCTTTTTCTTGGTT....................................................................................231.000.001.00---------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCCGG....................................................................................251.000.001.00---------------------------------------------------
......................................................................................................................................AGTCGTTTTTTTTTTTGGAG................................................................................................201.000.001.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTAAACAG..................................................................................261.000.00--1.00-------------------------------------------------
...............................................................................................................................................................................................................................CATGTTGGTGTGCTGCACAC.......201.000.00--------------------------------------1.00-------------
.....................................................................AGAGTCTTGGAGGTAGAGC..................................................................................................................................................................191.000.00------------------------------------1.00---------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCGGT.......................................................................................231.000.00-1.00--------------------------------------------------
...............................................................................................................................................TTTTTTTTTTCTTTTTCTTGGTG....................................................................................231.000.001.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCGGTG......................................................................................251.000.00-1.00--------------------------------------------------
.....................................................................................................................................AAGTCGTTTTTTTTTTTTTTCTTTTT...........................................................................................2611.001.00-1.00--------------------------------------------------
...............................................................................AGGTAGAGAAGGTGGCG..........................................................................................................................................................171.000.00-1.00--------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTCAAG....................................................................................241.000.00----1.00-----------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCAAG....................................................................................251.000.00--1.00-------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTAATTCTG.................................................................................281.000.00----1.00-----------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCGCC....................................................................................251.000.001.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTAGGT....................................................................................241.000.001.00---------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTACAG....................................................................................251.000.00--1.00-------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTGGCT....................................................................................271.000.001.00---------------------------------------------------
...............................................................................................................................................TTTTTTTTTTCTTTTTCTTGAC.....................................................................................221.000.00-1.00--------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTAATG........................................................................................261.000.00------1.00---------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTCATG.....................................................................................261.000.00--1.00-------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAATTTTG.................................................................................291.000.00--1.00-------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTCCG.....................................................................................251.000.00--1.00-------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTGGTC....................................................................................271.000.001.00---------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCCAG....................................................................................251.000.00--1.00-------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAATAG...................................................................................271.000.00--1.00-------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTATTG.............................................................................................211.000.00--------1.00-------------------------------------------
................................GTGGGAAACTGGAGCAAG........................................................................................................................................................................................................1811.001.00---------------------------------1.00------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCGC........................................................................................201.000.001.00---------------------------------------------------
................................................................................................................................................TTTTTTTTTCTTTTTCTTAAATTG..................................................................................241.000.00----1.00-----------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAATTATG.................................................................................291.000.00--1.00-------------------------------------------------
......................................................................................................................................AGTCGTTTTTTTTTTTTTAACT..............................................................................................221.000.001.00---------------------------------------------------
.................................................................................................................................................TTTTTTTTCTTTTTCTTAATTACTC................................................................................251.000.00-----1.00----------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTCC..........................................................................................241.000.001.00---------------------------------------------------
................................................................................................................................................TTTTTTTTTCTTTTTCTTGGTA....................................................................................221.000.001.00---------------------------------------------------
...................................................TAACTTATCAGGCTTATT.....................................................................................................................................................................................181.000.00----------------------------------------1.00-----------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCGGTC......................................................................................231.000.001.00---------------------------------------------------
.................................................................................................................................................TTTTTTTTCTTTTTCTTAATTATTG................................................................................251.000.00----1.00-----------------------------------------------
.........................................................................................................................................CGTTTTTTTTTTTTTTCAGAA............................................................................................211.000.001.00---------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTCGC......................................................................................241.000.001.00---------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTACAT.......................................................................................271.000.00-----1.00----------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTGGTG....................................................................................251.000.001.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTGGGG....................................................................................241.000.001.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTGTCC....................................................................................241.000.00-1.00--------------------------------------------------
.................................................................................................................................................TTTTTTTTCTTTTTCTTAATTCT..................................................................................231.000.001.00---------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAGG.....................................................................................251.000.001.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTATTAG...................................................................................281.000.00-----1.00----------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCCCC.......................................................................................241.000.001.00---------------------------------------------------
.................................TGGGAAACTGGAGCAAG........................................................................................................................................................................................................1711.001.00------------------------------------------1.00---------
........................................................................................................................................TCGTTTTTTTTTTTTTTCATTA............................................................................................221.000.00--------1.00-------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTGAA..........................................................................................241.000.00-1.00--------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCGGCC......................................................................................241.000.001.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTCTG.....................................................................................261.000.001.00---------------------------------------------------
....................................................................................GAGAAGGTGGGGATGGTTGC..................................................................................................................................................201.000.00-------------------------1.00--------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTGGCG....................................................................................271.000.001.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTGCCC....................................................................................241.000.001.00---------------------------------------------------
.........................................................................................................................................CGTTTTTTTTTTTTTTCATT.............................................................................................201.000.00-1.00--------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCTTG....................................................................................251.000.00--1.00-------------------------------------------------
.........................................................................................................................................CGTTTTTTTTTTTTTTCTTTTA...........................................................................................221.000.00--------1.00-------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTCACT....................................................................................261.000.00------1.00---------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTCGTT...............................................................................................191.000.00------1.00---------------------------------------------
..........................................................................................................................................GTTTTTTTTTTTTTTCTTTTGGTT........................................................................................241.000.00-1.00--------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTCAAC....................................................................................271.000.001.00---------------------------------------------------
........................................................................................................................................................................AGTTCTAGGGTACATGTGCACAACGCAGG.....................................................291.000.00-1.00--------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTCAG.....................................................................................261.000.00--1.00-------------------------------------------------
......................................................................................................................................AGTCGTTTTTTTTTTTTTTCTTTTTT..........................................................................................261.000.00-1.00--------------------------------------------------
...........................................................................TTGGAGGTAGAGAAGGTAT............................................................................................................................................................191.000.00--------------------------------1.00-------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTGTG.....................................................................................261.000.00-1.00--------------------------------------------------
...................................................TAACTTATCAGGCTTAT......................................................................................................................................................................................171.000.00-------------1.00--------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTAATTAACATG..............................................................................301.000.00--1.00-------------------------------------------------
................................................................................................................................................TTTTTTTTTCTTTTTCTTGCCG....................................................................................221.000.00-1.00--------------------------------------------------
.........................................................................................................................................CGTTTTTTTTTTTTTTCTTTCT...........................................................................................221.000.001.00---------------------------------------------------
................................................................................................................................................TTTTTTTTTCTTTTTCTTAACAG...................................................................................231.000.00----1.00-----------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTCCC.....................................................................................251.000.00-1.00--------------------------------------------------
...............................................................................................................................................TTTTTTTTTTCTTTTTCTTATTG....................................................................................231.000.00-----1.00----------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTCTTTTCC....................................................................................301.000.001.00---------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTATTC.......................................................................................271.000.001.00---------------------------------------------------
.......................................................................AGTCTTGGAGGTAGAGTACT...............................................................................................................................................................201.000.00--------------------1.00-------------------------------
....................................................................................................................................................TTTTTCTTTTTCTTAACCAG..................................................................................201.000.001.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCCCCG......................................................................................251.000.001.00---------------------------------------------------
......................................................................................................................................AGTCGTTTTTTTTTTTTTCTTC..............................................................................................221.000.001.00---------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCTAG....................................................................................251.000.00--1.00-------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCTGG....................................................................................251.000.00-1.00--------------------------------------------------
..........................................................................................................................................GTTTTTTTTTTTTTTCTTTTTCTGTGG.....................................................................................271.000.001.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTCAG......................................................................................251.000.00--1.00-------------------------------------------------
......................................................................................................................................AGTCGTTTTTTTTTTTTTTCTTTTTTTTT.......................................................................................291.000.001.00---------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCCAT....................................................................................251.000.00--1.00-------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTGAGG....................................................................................251.000.00-1.00--------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTGCAG....................................................................................271.000.001.00---------------------------------------------------
.......................................................................................................................................GTCGTTTTTTTTTTTCAG.................................................................................................181.000.00--1.00-------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCGGTC......................................................................................221.000.001.00---------------------------------------------------
.......................................................................................................................................GTCGTTTTTTTTTTTTGGT................................................................................................191.000.00--------1.00-------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTGGGC....................................................................................261.000.00-1.00--------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTAACTG...................................................................................251.000.00------1.00---------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTGCG............................................................................................221.000.001.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTAAGTCG..................................................................................261.000.001.00---------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCGGTC......................................................................................241.000.001.00---------------------------------------------------
......................................................................GAGTCTTGGAGGTAGAGCACT...............................................................................................................................................................2141.000.25------------0.75-------------------------------------0.25-
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTAGA........................................................................................261.000.00-1.00--------------------------------------------------
.......................................................................................................................................GTCGTTTTTTTTTTTTTTCTTTTTTAC........................................................................................271.000.00-----1.00----------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTAATTC...................................................................................251.000.00----1.00-----------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCGTGG......................................................................................241.000.001.00---------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAACCAA..................................................................................281.000.00-----1.00----------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTCAAC....................................................................................251.000.001.00---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTAATG....................................................................................271.000.00----1.00-----------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTCTGG.....................................................................................251.000.00-1.00--------------------------------------------------
.................................................................................................................................................TTTTTTTTCTTTTTCTTAATG....................................................................................211.000.00--1.00-------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCGGTT......................................................................................231.000.001.00---------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAAAAG...................................................................................271.000.00-----1.00----------------------------------------------
...........................................................................TTGGAGGTAGAGAAGGCAAT...........................................................................................................................................................201.000.00----------------------------------1.00-----------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTGGTT....................................................................................251.000.001.00---------------------------------------------------
......................................................................................................................................AGTCGTTTTTTTTTTTTTTTTGG.............................................................................................231.000.00------1.00---------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTACAG....................................................................................241.000.00--1.00-------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCGGC.......................................................................................241.000.001.00---------------------------------------------------
................................................................................................................................................TTTTTTTTTCTTTTTCTTGGTT....................................................................................221.000.001.00---------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTAGTT..............................................................................................201.000.001.00---------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTATG..............................................................................................201.000.00------1.00---------------------------------------------
.........................................................................................................................................CGTTTTTTTTTTTTTTCATTA............................................................................................211.000.00------1.00---------------------------------------------
................................................................................................................................................TTTTTTTTTCTTTTTCTTAAACTG..................................................................................241.000.00----1.00-----------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCTTAAACGG..................................................................................271.000.001.00---------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCGGTA......................................................................................221.000.00-1.00--------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTGGAG....................................................................................241.000.001.00---------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTAA..........................................................................................241.000.00--------1.00-------------------------------------------
............................................................................TGGAGGTAGAGAAGGCAAT...........................................................................................................................................................191.000.00-----------------------------------1.00----------------
..............................................................................................................................................TTTTTTTTTTTCTTTTTCTTAATTTG..................................................................................261.000.00--1.00-------------------------------------------------
.....................................................................................................................................AAGTCGTTTTTTTTTTTTTTCTTTTTTT.........................................................................................2811.001.00-1.00--------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTCTTTTTCGC........................................................................................211.000.00-1.00--------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTCTCG.....................................................................................251.000.00-1.00--------------------------------------------------
...................................................................................................................................................TTTTTTCTTTTTCTTAATTCTG.................................................................................221.000.00----1.00-----------------------------------------------
..................................................GTAACTTATCAGGCTTGGCAGAGTC...............................................................................................................................................................................2511.001.00--------------------1.00-------------------------------
....................................................................................................................................................TTTTTCTTTTTCTTAATCAG..................................................................................201.000.00----1.00-----------------------------------------------
......................................................................................................................................AGTCGTTTTTTTTTTTTTTTTGC.............................................................................................231.000.001.00---------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTAATAT...................................................................................271.000.00-----1.00----------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTAAAG....................................................................................2740.500.25----0.250.25----------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTCTAAA......................................................................................2820.500.50--0.50-------------------------------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTCT.........................................................................................2520.500.500.50---------------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTAAACAG..................................................................................2940.250.25----0.25-----------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTAACAT...................................................................................2840.250.25-----0.25----------------------------------------------
...........................................................................................................................................TTTTTTTTTTTTTTCTTTTTCTTAA......................................................................................2540.250.25-0.25--------------------------------------------------
......................................................................GAGTCTTGGAGGTAGAGCAC................................................................................................................................................................2040.250.25-------------------------------------------------0.25--
......................................................................GAGTCTTGGAGGTAGAG...................................................................................................................................................................1740.250.25-------------0.25--------------------------------------
........................................................................GTCTTGGAGGTAGAG...................................................................................................................................................................1590.110.11---------------------------------------------------0.11

Antisense strand
GATGCCACCTCCGTCCCTGTGCTGGCTGGAAAGTGGGAAACTGGAGCAAGGTAACTTATCAGGCTTGGCAGAGTCTTGGAGGTAGAGAAGGTGGGGATGGGTTGGAAAGGGAATCTTATATAAACACTTGCTAAAGTCGTTTTTTTTTTTTTTCTTTTTCTTAATTAAAGTTCTAGGGTACATGTGCACAACGTTCAGGTTTGTTACATATGTATACATGTGTCATGTTGGTGTGCTGCACCCATTAACT
................................................................((.((....((((.......))))..)).))....((((((((((((((........((((((((....)))).)))).........)))))))))).))))....................................................................................
................................................................65....................................................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR343334SRR189784SRR189782SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532929(GSM532929)
G702N. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343335GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189786SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189785SRR553576(SRX182782)
source: Testis. (testes)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................................................................................GTTCAGGTTTGTTACATCTG...................................... 2021.000.00---12.00---4.00-1.00-------1.00------------1.00-------------1.00--1.00----
........................................................................................................................................................................AGTTCTAGGGTACATGTGCACTG........................................................... 239.000.00-------3.00------1.001.00--1.001.00--1.00--------1.00--------------------
................................................................................................................................................................................................GTTCAGGTTTGTTACATATGTCTG.................................. 247.000.00-------1.00-4.00-------1.001.00---------------------------------
........................................................................................................................................................................AGTTCTAGGGTACATGTGCTG............................................................. 215.000.00---------1.00----2.00--------1.001.00---------------------------
................................................................................................................................................................................................GTTCAGGTTTGTTACATATTCTG................................... 232.000.00-------1.00-1.00------------------------------------------
................................................................................................................................................................................................GTTCAGGTTTGTTACATATCTG.................................... 222.000.00---------------------1.00----1.00-------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTGT............................................................................................. 212.000.00----------2.00-----------------------------------------
................................................................................................................................................................................................GTTCAGGTTTGTTACATTCTG..................................... 211.000.00---------------1.00------------------------------------
................................................................................................................................................................................................GTTCAGGTTTGTTACTCTG....................................... 191.000.00-------------------------------------------1.00--------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTGT......................................................................................... 251.000.00----------1.00-----------------------------------------
........................................................................................................................................................................AGTTCTAGGGTACATGTGCACCTG.......................................................... 241.000.00---1.00------------------------------------------------
.......................................................................................................................................GTCGTTTTTTTTTTTTGATA............................................................................................... 201.000.00----------------1.00-----------------------------------
.......................................................................................................................................GTCGTTTTTTTTTTTGAT................................................................................................. 181.000.00----------------------------------------------1.00-----
.......................................................................................................................................GTCGTTTTTTTTTTTTGTCG............................................................................................... 201.000.00---------------------------------------------1.00------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTGGT.......................................................................................... 241.000.00----------1.00-----------------------------------------
........................................................................................................................................................................AGTTCTAGGGTACATGTGCACAACGCTG...................................................... 281.000.00-------------------1.00--------------------------------
.......................................................................................................................................GTCGTTTTTTTTTTTTTGGAG.............................................................................................. 211.000.00----------------1.00-----------------------------------
........................................................................................................................................................................................................TTGTTACATATGTATACCTA.............................. 201.000.00-------------------------------------1.00--------------
.........................................................................................................................................CGTTTTTTTTTTTTTTCTTTTTCTTCA...................................................................................... 271.000.00---------------------------1.00------------------------
........................................................................................................................................TCGTTTTTTTTTTTTTTCTTTTTTGT........................................................................................ 261.000.00----------1.00-----------------------------------------
.....................................................................................................................................AAGTCGTTTTTTTTTTTTCAAT............................................................................................... 221.000.00-----------------------------1.00----------------------
.................................................................................................................................................................................................TTCAGGTTTGTTACATATGTATAA................................. 241.000.00----------------------------1.00-----------------------
............................................................................................................................................TTTTTTTTTTTTTCTTTTTCTTTG...................................................................................... 241.000.00----------1.00-----------------------------------------
........................................................................................................................................................................................................TTGTTACATATGTATCCAG............................... 191.000.00------------1.00---------------------------------------
.......................................................................................................................................GTCGTTTTTTTTTTTTGAT................................................................................................ 191.000.00-----------------------------------------1.00----------
........CAGCACAGGGACGGAG.................................................................................................................................................................................................................................. 1650.200.20--------------0.20-------------------------------------