ID: uc003jfb.1_intron_1_0_chr5_12595891_f.3p
GENE: TAG(2)
chr5:12711110-12711359+


(7)
CELL-LINE
(1)
CERVIX
(1)
OTHER
(1)
SKIN

Sense strand
ATAATTGTAAAAAGTGAAAAAATGTATATCAAGAACTTGGCAAAGTATGTGGTAAAAATAAACACACAATAAATAGTGACAACAGTTATTTTTGAGTGAATGTTTTAACTTCTAGTTGGAGGGTGTTTATCAATTGTATATTCTTTTTTTTTTTTTTTGCATTTTACACCTGTGTGACTTTTATTTTATTTTATTTTTAGTTCCAGGATACATGTGCAGGATGTGCAAGTTTGCTACATGGGTAAATATG
...................................................................................................................................................................(((((....))))).........................................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR189784
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTCTTG.................................................2524.000.00-8.003.0010.003.00-----
.................................................................................................................................................................................CTTTTATTTTATTTTATTTTTAG..................................................23212.0012.00-2.502.503.004.00-----
.................................................................................................................................................................................CTTTTATTTTATTTTATTTTCTAG.................................................246.000.00-1.002.003.00------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTCTAG.................................................256.000.00---2.003.001.00----
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTTAC.................................................255.000.005.00---------
...........................................................................................................................................ATTCTTTTTTTTTTTTTTTGCAGG.......................................................................................243.000.003.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTTTGG................................................263.000.003.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTTTCG................................................263.000.00--1.00-2.00-----
..........................................................................................................................................TATTCTTTTTTTTTTTTTTTGGGT........................................................................................243.000.003.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATTCTG....................................................223.000.00-3.00--------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTCTTG................................................263.000.00-3.00--------
.........................................................................................................................................ATATTCTTTTTTTTTCGAG..............................................................................................192.000.00-----2.00----
............................................................................................................................................................................TGTGACTTTTATTTTATTTTATTTTTTTG.................................................292.000.001.00----1.00----
.................................................................................................................................................................................CTTTTATTTTATTTTATTCTAG...................................................222.000.00-2.00--------
..........................................................................................................................................TATTCTTTTTTTTTTTTTTTGGGTT.......................................................................................252.000.002.00---------
.................................................................................................................................................................................CTTTTATTTTATTTTATTCC.....................................................202.000.00------2.00---
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTCTTT.................................................252.000.00-1.001.00-------
...........................................................................................................................................ATTCTTTTTTTTTTTTTTTGCTGG.......................................................................................242.000.001.00----1.00----
.................................................................................................................................................................................CTTTTATTTTATTTTATTCCAG...................................................222.000.00-2.00--------
...........................................................................................................................................ATTCTTTTTTTTTTTTTTTGCTGCG......................................................................................252.000.001.00----1.00----
..............................................................................................................................................................................TGACTTTTATTTTATTTTATTTTTTTG.................................................272.000.002.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTTTGC................................................262.000.002.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTCG...................................................232.000.00--2.00-------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTAGGG................................................262.000.002.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTCG....................................................222.000.00-1.001.00-------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTTCTG................................................262.000.00-1.001.00-------
................................................................................................................................................................................ACTTTTATTTTATTTTATTCA.....................................................211.000.001.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTTCCG................................................261.000.00----1.00-----
.............................................................................................................................................TCTTTTTTTTTTTTTTTGCGGTT......................................................................................231.000.001.00---------
.................................................................................................................................................................................CTTTTATTTTATTTTATTTTTCG..................................................231.000.00-1.00--------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTCATG.................................................251.000.00--1.00-------
........................................................................................................................................TATATTCTTTTTTTTTTTTTATTT..........................................................................................241.000.00--1.00-------
.................................................................................................................................................................................CTTTTATTTTATTTTATTTTCCTT.................................................241.000.00-1.00--------
.................................................................................................................................................................................CTTTTATTTTATTTTATTCTG....................................................211.000.00---1.00------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTCTGG................................................261.000.001.00---------
.................................................................................................................................................................................CTTTTATTTTATTTTATTTTTAAAG................................................251.000.00---1.00------
..............................................................................................................................................CTTTTTTTTTTTTTTTGCGTAG......................................................................................221.000.001.00---------
.....................................................................................................................................TTGTATATTCTTTTTTTTTTTTTATAG..........................................................................................271.000.00-1.00--------
..........................................................................................................................................TATTCTTTTTTTTTTTTTTTGGCTT.......................................................................................251.000.001.00---------
..............................................................................................................................................................................TGACTTTTATTTTATTTTATTTTTTTGC................................................281.000.001.00---------
.........................................................................................................................................ATATTCTTTTTTTTTTTTTTTGCGGGG......................................................................................271.000.001.00---------
........................................................................................................................................TATATTCTTTTTTTTTGGTG..............................................................................................201.000.001.00---------
..........................................................................................................................................TATTCTTTTTTTTTTTTTTTGCAGATG.....................................................................................271.000.00-----1.00----
......................................................................................................................................TGTATATTCTTTTTTTTTTTTTTCTGG.........................................................................................271.000.00-----1.00----
........................................................................................................................................TATATTCTTTTTTTTTTTTTTTATT.........................................................................................251.000.00----1.00-----
........................................................................................................................................TATATTCTTTTTTTTTTCCGG.............................................................................................211.000.00--1.00-------
................................................................................................................................................................................ACTTTTATTTTATTTTATATTA....................................................221.000.00---1.00------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTGCAG................................................261.000.00-----1.00----
..........................................................................................................................................TATTCTTTTTTTTTTTTTTTGCTG........................................................................................241.000.00--1.00-------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTATG.................................................251.000.00--1.00-------
........................................................................................................................................TATATTCTTTTTTTTTTTTTTTATAG........................................................................................261.000.00-1.00--------
.............................................................................................................................................TCTTTTTTTTTTTTTTTGCATTTTCCCC.................................................................................281.000.001.00---------
........................................................................................................................................TATATTCTTTTTTTTTTTTTCTTT..........................................................................................241.000.00--1.00-------
...........................................................................................................................................ATTCTTTTTTTTTTTTTTTGCAGGA......................................................................................251.000.00-----1.00----
............................................................................................................................................TTCTTTTTTTTTTTTTTTGCATCAAG....................................................................................261.000.00-----1.00----
........................................................................................................................................TATATTCTTTTTTTTTTCTAG.............................................................................................211.000.00-1.00--------
.................................................................................................................................................................................CTTTTATTTTATTTTATTTTCCAG.................................................241.000.00--1.00-------
.................................................................................................................................................................................CTTTTATTTTATTTTATTTCCG...................................................221.000.00--1.00-------
.................................................................................................................................................................................CTTTTATTTTATTTTATTTTCTTG.................................................241.000.00--1.00-------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTCCAG.................................................251.000.00--1.00-------
..................................................................................................................................................................................TTTTATTTTATTTTATTTTTACGAT...............................................251.000.00------1.00---
........................................................................................................................................TATATTCTTTTTTTTTAG................................................................................................181.000.00-1.00--------
.........................................................................................................................................ATATTCTTTTTTTTTTTTTTCGGC.........................................................................................241.000.001.00---------
.........................................................................................................................................ATATTCTTTTTTTTTTTTTTTGGGG........................................................................................251.000.001.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATGTCG....................................................221.000.00---1.00------
.............................................................................................................................................TCTTTTTTTTTTTTTTTGCACCCC.....................................................................................241.000.001.00---------
..........................................................................................................................................TATTCTTTTTTTTTTTTTTTGGGG........................................................................................241.000.001.00---------
.........................................................................................................................................ATATTCTTTTTTTTTTTTTTCAG..........................................................................................231.000.00-1.00--------
..............................................................................................................................................CTTTTTTTTTTTTTTTGCGGGC......................................................................................221.000.001.00---------
..........................................................TAAACACACAATAAATATTTC...........................................................................................................................................................................211.000.00------1.00---
..........................................................................................................................................TATTCTTTTTTTTTTTTTTTGGGGT.......................................................................................251.000.001.00---------
........................................................................................................................................TATATTCTTTTTTTTTTTTAAAG...........................................................................................231.000.00-1.00--------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTCAG...................................................231.000.001.00---------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTTCCC.................................................251.000.001.00---------
..........................................................................................................................................TATTCTTTTTTTTTTTTTTTGGCC........................................................................................241.000.001.00---------
.........................................................................................................................................ATATTCTTTTTTTTTTTTTTCCG..........................................................................................231.000.00--1.00-------
................................................................................................................................................................................ACTTTTATTTTATTTTATTTTCA...................................................231.000.00-1.00--------

Antisense strand
ATAATTGTAAAAAGTGAAAAAATGTATATCAAGAACTTGGCAAAGTATGTGGTAAAAATAAACACACAATAAATAGTGACAACAGTTATTTTTGAGTGAATGTTTTAACTTCTAGTTGGAGGGTGTTTATCAATTGTATATTCTTTTTTTTTTTTTTTGCATTTTACACCTGTGTGACTTTTATTTTATTTTATTTTTAGTTCCAGGATACATGTGCAGGATGTGCAAGTTTGCTACATGGGTAAATATG
...................................................................................................................................................................(((((....))))).........................................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR189784
.........................................................................................................................................................................CTGTGTGACTTTTATTCC............................................................... 181.000.00--------1.00-
......................................................................................................................................................................................................AGTTCCAGGATACATGCTGG................................ 201.000.00-------1.00--
........................................TTTACCACATACTTTG.................................................................................................................................................................................................. 1650.200.20---------0.20