ID: uc003iyz.2_intron_0_0_chr4_187187450_f.3p
GENE: (1)
chr4:187188090-187188339+


(2)
BREAST
(10)
CELL-LINE
(1)
CERVIX
(6)
LIVER
(1)
OTHER
(2)
SKIN

Sense strand
GAGTTGAATGCCACACACAGTCACACTAAGGAATGCTCCAGGATTGGGAAAGAAAATTCAACATTATAATGAGAACACTGTGAATGCTATTGAATTAACTACTCCCCTCTCTCCCTATTTCTTGTAAGTCTTAGTGTCAGTAAACTAATTATAAATTTACATTTTATGTTCTAAAAGCATGCACCTTTTTCTCATTGTAGGATGATTTTCTTATATCAAGTGGTACATTTCATTTTATTTACTTCAGTTT
......................................................................((((.....((((((........)))...))).....))))...........................................................................................................................................
...................................................................68........................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR029128(GSM416757)
H520. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM532880(GSM532880)
G659T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................GAACACTGTGAATGCACTG...............................................................................................................................................................19145.000.00131.006.002.004.00--1.00---------1.00------
........................................................................GAACACTGTGAATGCACT................................................................................................................................................................1856.000.0054.00-2.00--------------------
.......................................................................AGAACACTGTGAATGCACTG...............................................................................................................................................................203.000.002.00-----1.00----------------
.......................................................................AGAACACTGTGAATGCATC................................................................................................................................................................193.000.00-----3.00-----------------
....................................................................ATGAGAACACTGTGAATGCTATTGAA............................................................................................................................................................2612.002.00----2.00------------------
.......................................................................AGAACACTGTGAATGCTATTGA.............................................................................................................................................................2212.002.00-------2.00---------------
........................................................................GAACACTGTGAATGCCCTG...............................................................................................................................................................192.000.002.00----------------------
......................................................................................................................................................................................................AGGATGATTTTCTTATATCAAGT.............................2311.001.00----1.00------------------
...............................................................................................................................................................................................................................TACATTTCATTTTATTTTTTG......211.000.00--------1.00--------------
.......................................................................AGAACACTGTGAATGCAC.................................................................................................................................................................181.000.001.00----------------------
.......................................................................................................CCCCTCTCTCCCTATTTCT................................................................................................................................1911.001.00-----------------1.00-----
.................................................................................................................................................................................................................................CATTTCATTTTATTTACTTTTTG..231.000.00-------------------1.00---
................................................................................................................................................................................................................................ACATTTCATTTTATTTACATG.....211.000.00--------------------1.00--
.AGTTGAATGCCACACACAG......................................................................................................................................................................................................................................1911.001.00----------1.00------------
................................................................................................................................................................................................................................ACATTTCATTTTATTTACTTGCTT..241.000.00---------------1.00-------
.......................................................................AGAACACTGTGAATGCTATT...............................................................................................................................................................2011.001.00----1.00------------------
.......................................AGGATTGGGAAAGAAGAT.................................................................................................................................................................................................181.000.00---------------------1.00-
................................................................................................................................................................................................................................ACATTTCATTTTATTTTAG.......191.000.00--------1.00--------------
.......................................................................AGAACACTGTGAATGCACT................................................................................................................................................................191.000.001.00----------------------
.........................................................................................................................................................................TCTAAAAGCATGCACCTTTTTC...........................................................2211.001.00------------------1.00----
.......................................................................................................................................................................................................GGATGATTTTCTTATACAG................................191.000.00------------1.00----------

Antisense strand
GAGTTGAATGCCACACACAGTCACACTAAGGAATGCTCCAGGATTGGGAAAGAAAATTCAACATTATAATGAGAACACTGTGAATGCTATTGAATTAACTACTCCCCTCTCTCCCTATTTCTTGTAAGTCTTAGTGTCAGTAAACTAATTATAAATTTACATTTTATGTTCTAAAAGCATGCACCTTTTTCTCATTGTAGGATGATTTTCTTATATCAAGTGGTACATTTCATTTTATTTACTTCAGTTT
......................................................................((((.....((((((........)))...))).....))))...........................................................................................................................................
...................................................................68........................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR029128(GSM416757)
H520. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037936(GSM510474)
293cand1. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM532880(GSM532880)
G659T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......AGTGTGACTGTGTGTGGCATT............................................................................................................................................................................................................................... 2111.001.00-----------1.00-----------
.......................................................................................................................................................................GTTCTAAAAGCATGCGCTA................................................................ 191.000.00-------------1.00---------
...AGTGTGACTGTGTGTGGCATTCAA............................................................................................................................................................................................................................... 2411.001.00---------1.00-------------
.........................................................................................................................................................................................................................................TTTATTTACTTCAGTTTGCT 201.000.001.00----------------------
.................................................................................................................................................................TTTTATGTTCTAAAAATTT...................................................................... 191.000.00--------------1.00--------
.......................................................................................................................................................................TGCATGCTTTTAGAAC................................................................... 1630.330.33----------------------0.33